Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g05990.t01
CDS Infomation

cds chromosome:12X:9:5800008:5806521:1 gene:VIT_09s0002g05990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCATCAGGGTCGAGTTCTCTGATGTGGTTCCGGAAAGGGCTTCGAATCCACGACAAC
CCGGCTCTGCAGCACGCAGCTAAGGAGTCGAATTGCGTGTACCCTGTGTTTGTGATAGAC
CCCTATTTCATGGAGCCTGACCCGAATGCATTCTCTCCGGGGTCGTCGCGGGCTGGCCTG
AACCGAATCCGGTTCTTACTGGAGAGTTTGGTGGATCTTGATTCTAGTCTCCGGCAGCTG
GGTTCGCGCTTGTTGGTTCTGAAGGGAGACCCCGGCGAGGTTATAATTCGGTGTTTGAAG
GAGTGGGAGGTGAAAAGGCTTTGCTTTGAGTATGACACAGACCCGTACTACCAAGCTTTA
GACATTAAAGTTAAGAATTATGCTTCTGCTGCTGGAATTGAGGTTTTCTCTCCTGTGAGT
CATACTCTCTTCGATTCTGCAGAAATCATACAAAAGAATGGGGGAAGGCCACCATTGAGT
TATCAATCATTTTTGAAGCTTGCCGGGCAACCCTCATGGGCATCATCCCCACTCTTAACC
ACACTTTCCTGGCTTCCACCAGTAGGAGATGTTGGAACTTGTGAAATTTCAAATGTTCCA
ACTGTTAAAGAACTTGGCTATGAAGAGATTGGACAGGATGAATCGACTCCTTTCAAAGGT
GGTGAATCAGAAGCATTGAAGAGATTGAGAGAGTCAATTCGTGACAAGGAATGGGTGGCC
AACTTTGAGAAACCAAAGGGCGACCCATCTGCATTTCTGAAACCGGCTACAACTGTTCTA
TCACCTTATCTGAAATTTGGTTGTCTATCTTCCAGATACTTTTATCAGTGCCTTACAGAT
GTTTACAAGAATATGAAATGGCACACATCACCACCAGTTTCACTTGTTGGACAGTTGTTA
TGGCGAGATTTCTTCTACACCGTGGGTTTTGGTACTCCTAATTTTGATCGCATGAAGGGC
AACAGAATATGCAAGCAGATACCTTGGAATGATGATGATGAACTGCTGGCAGCATGGAGA
GAAGCCAGGACAGGATATCCTTGGATTGATGCTATCATGGTCCAGCTGAGGAAGTGGGGT
TGGATGCACCATCTTGCACGGCATTGTGTTGCATGTTTTCTAACTCGTGGGGACCTGTTC
GTTCATTGGGAAAAAGGACGAGATGTTTTTGAGAGGCTCCTGATTGATTCAGATTGGGCG
ATTAATAATGGGAACTGGCTATGGCTATCATGCTCCTCATTTTTCTACCAGTATAATCGT
ATCTACTCCCCAATCTCTTTTGGAAAGAAATATGACCCCAATGGTAATTATATAAGGCAT
TTTCTCCCCATCCTGAAAGATATGCCAAAGGAGTATATTTATGAGCCGTGGACAGCTCCA
CCAAGCATCCAAGCCAAAGCGAAGTGCATAATTGGAAAAGATTATCCAAAACCAGTGGTT
TGCCATGATTCTGCAATCAAAGAGTGCAAGAGAAAGTTGGCAGAAGCCTATGCATTGAAC
AAAAGGTTAGACGGCTCGGTGACCGAAGAAGATCTGAAAAAGTTGAGGAGAAAATTGGAG
GAAGATGAGAACCCAGAATCCAACACTAGCAGGACAAGACAAAAGTTAATTGGCTGA

Peptide Sequence

PEP ID

VIT_09s0002g05990.t01
PEP Infomation

pep chromosome:12X:9:5800008:5806521:1 gene:VIT_09s0002g05990 transcript:VIT_09s0002g05990.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASGSSSLMWFRKGLRIHDNPALQHAAKESNCVYPVFVIDPYFMEPDPNAFSPGSSRAGL
NRIRFLLESLVDLDSSLRQLGSRLLVLKGDPGEVIIRCLKEWEVKRLCFEYDTDPYYQAL
DIKVKNYASAAGIEVFSPVSHTLFDSAEIIQKNGGRPPLSYQSFLKLAGQPSWASSPLLT
TLSWLPPVGDVGTCEISNVPTVKELGYEEIGQDESTPFKGGESEALKRLRESIRDKEWVA
NFEKPKGDPSAFLKPATTVLSPYLKFGCLSSRYFYQCLTDVYKNMKWHTSPPVSLVGQLL
WRDFFYTVGFGTPNFDRMKGNRICKQIPWNDDDELLAAWREARTGYPWIDAIMVQLRKWG
WMHHLARHCVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNR
IYSPISFGKKYDPNGNYIRHFLPILKDMPKEYIYEPWTAPPSIQAKAKCIIGKDYPKPVV
CHDSAIKECKRKLAEAYALNKRLDGSVTEEDLKKLRRKLEEDENPESNTSRTRQKLIG

Transcript Sequence

Transcript ID

VIT_09s0002g05990.t01
Transcript Infomation

cdna chromosome:12X:9:5800008:5806521:1 gene:VIT_09s0002g05990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCCGAACCCGTCAATGGCATCAGGGTCGAGTTCTCTGATGTGGTTCCGGAAAGGGCTTCG
AATCCACGACAACCCGGCTCTGCAGCACGCAGCTAAGGAGTCGAATTGCGTGTACCCTGT
GTTTGTGATAGACCCCTATTTCATGGAGCCTGACCCGAATGCATTCTCTCCGGGGTCGTC
GCGGGCTGGCCTGAACCGAATCCGGTTCTTACTGGAGAGTTTGGTGGATCTTGATTCTAG
TCTCCGGCAGCTGGGTTCGCGCTTGTTGGTTCTGAAGGGAGACCCCGGCGAGGTTATAAT
TCGGTGTTTGAAGGAGTGGGAGGTGAAAAGGCTTTGCTTTGAGTATGACACAGACCCGTA
CTACCAAGCTTTAGACATTAAAGTTAAGAATTATGCTTCTGCTGCTGGAATTGAGGTTTT
CTCTCCTGTGAGTCATACTCTCTTCGATTCTGCAGAAATCATACAAAAGAATGGGGGAAG
GCCACCATTGAGTTATCAATCATTTTTGAAGCTTGCCGGGCAACCCTCATGGGCATCATC
CCCACTCTTAACCACACTTTCCTGGCTTCCACCAGTAGGAGATGTTGGAACTTGTGAAAT
TTCAAATGTTCCAACTGTTAAAGAACTTGGCTATGAAGAGATTGGACAGGATGAATCGAC
TCCTTTCAAAGGTGGTGAATCAGAAGCATTGAAGAGATTGAGAGAGTCAATTCGTGACAA
GGAATGGGTGGCCAACTTTGAGAAACCAAAGGGCGACCCATCTGCATTTCTGAAACCGGC
TACAACTGTTCTATCACCTTATCTGAAATTTGGTTGTCTATCTTCCAGATACTTTTATCA
GTGCCTTACAGATGTTTACAAGAATATGAAATGGCACACATCACCACCAGTTTCACTTGT
TGGACAGTTGTTATGGCGAGATTTCTTCTACACCGTGGGTTTTGGTACTCCTAATTTTGA
TCGCATGAAGGGCAACAGAATATGCAAGCAGATACCTTGGAATGATGATGATGAACTGCT
GGCAGCATGGAGAGAAGCCAGGACAGGATATCCTTGGATTGATGCTATCATGGTCCAGCT
GAGGAAGTGGGGTTGGATGCACCATCTTGCACGGCATTGTGTTGCATGTTTTCTAACTCG
TGGGGACCTGTTCGTTCATTGGGAAAAAGGACGAGATGTTTTTGAGAGGCTCCTGATTGA
TTCAGATTGGGCGATTAATAATGGGAACTGGCTATGGCTATCATGCTCCTCATTTTTCTA
CCAGTATAATCGTATCTACTCCCCAATCTCTTTTGGAAAGAAATATGACCCCAATGGTAA
TTATATAAGGCATTTTCTCCCCATCCTGAAAGATATGCCAAAGGAGTATATTTATGAGCC
GTGGACAGCTCCACCAAGCATCCAAGCCAAAGCGAAGTGCATAATTGGAAAAGATTATCC
AAAACCAGTGGTTTGCCATGATTCTGCAATCAAAGAGTGCAAGAGAAAGTTGGCAGAAGC
CTATGCATTGAACAAAAGGTTAGACGGCTCGGTGACCGAAGAAGATCTGAAAAAGTTGAG
GAGAAAATTGGAGGAAGATGAGAACCCAGAATCCAACACTAGCAGGACAAGACAAAAGTT
AATTGGCTGAACTCCTGGTTATTGTTTTCTCAGCTGGCAAGCCTGACACAATGCGGGACG
GACTATGACATGCACCATCGCTGGGGTGGGAACAATGGGTAATAACCATCTGACTTACGA
ACTTAGCAACAGACTCAAGGTATCTTCTCTTCATGAGAAACCCTCACTTGACTCAGTTGT
CCATTTTGTTATGAAAATGCTCTCTATGTGGTATATACAGAGCCCTGTGTCACTAAGAAC
AGTTGTTTAGCATCAATTTTATGGTTTTTGGGAT