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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g06390.t01
CDS Infomation

cds chromosome:12X:9:6294173:6300771:-1 gene:VIT_09s0002g06390 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptide deformylase [Source:UniProtKB/TrEMBL;Acc:D7U0Y9]
Sequence

ATGGAGAGCATTAGTCGATTCTCACAGCGTCTCCTCCCGACATGTCTCGCTGAAAACTGC
CTCATAAACCCGATAACCTCTCCATTCCGGCTGATCCCATCTCTCCAATTCCATCCAACC
CTCATACCCACTTCCAAACCGGGTCCCTCAGACCCGAATCGCATCTTCTCAACCAGAAAA
ACCTACAGACCTTCTTCTTCGTCATCTACTTTAATTGCCAGTGCGGGTTGGATTCTGGGT
CTCGGAGATAAGAAGCCCGCATTGCCCGAAATTGTAAAGGCTGGCGACCCAGTTCTTCAT
GAATCAGCGCAGGAAGTTGAACCGGGAGAAATCGGGTCGGATAGGATTCAGAAAATTATT
GATGATATGATTAAGGCGATGAGAACGGCACCTGGGGTTGGTCTTGCTGCTCCTCAGATT
GGAATTCCCTTAAGGATTATCGTTTTGGAAGACACAAAAGAATATATTAGTTATGACCGA
AAGGATGTGATTAAAGCACAAGAGAGACGCCCTTTTGATCTTCTGGTTATCCTGAATCCA
AAGCTTAGAAAGAAGGGTAACAGAACTGCATTCTTTTTCGAAGGGTGTCTGAGTGTTGAT
GGATTCAGAGCTGTGGTGGAGCGACACTTACAGGTTGAGGTTACAGGTCTGAGTCGTAAT
GGAAAGCCCATCAAAGTAGATGCTTCAGGCTGGAAGGCGCGCATATTACAGCATGAGTGT
GATCATTTGGATGGAACTCTCTATGTTGACAAGATGGTTCCAAGAACGTTTAGAACAGTA
CAAAACATCGACTTACCCCTTGCTGTTGGGTGCCCCAAGCTTGGTGCCCGCTAG

Peptide Sequence

PEP ID

VIT_09s0002g06390.t01
PEP Infomation

pep chromosome:12X:9:6294173:6300771:-1 gene:VIT_09s0002g06390 transcript:VIT_09s0002g06390.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptide deformylase [Source:UniProtKB/TrEMBL;Acc:D7U0Y9]
Sequence

MESISRFSQRLLPTCLAENCLINPITSPFRLIPSLQFHPTLIPTSKPGPSDPNRIFSTRK
TYRPSSSSSTLIASAGWILGLGDKKPALPEIVKAGDPVLHESAQEVEPGEIGSDRIQKII
DDMIKAMRTAPGVGLAAPQIGIPLRIIVLEDTKEYISYDRKDVIKAQERRPFDLLVILNP
KLRKKGNRTAFFFEGCLSVDGFRAVVERHLQVEVTGLSRNGKPIKVDASGWKARILQHEC
DHLDGTLYVDKMVPRTFRTVQNIDLPLAVGCPKLGAR

Transcript Sequence

Transcript ID

VIT_09s0002g06390.t01
Transcript Infomation

cdna chromosome:12X:9:6294173:6300771:-1 gene:VIT_09s0002g06390 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptide deformylase [Source:UniProtKB/TrEMBL;Acc:D7U0Y9]
Sequence

TAGAGCAGAGCAATGGAGAGCATTAGTCGATTCTCACAGCGTCTCCTCCCGACATGTCTC
GCTGAAAACTGCCTCATAAACCCGATAACCTCTCCATTCCGGCTGATCCCATCTCTCCAA
TTCCATCCAACCCTCATACCCACTTCCAAACCGGGTCCCTCAGACCCGAATCGCATCTTC
TCAACCAGAAAAACCTACAGACCTTCTTCTTCGTCATCTACTTTAATTGCCAGTGCGGGT
TGGATTCTGGGTCTCGGAGATAAGAAGCCCGCATTGCCCGAAATTGTAAAGGCTGGCGAC
CCAGTTCTTCATGAATCAGCGCAGGAAGTTGAACCGGGAGAAATCGGGTCGGATAGGATT
CAGAAAATTATTGATGATATGATTAAGGCGATGAGAACGGCACCTGGGGTTGGTCTTGCT
GCTCCTCAGATTGGAATTCCCTTAAGGATTATCGTTTTGGAAGACACAAAAGAATATATT
AGTTATGACCGAAAGGATGTGATTAAAGCACAAGAGAGACGCCCTTTTGATCTTCTGGTT
ATCCTGAATCCAAAGCTTAGAAAGAAGGGTAACAGAACTGCATTCTTTTTCGAAGGGTGT
CTGAGTGTTGATGGATTCAGAGCTGTGGTGGAGCGACACTTACAGGTTGAGGTTACAGGT
CTGAGTCGTAATGGAAAGCCCATCAAAGTAGATGCTTCAGGCTGGAAGGCGCGCATATTA
CAGCATGAGTGTGATCATTTGGATGGAACTCTCTATGTTGACAAGATGGTTCCAAGAACG
TTTAGAACAGTACAAAACATCGACTTACCCCTTGCTGTTGGGTGCCCCAAGCTTGGTGCC
CGCTAGCTCATGGTTTCCAAACTGAACATTCCCTCTAAAATACTTAGAAGTTTCGAAATC
CATTGTCATGGGACTCCATAGAAATGAGCTGTTCTATGCTTCTGGGTGACGTCCATTGGA
TATGAACATTCTTTATTCCCAAATGTTGAGGAAACTGATTTTGTTTGACAATGTTTCCAA
CAGTAGATGGATAATGTTGATGGCTTCAGAGCAATTGTAACTGTTATTTTCTTGTTTTCA
ATGAAATTGGCATTGAGATTCA