Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g08580.t01
CDS Infomation

cds chromosome:12X:9:9675807:9677525:-1 gene:VIT_09s0002g08580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACCTCCAACTCTAACCCACGCTTTGATGAGCTCAGGTGGGTGATTGAGATACGTAGG
ACTCTAGATGAAGAGCTTGAAGAAGATAGTGAAGTCCCCGTGAACATCTACAATGTGCCC
AAAACCCTAATGGCTGCTAAGCCGGATTGCTACGTTCCTCAAGAAGTTGCTCTGGGGCCT
TATCATCACTGGCAGCCGGAGCTCTATGAGATGGAGAGGTATAAGCTTGCAGCAGCGAAA
AGAACTCAAAAGCATCTCCAAAGAGTGAAGTTTGAAAGCCTTGTTGATCAGTTGAACAAG
CATGAGCCAAGGATTCGAGCTTGCTACCACAAGTTCTTGCAGTTCAATGGTGATACCTTA
GCGTGGATGATGGCTATTGATGCCTCTTTCTTGCTTGAGTTCCTTCAAGTCTATTCCATC
AAGGCGGGTTGGTTGCTGACCAGAGTTTCCTCCAGGATGTCACACCTAGTTGATTATGCC
GGGACCAAATCAGCTCATAATGCGATTCTTAGAGACATGGTGATGGTTGAGAATCAAATT
CCATTGTTTGTACTGAGGAAAGTGTTAGAATTTCAGTTCCCGACTTTAGATCAAGCTGAT
GATATGTTGCGTTCAATGTTAGCCGGGTTTGGTGAAGATCTTTGTCCGTTTCGGATGAAG
GAGGACTTGACCCAGGTCCACGTTGAGGAGCAAGCCCACCTGCTGGACTTTCTGTACCAT
ATCATCGTGCCAAGATCAAAAGAACCATCTGAAATAATTGAAGTAGAGAACGAAGATGAA
TCAAAGGAGGGCAAAGAAGGATCTTTTGGCGACTCCAGTTATGTGCAACAGCTATTTCAG
ATAATTTGGAATCTGCTCTCAACATCGAATCAAGGCCCAATAAGTCTTCTCAAGAGACTT
TTATCTTCCGATCCAGTAAAAGTCATACTGAAATTGCCTTGGAAAATCATCTTCAATCTC
CCCGGGTTTTCCATCTTGAAACGACCCGTCGAATATATCTTCTTTTCCCAAAAAAAAGAA
GAAAGCAATCCCGAAAACGGGAACTCCAACTCCAACAGTAACATCATCAAACCTCCGCTG
ATAGAGGAAATTGCCATCCCTTCAGTGTCGAAGCTCTATAAATCCGGTGTCCGCTTCTTA
CCTGCTAATGGTAGCATCTCATCCATCACTTTCGATGCTAAGATGGCCACTCTTTACCTC
CCTACTGTTAGTTTAGACGTAAACACAGAGGTCACTTTGAGAAACTTGGTTGCATATGAA
GCATCAAATGCATCAGGGCCACTGGTTATGACTCGGTACACTGAACTAATGAATGGGATA
ATTGATACGGAGGAAGATGCCAAGATTCTGAGAGAAAGAGGTATTATTTTGAACCGATTG
AAGAGTGATGAAGAGGTGGCCAACCTGTGGAATGGGATGAGCAAGTCCATAAGGTTGACA
AAGGTGCCCTTCTTAGATAAGGTGATTGAAGATGTGAACAACTATCACACTGGCATATGG
AAGGTTAAAGCCGGAAAGTTTATGAAGCGTTACGTGATTGGTTCATGGCAGCTCCTAACG
TTTGTCGCCACCGTTTTGATCTTCTTGTTAATGACATTGCAAGCATTTTGCTCTGTTTAT
AATTGTCCTCGAATGTTTCGTGTCACCACCGATCTGTAA

Peptide Sequence

PEP ID

VIT_09s0002g08580.t01
PEP Infomation

pep chromosome:12X:9:9675807:9677525:-1 gene:VIT_09s0002g08580 transcript:VIT_09s0002g08580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTSNSNPRFDELRWVIEIRRTLDEELEEDSEVPVNIYNVPKTLMAAKPDCYVPQEVALGP
YHHWQPELYEMERYKLAAAKRTQKHLQRVKFESLVDQLNKHEPRIRACYHKFLQFNGDTL
AWMMAIDASFLLEFLQVYSIKAGWLLTRVSSRMSHLVDYAGTKSAHNAILRDMVMVENQI
PLFVLRKVLEFQFPTLDQADDMLRSMLAGFGEDLCPFRMKEDLTQVHVEEQAHLLDFLYH
IIVPRSKEPSEIIEVENEDESKEGKEGSFGDSSYVQQLFQIIWNLLSTSNQGPISLLKRL
LSSDPVKVILKLPWKIIFNLPGFSILKRPVEYIFFSQKKEESNPENGNSNSNSNIIKPPL
IEEIAIPSVSKLYKSGVRFLPANGSISSITFDAKMATLYLPTVSLDVNTEVTLRNLVAYE
ASNASGPLVMTRYTELMNGIIDTEEDAKILRERGIILNRLKSDEEVANLWNGMSKSIRLT
KVPFLDKVIEDVNNYHTGIWKVKAGKFMKRYVIGSWQLLTFVATVLIFLLMTLQAFCSVY
NCPRMFRVTTDL

Transcript Sequence

Transcript ID

VIT_09s0002g08580.t01
Transcript Infomation

cdna chromosome:12X:9:9675807:9677525:-1 gene:VIT_09s0002g08580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACATTGAATTGCCAACTCCACCAAAAGGAAAAAACTTCCTTCTCTTCAATCCACCATGAC
CTCCAACTCTAACCCACGCTTTGATGAGCTCAGGTGGGTGATTGAGATACGTAGGACTCT
AGATGAAGAGCTTGAAGAAGATAGTGAAGTCCCCGTGAACATCTACAATGTGCCCAAAAC
CCTAATGGCTGCTAAGCCGGATTGCTACGTTCCTCAAGAAGTTGCTCTGGGGCCTTATCA
TCACTGGCAGCCGGAGCTCTATGAGATGGAGAGGTATAAGCTTGCAGCAGCGAAAAGAAC
TCAAAAGCATCTCCAAAGAGTGAAGTTTGAAAGCCTTGTTGATCAGTTGAACAAGCATGA
GCCAAGGATTCGAGCTTGCTACCACAAGTTCTTGCAGTTCAATGGTGATACCTTAGCGTG
GATGATGGCTATTGATGCCTCTTTCTTGCTTGAGTTCCTTCAAGTCTATTCCATCAAGGC
GGGTTGGTTGCTGACCAGAGTTTCCTCCAGGATGTCACACCTAGTTGATTATGCCGGGAC
CAAATCAGCTCATAATGCGATTCTTAGAGACATGGTGATGGTTGAGAATCAAATTCCATT
GTTTGTACTGAGGAAAGTGTTAGAATTTCAGTTCCCGACTTTAGATCAAGCTGATGATAT
GTTGCGTTCAATGTTAGCCGGGTTTGGTGAAGATCTTTGTCCGTTTCGGATGAAGGAGGA
CTTGACCCAGGTCCACGTTGAGGAGCAAGCCCACCTGCTGGACTTTCTGTACCATATCAT
CGTGCCAAGATCAAAAGAACCATCTGAAATAATTGAAGTAGAGAACGAAGATGAATCAAA
GGAGGGCAAAGAAGGATCTTTTGGCGACTCCAGTTATGTGCAACAGCTATTTCAGATAAT
TTGGAATCTGCTCTCAACATCGAATCAAGGCCCAATAAGTCTTCTCAAGAGACTTTTATC
TTCCGATCCAGTAAAAGTCATACTGAAATTGCCTTGGAAAATCATCTTCAATCTCCCCGG
GTTTTCCATCTTGAAACGACCCGTCGAATATATCTTCTTTTCCCAAAAAAAAGAAGAAAG
CAATCCCGAAAACGGGAACTCCAACTCCAACAGTAACATCATCAAACCTCCGCTGATAGA
GGAAATTGCCATCCCTTCAGTGTCGAAGCTCTATAAATCCGGTGTCCGCTTCTTACCTGC
TAATGGTAGCATCTCATCCATCACTTTCGATGCTAAGATGGCCACTCTTTACCTCCCTAC
TGTTAGTTTAGACGTAAACACAGAGGTCACTTTGAGAAACTTGGTTGCATATGAAGCATC
AAATGCATCAGGGCCACTGGTTATGACTCGGTACACTGAACTAATGAATGGGATAATTGA
TACGGAGGAAGATGCCAAGATTCTGAGAGAAAGAGGTATTATTTTGAACCGATTGAAGAG
TGATGAAGAGGTGGCCAACCTGTGGAATGGGATGAGCAAGTCCATAAGGTTGACAAAGGT
GCCCTTCTTAGATAAGGTGATTGAAGATGTGAACAACTATCACACTGGCATATGGAAGGT
TAAAGCCGGAAAGTTTATGAAGCGTTACGTGATTGGTTCATGGCAGCTCCTAACGTTTGT
CGCCACCGTTTTGATCTTCTTGTTAATGACATTGCAAGCATTTTGCTCTGTTTATAATTG
TCCTCGAATGTTTCGTGTCACCACCGATCTGTAATGTTT