Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g05680.t01
CDS Infomation

cds chromosome:12X:9:5435922:5439455:1 gene:VIT_09s0002g05680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCATGGATATTGCATTCTCAGAAGAAGAGGTGGCTATCGACGAGGGCCTTGGGTAC
CCGAAAGCCTACGCGAAGCTCTGTTGGAATCGCGGTCTTGGTCCATACAGCCACGGCCCT
CCTTTCACCTTCACGCCTTATATTCTGCAGCAACATGAGGCTCTGAGAGCAAGGGAATTG
GATCAGATGTTCCCAATTATAGATCCCAAAGCGAAACCAACCACCAAGCCCAAGATTTTT
ATCAGTCTCCTCTGGAAACAACTCAACCACCTAGGGAATGCTGGCTTTGACCCTGCAATA
TTTCGGGTTGATCCTTATGGCAATGTTCTATATTATCATGCTGATTCGGCCTCCCCGCTA
GCCTGGGATATAGATCATTGGTTTCCCTGCTCAAGAGGAGGATTAACTGTCCCCAGCAAT
TTGAGGATATTGCAGTGGCAAGTGTGCAGAAGGAAGCATAACAAGCTGGAATTTCTAGTT
CCATGGTGGGATCTTCAATTAGGCATCTCCATTAACCAGTTCTTATCGATATTTGCTTCT
TCTAACTCGGACTTCAGGCACAGGGCATTTTCATTGCTGTTCTTTGAAGGGGAAAATGAA
GAATTAAATGATTCACATACAGTAGAATCGCATACTTTTCCACACCATTTCATTGAATCC
AAAGAGCAAGTAGGCCTTGCTCCTGCTGCTGTTGTTTTATCTCGAAGAGAATCCCGGGAT
CCTTCACCAGCCCTGAAATCCCTGGATTTCAATAGGCAGCCAAGGCCAAACTCCCCTATA
GTTGCTGCCAGGAAAATGAAACATAGTGTCTCCAAAGAAAATGAAAACCCAGACATGGTT
ACCAACCCCTATCAAGCCATTGTCATGGCCAGAGATTCCCTGAAACAAAGAGAAGAAGCA
GCAAAAATGCAAGGAGAAATACAGAAATTGGATGATGAAGTGAACGACTTGAAGCAAAAG
AATGAAGAGGAAAAGGTCTTGATTCAAGACTTGGAATACCAGCTCATAAAGCGTAGGAGA
CGGGCCGAAAAGTGTAGGCGCCTAGCAGAGGCACAATCTTCATATAGGATCATGTTAGAG
AAGATGATTCGAGATGCCATGCACCAGAGTGTCATCTACAAGGAACAAGTGAGACTGAAC
CAGGCAGCAACAAATGCTCTCATGGCAAGGCTTGAAGCACAGAAGGCTATTTGTGATGCC
TCGGAGAAGGAACTCCACAAAAAATTCAAACAAAGGGATGAGATTGAGTACCAGATAAGA
CCCGAGTGGGAGCAAGGAAGGAAGAGGTCGAGAATGGATGACAACTTACATGAAGACGGA
GACAACAAAACTGTTTTGTGTTTACCAGGAATCAAGCCAAGTAGTGCACTTTCACACAAG
GAACTGAGGGTGTTTCTAGAGGAGGAGCAGAAAGCATCTGAGGCTGCCTTGTCTCTGATT
GAGGAAAGAAAGCAAGAAGAAATAGAAGAGGAACCTGCAGAAAATGTGAATAGTAGGGAG
AAGCCTGAGGAGACACGTCTCTCCATTGTTGCAGTGGAGGATGAAAACACAATTGAGGAG
AGGCTTCAGGCATTAGAAATTGGAGAAGGGAAGAACTATAACACCCAATTCCCGGTTCTT
CGAGAACCGGAAATAGAGGAGGACGAAGAGTGCAGGAAGCAGCGTGGGAAAGGAAATGTA
GAGAAGTGGCTCCAGATGCTGTTAGAGAACACTCAAGAAGAAGGGTTTGGCTCTAACAAT
GCCCAGGAACATGAAACAAGCAGGACTGATGAAGTAATCAGACAACTAAATCTCAAGTAT
CCCTACAACCAGACAAAGTTCCCAGAATCAGAGAACAAGCAGCAAAAAATCCGGGGGAGG
AAAGATCAATGGAAGGGGAAGGAACCGATTGTTGAGAAGGATGGTAATAGTAATACAGTG
TCTGAGAACCTTCCCAACCTACTTCCTTCAGATAAAAGCTACGCAGATGGGGTGGTGGGT
AGTATTGGTAAAGGAGTTGGGAGTAGTATGAGCTTTGAAGGGAAGGAAAGAAAGGGGGAG
AGAAGCCGAAAGGACAGGGGGCTTGTGAGAAGCGAGAGTGCCAGGACCTTTCGACCAACC
CCATCATCTCCATCTGTGATCTTGACCATGAAAAAGGGAGTGGATTGCATAGGGAAGAAG
CCCATGGTAACCGGTGATGATGAGGATGAGGAGGATGGAGTCGTTCATAAAAACTTCCTG
AAGTCATCCATCAAAACCATCAAGAAGGTGGTGAAGATGTAA

Peptide Sequence

PEP ID

VIT_09s0002g05680.t01
PEP Infomation

pep chromosome:12X:9:5435922:5439455:1 gene:VIT_09s0002g05680 transcript:VIT_09s0002g05680.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAMDIAFSEEEVAIDEGLGYPKAYAKLCWNRGLGPYSHGPPFTFTPYILQQHEALRAREL
DQMFPIIDPKAKPTTKPKIFISLLWKQLNHLGNAGFDPAIFRVDPYGNVLYYHADSASPL
AWDIDHWFPCSRGGLTVPSNLRILQWQVCRRKHNKLEFLVPWWDLQLGISINQFLSIFAS
SNSDFRHRAFSLLFFEGENEELNDSHTVESHTFPHHFIESKEQVGLAPAAVVLSRRESRD
PSPALKSLDFNRQPRPNSPIVAARKMKHSVSKENENPDMVTNPYQAIVMARDSLKQREEA
AKMQGEIQKLDDEVNDLKQKNEEEKVLIQDLEYQLIKRRRRAEKCRRLAEAQSSYRIMLE
KMIRDAMHQSVIYKEQVRLNQAATNALMARLEAQKAICDASEKELHKKFKQRDEIEYQIR
PEWEQGRKRSRMDDNLHEDGDNKTVLCLPGIKPSSALSHKELRVFLEEEQKASEAALSLI
EERKQEEIEEEPAENVNSREKPEETRLSIVAVEDENTIEERLQALEIGEGKNYNTQFPVL
REPEIEEDEECRKQRGKGNVEKWLQMLLENTQEEGFGSNNAQEHETSRTDEVIRQLNLKY
PYNQTKFPESENKQQKIRGRKDQWKGKEPIVEKDGNSNTVSENLPNLLPSDKSYADGVVG
SIGKGVGSSMSFEGKERKGERSRKDRGLVRSESARTFRPTPSSPSVILTMKKGVDCIGKK
PMVTGDDEDEEDGVVHKNFLKSSIKTIKKVVKM

Transcript Sequence

Transcript ID

VIT_09s0002g05680.t01
Transcript Infomation

cdna chromosome:12X:9:5435922:5439455:1 gene:VIT_09s0002g05680 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAACAACAATGGCCATGGATATTGCATTCTCAGAAGAAGAGGTGGCTATCGACGAGGGCC
TTGGGTACCCGAAAGCCTACGCGAAGCTCTGTTGGAATCGCGGTCTTGGTCCATACAGCC
ACGGCCCTCCTTTCACCTTCACGCCTTATATTCTGCAGCAACATGAGGCTCTGAGAGCAA
GGGAATTGGATCAGATGTTCCCAATTATAGATCCCAAAGCGAAACCAACCACCAAGCCCA
AGATTTTTATCAGTCTCCTCTGGAAACAACTCAACCACCTAGGGAATGCTGGCTTTGACC
CTGCAATATTTCGGGTTGATCCTTATGGCAATGTTCTATATTATCATGCTGATTCGGCCT
CCCCGCTAGCCTGGGATATAGATCATTGGTTTCCCTGCTCAAGAGGAGGATTAACTGTCC
CCAGCAATTTGAGGATATTGCAGTGGCAAGTGTGCAGAAGGAAGCATAACAAGCTGGAAT
TTCTAGTTCCATGGTGGGATCTTCAATTAGGCATCTCCATTAACCAGTTCTTATCGATAT
TTGCTTCTTCTAACTCGGACTTCAGGCACAGGGCATTTTCATTGCTGTTCTTTGAAGGGG
AAAATGAAGAATTAAATGATTCACATACAGTAGAATCGCATACTTTTCCACACCATTTCA
TTGAATCCAAAGAGCAAGTAGGCCTTGCTCCTGCTGCTGTTGTTTTATCTCGAAGAGAAT
CCCGGGATCCTTCACCAGCCCTGAAATCCCTGGATTTCAATAGGCAGCCAAGGCCAAACT
CCCCTATAGTTGCTGCCAGGAAAATGAAACATAGTGTCTCCAAAGAAAATGAAAACCCAG
ACATGGTTACCAACCCCTATCAAGCCATTGTCATGGCCAGAGATTCCCTGAAACAAAGAG
AAGAAGCAGCAAAAATGCAAGGAGAAATACAGAAATTGGATGATGAAGTGAACGACTTGA
AGCAAAAGAATGAAGAGGAAAAGGTCTTGATTCAAGACTTGGAATACCAGCTCATAAAGC
GTAGGAGACGGGCCGAAAAGTGTAGGCGCCTAGCAGAGGCACAATCTTCATATAGGATCA
TGTTAGAGAAGATGATTCGAGATGCCATGCACCAGAGTGTCATCTACAAGGAACAAGTGA
GACTGAACCAGGCAGCAACAAATGCTCTCATGGCAAGGCTTGAAGCACAGAAGGCTATTT
GTGATGCCTCGGAGAAGGAACTCCACAAAAAATTCAAACAAAGGGATGAGATTGAGTACC
AGATAAGACCCGAGTGGGAGCAAGGAAGGAAGAGGTCGAGAATGGATGACAACTTACATG
AAGACGGAGACAACAAAACTGTTTTGTGTTTACCAGGAATCAAGCCAAGTAGTGCACTTT
CACACAAGGAACTGAGGGTGTTTCTAGAGGAGGAGCAGAAAGCATCTGAGGCTGCCTTGT
CTCTGATTGAGGAAAGAAAGCAAGAAGAAATAGAAGAGGAACCTGCAGAAAATGTGAATA
GTAGGGAGAAGCCTGAGGAGACACGTCTCTCCATTGTTGCAGTGGAGGATGAAAACACAA
TTGAGGAGAGGCTTCAGGCATTAGAAATTGGAGAAGGGAAGAACTATAACACCCAATTCC
CGGTTCTTCGAGAACCGGAAATAGAGGAGGACGAAGAGTGCAGGAAGCAGCGTGGGAAAG
GAAATGTAGAGAAGTGGCTCCAGATGCTGTTAGAGAACACTCAAGAAGAAGGGTTTGGCT
CTAACAATGCCCAGGAACATGAAACAAGCAGGACTGATGAAGTAATCAGACAACTAAATC
TCAAGTATCCCTACAACCAGACAAAGTTCCCAGAATCAGAGAACAAGCAGCAAAAAATCC
GGGGGAGGAAAGATCAATGGAAGGGGAAGGAACCGATTGTTGAGAAGGATGGTAATAGTA
ATACAGTGTCTGAGAACCTTCCCAACCTACTTCCTTCAGATAAAAGCTACGCAGATGGGG
TGGTGGGTAGTATTGGTAAAGGAGTTGGGAGTAGTATGAGCTTTGAAGGGAAGGAAAGAA
AGGGGGAGAGAAGCCGAAAGGACAGGGGGCTTGTGAGAAGCGAGAGTGCCAGGACCTTTC
GACCAACCCCATCATCTCCATCTGTGATCTTGACCATGAAAAAGGGAGTGGATTGCATAG
GGAAGAAGCCCATGGTAACCGGTGATGATGAGGATGAGGAGGATGGAGTCGTTCATAAAA
ACTTCCTGAAGTCATCCATCAAAACCATCAAGAAGGTGGTGAAGATGTAAAGCAGGAAGA
TCACAGCTTAGTGTCACACTGTGTGGTTACGAAACATCTAAGTCTGTGACATTAGTCTCT
GTTTCCATTGAATCTTCATTTTTTAGTAAGGATGCTGGCAAGTAGCTCCTTCAAGCTTAA
TAATGGTGTGAAATTTAGGCGTTTATTGTGTTTGACTTTGTGTATAAGACTGATTGTTCT
ATATATATAATAACAGCTTGTTGTTTGATCAGCTAAA