Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g05790.t01
CDS Infomation

cds chromosome:12X:9:5571375:5583914:-1 gene:VIT_09s0002g05790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATAAGAAGAAAGTGGCGGTGCCCCTCGTATGCCACGGGCATTCCCGGCCCGTCGTT
GACTTGTTTTACAGTCCTGTCACTCCTGATGGGTTCTTCCTCATCAGTGCCAGCAAGGAT
TCTACTCCAATGCTGAGGAATGGGGAGACTGGGGATTGGATTGGAACCTTTGAAGGACAT
AAAGGTGCTGTTTGGAGTTGCAGCCTAGATACTAATGCTTTACGTGCTGCATCTGGCTCT
GCAGATTTTACTGCGAAATTGTGGGATGCATTGACTGGGGACGAATTGCACTCTTTTGAA
CACAAGCACATTGTTCGGGCATGTGCCTTCTCAGAGGATACACACTTCCTACTCACTGGT
GGAGTTGAAAAGGTACTTCGTATATTTGATCTGAATCGCCCTGATGCACCTCCTAGAGAG
GTTGAAAATTCACCTGGTTCAATCAGAACAGTTGCCTGGCTTCATAGCGACCAGACAATT
TTGAGTTCCTGTACTGATAACGGGGGTGTGAGGTTATGGGATGTGAGAACTGGCAAAATT
GTTCACACACTTGAGACCAAGTCACCTGTAACCAGCGCTGAAGTGAGTCAGGATGGCCGC
TACATAACAACTGCAGATGGGACTACTGTTAAGTTTTGGGATGCAAATCATTATGGATTA
GTGAAAAGCTACAACATGCCCTGCAACATGGAATCGGCTTCATTGGAACCAAAGTTTGGC
AATAAGTTCATTGCTGGAGGAGAAGATATGTGGATTCATATGTTTGATTTCAATACCGGG
GAAGAGATTGGATGCAACAAGGGTCACCATGGCCCTGTACACTGTGTGCGTTTCTCGCCC
GGGGGTGAATCTTATGCGTCAGGATCCGAAGATGGAACCATTAGAATTTGGCAGACAGGC
CCTCAGAATCTTGAAGAACCAGACAGCTTTGTGTCTGGGAAGGTCAAGGTTGTGGTCGAT
GAGGTTACCCGCAAGGTTGAGGGATTTCATGTTGGCAAAGACGGGAAAACTGGAAACAAG
GAGAAGGCCTTAGATGGCTAA

Peptide Sequence

PEP ID

VIT_09s0002g05790.t01
PEP Infomation

pep chromosome:12X:9:5571375:5583914:-1 gene:VIT_09s0002g05790 transcript:VIT_09s0002g05790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDKKKVAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSTPMLRNGETGDWIGTFEGH
KGAVWSCSLDTNALRAASGSADFTAKLWDALTGDELHSFEHKHIVRACAFSEDTHFLLTG
GVEKVLRIFDLNRPDAPPREVENSPGSIRTVAWLHSDQTILSSCTDNGGVRLWDVRTGKI
VHTLETKSPVTSAEVSQDGRYITTADGTTVKFWDANHYGLVKSYNMPCNMESASLEPKFG
NKFIAGGEDMWIHMFDFNTGEEIGCNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTG
PQNLEEPDSFVSGKVKVVVDEVTRKVEGFHVGKDGKTGNKEKALDG

Transcript Sequence

Transcript ID

VIT_09s0002g05790.t01
Transcript Infomation

cdna chromosome:12X:9:5571375:5583914:-1 gene:VIT_09s0002g05790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATAGTTCAATTTTTTTTCCTTTTTATTTTTTTCTTTTTTTATTTTCCAATATTTTCTATT
TTCCATTACAGACCAAACTGCCTATTAGGGGTTCACACCCATTTCCATTACTTCCATTCC
TCTGTATAAAAAAAAAAAAAAAAAACCGGAGAAAAAACTTTTTCTTTATCATAATTTTGC
ATATATTGAACAATTGCTGTGCGTTTTGATTGTGAATTGTTCTATCTGTGCTGTTTCTAG
GGTTTGTTTTTTGAGTTAATGAATCAAACCGGGTTTTGTAGAAATCTTGTTCACCTTTAG
GGTTTTTTTCTGGGTTGTTGAATTTGTGCTCCAATGGATAAGAAGAAAGTGGCGGTGCCC
CTCGTATGCCACGGGCATTCCCGGCCCGTCGTTGACTTGTTTTACAGTCCTGTCACTCCT
GATGGGTTCTTCCTCATCAGTGCCAGCAAGGATTCTACTCCAATGCTGAGGAATGGGGAG
ACTGGGGATTGGATTGGAACCTTTGAAGGACATAAAGGTGCTGTTTGGAGTTGCAGCCTA
GATACTAATGCTTTACGTGCTGCATCTGGCTCTGCAGATTTTACTGCGAAATTGTGGGAT
GCATTGACTGGGGACGAATTGCACTCTTTTGAACACAAGCACATTGTTCGGGCATGTGCC
TTCTCAGAGGATACACACTTCCTACTCACTGGTGGAGTTGAAAAGGTACTTCGTATATTT
GATCTGAATCGCCCTGATGCACCTCCTAGAGAGGTTGAAAATTCACCTGGTTCAATCAGA
ACAGTTGCCTGGCTTCATAGCGACCAGACAATTTTGAGTTCCTGTACTGATAACGGGGGT
GTGAGGTTATGGGATGTGAGAACTGGCAAAATTGTTCACACACTTGAGACCAAGTCACCT
GTAACCAGCGCTGAAGTGAGTCAGGATGGCCGCTACATAACAACTGCAGATGGGACTACT
GTTAAGTTTTGGGATGCAAATCATTATGGATTAGTGAAAAGCTACAACATGCCCTGCAAC
ATGGAATCGGCTTCATTGGAACCAAAGTTTGGCAATAAGTTCATTGCTGGAGGAGAAGAT
ATGTGGATTCATATGTTTGATTTCAATACCGGGGAAGAGATTGGATGCAACAAGGGTCAC
CATGGCCCTGTACACTGTGTGCGTTTCTCGCCCGGGGGTGAATCTTATGCGTCAGGATCC
GAAGATGGAACCATTAGAATTTGGCAGACAGGCCCTCAGAATCTTGAAGAACCAGACAGC
TTTGTGTCTGGGAAGGTCAAGGTTGTGGTCGATGAGGTTACCCGCAAGGTTGAGGGATTT
CATGTTGGCAAAGACGGGAAAACTGGAAACAAGGAGAAGGCCTTAGATGGCTAACTTGGT
TTGAGACACCATGGAGCATTGAGCTTGCTTACTCTCTCCTTCATTAGCTGGGTTGTAGGC
AGGTTTTATGCGACTTCTGGACATTGTCTTGTGGAAATAAAAGTGAACTGGTTTTTTCCC
TTAGGAGACTTTCTTTATTAGACTGTTTTTTCCTTATACCCCCTTCTTAGGGTAGAAAAG
TGTAGAACTTGAGAGGACAATGTTAATGTGCAGAAGAGTTTGTTTGGCTGGTTGGAAATG
CTGGGTATTATGAATGTTGGATTTTGTTGGTTTTCATTGATTTTGGGCAGCCATCCTTTG
GGATGCCT