Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g06550.t01
CDS Infomation

cds chromosome:12X:9:6477350:6485640:-1 gene:VIT_09s0002g06550 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:D7U104]
Sequence

ATGGGTTGGATCGGAGAGACCGTCGATTCTATTAAATCCATTCAGATCCGGCAGGTGCTC
AGCCAGGCTGTCAGTCTCGGTATGATCGTTACATCTGCACTGATTATATGGAAGGCATTG
ATGTGCATTACTGGCAGCGAATCTCCTGTTGTTGTTGTTCTTTCTGGAAGCATGGAGCCG
GGCTTCAAGAGGGGGGACATTTTGTTCTTACACATGAGTAAAGATCCTATTCGTGCAGGG
GAAATTGTTGTGTTTAATGTAGATGGTCGTGAAATACCAATTGTTCACCGTGTAATTAAG
GTTCACGAACGGCAAGATACTGGAGAAGTTGATGTCCTCACAAAAGGGGATAACAATTAT
GGGGATGACAGGCTTTTGTACGCCCATGGTCAGCTCTGGCTTCAGCGGCACCATATTATG
GGGAGGGCTGTGGGCTTCTTACCTTATGTCGGCTGGGTGACAATCATCATGACAGAAAAG
CCGCTTATCAAGTATGTTCTCATCGGTGCACTGGGATTGCTCGTTATAACTTCAAAGGAC
TAA

Peptide Sequence

PEP ID

VIT_09s0002g06550.t01
PEP Infomation

pep chromosome:12X:9:6477350:6485640:-1 gene:VIT_09s0002g06550 transcript:VIT_09s0002g06550.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:D7U104]
Sequence

MGWIGETVDSIKSIQIRQVLSQAVSLGMIVTSALIIWKALMCITGSESPVVVVLSGSMEP
GFKRGDILFLHMSKDPIRAGEIVVFNVDGREIPIVHRVIKVHERQDTGEVDVLTKGDNNY
GDDRLLYAHGQLWLQRHHIMGRAVGFLPYVGWVTIIMTEKPLIKYVLIGALGLLVITSKD

Transcript Sequence

Transcript ID

VIT_09s0002g06550.t01
Transcript Infomation

cdna chromosome:12X:9:6477350:6485640:-1 gene:VIT_09s0002g06550 gene_biotype:protein_coding transcript_biotype:protein_coding description:Signal peptidase I [Source:UniProtKB/TrEMBL;Acc:D7U104]
Sequence

AGTCTCGACGGTGCACCCAGTTTTGCGTTTGGCCGCCGAGAAAACCCAGAGGAAAGGAAA
ACGTGAGAAAAGAAAACATGGGTTGGATCGGAGAGACCGTCGATTCTATTAAATCCATTC
AGATCCGGCAGGTGCTCAGCCAGGCTGTCAGTCTCGGTATGATCGTTACATCTGCACTGA
TTATATGGAAGGCATTGATGTGCATTACTGGCAGCGAATCTCCTGTTGTTGTTGTTCTTT
CTGGAAGCATGGAGCCGGGCTTCAAGAGGGGGGACATTTTGTTCTTACACATGAGTAAAG
ATCCTATTCGTGCAGGGGAAATTGTTGTGTTTAATGTAGATGGTCGTGAAATACCAATTG
TTCACCGTGTAATTAAGGTTCACGAACGGCAAGATACTGGAGAAGTTGATGTCCTCACAA
AAGGGGATAACAATTATGGGGATGACAGGCTTTTGTACGCCCATGGTCAGCTCTGGCTTC
AGCGGCACCATATTATGGGGAGGGCTGTGGGCTTCTTACCTTATGTCGGCTGGGTGACAA
TCATCATGACAGAAAAGCCGCTTATCAAGTATGTTCTCATCGGTGCACTGGGATTGCTCG
TTATAACTTCAAAGGACTAAGAATGAAGTTCAAGATGTGGGGAATCCCTCAAGAAACCCA
TCAACAAGTCTCCTTGTCTCTTCTCATCCTGTCTACACAAAACCAAGGAATAGTTGGTTG
ATTTTTGATATGATAACTTAAATTTGTTGATGTGGAAGTTTTAGGTTGAAGTATTTAAGA
GCTAACCCATAACCATTTGAACTTAATTTTCTGATTACATAAATGTTGGTCTTGGTTGAG
G