Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g05980.t01
CDS Infomation

cds chromosome:12X:9:5785899:5788706:1 gene:VIT_09s0002g05980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGAATACTTCTTGCAGTGGTTTTGGCCTCTCTTCTCATTCATGGCTCTAGTGTTT
GTGTTGAAGGTTGTGGATTATCTTTGGTGGAGACCCAAGAGAATTGAGAAACACTTCTCC
AAGCAAGGTATCAGAGGACCCCCATATCAGTTCTTCATAGGCAACATAAAGGAGATTGTG
GGGCTGACCTTGAAGACTTCATCTCAGCCCATGCCTCTCTCTGATCACAACATCCTCCCC
AGAGTTCTTTCCTTCTATCATCACTGGAAGAAAATCTATGGTGCAACCTTCCTGGTATGG
TTTGGACCGACATCTCGCGTCACCATCTCAGATCCAGTACTCATTCGAGAAATATTTATC
TCCAAAGCAGAATTCTATGAGAAAAATGAGTCACACCCTCTTGTCAGAAAGCTTGAAGGT
GATGGCTTGTTGACCCTCCAAGGAGAAAAATGGGCTCACCATAGAAAGATCATCTCACCA
ACCTTTCACATGGAGAATGTCAAACTAATGATTCCAACCATGGGAAAAACCATGGCGGCA
ATGTTGGACAAGTGGTCAACAATGGCGAATTCAGACGAGGTGGAGATCGAAGTCTCAGAA
TGGTTTCAAAGATTGACTGAAGAAGTGGTTACCAGAACAGTCTTTGGGACCAGCTATGAA
GATGGAAAATCAATTTTCCAGTTGCAAGCCCAACAAATGGTATCTGCCATAGAGTCCTTT
CAAAAGGTCTTCATCTCTACGTACAGATTCCTTCCCACCAAAAAGAACAGAGATTCTTGG
AAATTGGATAAAGAAATCTCAAAATCTTTAGTAGAACTCATAGAGCGGAGGAGAAAATAT
CCAGTGGCAAATTCATGCTCGGAAGATTTGTTGGAGGTGATGATCAGGGCAAGTATAATG
GAAGATAATATTGAAACAATAAACTCCAATTCTTCGGTTTCTTCTTCTTCTTCTTCTTCT
TCGTCGTCGTCATCTCCGATCACAGTTTTTGACATTGTTGAAGAATGCAAGAGCTTTTTC
TTCGCCGGAAAACATACGACGGCGAATTTGTTGACATGGACAACAATTCTCCTAGCAATG
CACCCTCAATGGCAAAAATTGGCTAGGGAAGAGGTCTTGAGAGTGTGTGGGGCACGTGAC
ATCCCAAGCAAAGATGATTTTTCAAAGCTTAAGACGCTGGGTATGATCCTGAACGAGTCA
CTGAGACTGTACCCACCAGCAGTGGCCACGATCAGACGGGCCAAAGCTGATGTTCATCTT
GGAGGGTGTATGATGATCCCTCGTGGGACCGAGCTCCTCATCCCCATCTTAGCCGTCCAT
CACGACCCAGGGCTGTGGGGCCAAGATGCCAATGAATTCAACCCCGCTCGATTCTCGCAA
GGTGTGGCCCACGCTGCCAAGCATCCCATGGCATTCCTACCCTTCGGGCTTGGTGCCCGC
AGGTGCATCGGCCAAAACCTAGCCATTTTGCAGACGAAATTGGCCATGGCTATGATCCTG
CAACGCTTCTCTTTCAGTCTGGCTCCCACCTACCAACATGCACCAATGGTTCTAATGCTC
CTACATCCACAGTCTGGTGCACCCATAATTTTTCGTGAATTATCAGACACCATGAACTAT
TCATAG

Peptide Sequence

PEP ID

VIT_09s0002g05980.t01
PEP Infomation

pep chromosome:12X:9:5785899:5788706:1 gene:VIT_09s0002g05980 transcript:VIT_09s0002g05980.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEEYFLQWFWPLFSFMALVFVLKVVDYLWWRPKRIEKHFSKQGIRGPPYQFFIGNIKEIV
GLTLKTSSQPMPLSDHNILPRVLSFYHHWKKIYGATFLVWFGPTSRVTISDPVLIREIFI
SKAEFYEKNESHPLVRKLEGDGLLTLQGEKWAHHRKIISPTFHMENVKLMIPTMGKTMAA
MLDKWSTMANSDEVEIEVSEWFQRLTEEVVTRTVFGTSYEDGKSIFQLQAQQMVSAIESF
QKVFISTYRFLPTKKNRDSWKLDKEISKSLVELIERRRKYPVANSCSEDLLEVMIRASIM
EDNIETINSNSSVSSSSSSSSSSSSPITVFDIVEECKSFFFAGKHTTANLLTWTTILLAM
HPQWQKLAREEVLRVCGARDIPSKDDFSKLKTLGMILNESLRLYPPAVATIRRAKADVHL
GGCMMIPRGTELLIPILAVHHDPGLWGQDANEFNPARFSQGVAHAAKHPMAFLPFGLGAR
RCIGQNLAILQTKLAMAMILQRFSFSLAPTYQHAPMVLMLLHPQSGAPIIFRELSDTMNY
S

Transcript Sequence

Transcript ID

VIT_09s0002g05980.t01
Transcript Infomation

cdna chromosome:12X:9:5785899:5788706:1 gene:VIT_09s0002g05980 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCATTGAAAGATAAACAAAGAAGCAA
GTATGGAGGAATACTTCTTGCAGTGGTTTTGGCCTCTCTTCTCATTCATGGCTCTAGTGT
TTGTGTTGAAGGTTGTGGATTATCTTTGGTGGAGACCCAAGAGAATTGAGAAACACTTCT
CCAAGCAAGGTATCAGAGGACCCCCATATCAGTTCTTCATAGGCAACATAAAGGAGATTG
TGGGGCTGACCTTGAAGACTTCATCTCAGCCCATGCCTCTCTCTGATCACAACATCCTCC
CCAGAGTTCTTTCCTTCTATCATCACTGGAAGAAAATCTATGGTGCAACCTTCCTGGTAT
GGTTTGGACCGACATCTCGCGTCACCATCTCAGATCCAGTACTCATTCGAGAAATATTTA
TCTCCAAAGCAGAATTCTATGAGAAAAATGAGTCACACCCTCTTGTCAGAAAGCTTGAAG
GTGATGGCTTGTTGACCCTCCAAGGAGAAAAATGGGCTCACCATAGAAAGATCATCTCAC
CAACCTTTCACATGGAGAATGTCAAACTAATGATTCCAACCATGGGAAAAACCATGGCGG
CAATGTTGGACAAGTGGTCAACAATGGCGAATTCAGACGAGGTGGAGATCGAAGTCTCAG
AATGGTTTCAAAGATTGACTGAAGAAGTGGTTACCAGAACAGTCTTTGGGACCAGCTATG
AAGATGGAAAATCAATTTTCCAGTTGCAAGCCCAACAAATGGTATCTGCCATAGAGTCCT
TTCAAAAGGTCTTCATCTCTACGTACAGATTCCTTCCCACCAAAAAGAACAGAGATTCTT
GGAAATTGGATAAAGAAATCTCAAAATCTTTAGTAGAACTCATAGAGCGGAGGAGAAAAT
ATCCAGTGGCAAATTCATGCTCGGAAGATTTGTTGGAGGTGATGATCAGGGCAAGTATAA
TGGAAGATAATATTGAAACAATAAACTCCAATTCTTCGGTTTCTTCTTCTTCTTCTTCTT
CTTCGTCGTCGTCATCTCCGATCACAGTTTTTGACATTGTTGAAGAATGCAAGAGCTTTT
TCTTCGCCGGAAAACATACGACGGCGAATTTGTTGACATGGACAACAATTCTCCTAGCAA
TGCACCCTCAATGGCAAAAATTGGCTAGGGAAGAGGTCTTGAGAGTGTGTGGGGCACGTG
ACATCCCAAGCAAAGATGATTTTTCAAAGCTTAAGACGCTGGGTATGATCCTGAACGAGT
CACTGAGACTGTACCCACCAGCAGTGGCCACGATCAGACGGGCCAAAGCTGATGTTCATC
TTGGAGGGTGTATGATGATCCCTCGTGGGACCGAGCTCCTCATCCCCATCTTAGCCGTCC
ATCACGACCCAGGGCTGTGGGGCCAAGATGCCAATGAATTCAACCCCGCTCGATTCTCGC
AAGGTGTGGCCCACGCTGCCAAGCATCCCATGGCATTCCTACCCTTCGGGCTTGGTGCCC
GCAGGTGCATCGGCCAAAACCTAGCCATTTTGCAGACGAAATTGGCCATGGCTATGATCC
TGCAACGCTTCTCTTTCAGTCTGGCTCCCACCTACCAACATGCACCAATGGTTCTAATGC
TCCTACATCCACAGTCTGGTGCACCCATAATTTTTCGTGAATTATCAGACACCATGAACT
ATTCATAG