Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g04450.t01
CDS Infomation

cds chromosome:12X:9:4053840:4058759:1 gene:VIT_09s0002g04450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGAAAGTGAACCCCCCAAATTTCCGGCGTTTCCATATGAGCCCTATTCGATTCAG
ATTGATTTCATGAAAGCCCTTTATCGCTCTCTCAATAAGGGTGGTGTTTCTATGCTCGAA
AGCCCCACTGGGACTGGCAAAACTCTGAGTATAATTTGCAGTGCTCTGCAATGGCTTGTT
GACAGGAAGCAACAACTCAAATCTGAAGCCAATCAGACTCAAACACCTGGAGGTGGAACT
GGTTCAGACGATGAACCCGACTGGATGAAAAACTTTGTCGCAAACAAAGATCCTGCAGTG
GAGGACAAGATGAAGAAGAAGCTAAGGTTTGGAAAGGAGAAACCAGATAAGGGAAGGAAT
CAAGGAAGTTGCAGAAACCTGTTATCACCTAATCTTGTAGAGGAAGGTATTCATGAGAAG
AAAGATAGTGAGAATCTGGGGGAAATTAATGGGGTGGAATTGAATGATGAAGAGTTCTTG
GTGGAAGAATATGAAAGCGAAGAGGAAGAGGGTGTTGGTGTAGGGAAATCAAAGAGGAAG
GCTGGTGGGGTTTCTATAAATTCATCAAGTGATGAGGAAGAGGAAGATGACAACGAGGAG
GATGGAGAGGGATTAAAGATTTATTTCTGTAGTCGGACCCACTCACAACTGTCGCAGTTT
GTGAAGGAGTTAAGAAAGACTATTTTTGGTAATGAGATGAAGGTTGTATGTTTGGGCTCA
AGGAAAATTTCCTGCATCAATGAAGAGGTTTTGAAGCTGGGAAACTCTACTCGTATCAAC
GAACGGTGTTTGGAGCTTCAACAGAACAAGAAAAAAGAAGTTTCCAAACTTAAGAACTTG
GGTTCAGAAGGAAGAATACGTAGGACCAAGGCTTCTTCTGGATGCCCAATGCTTAGAAAT
CATAAATTACAAAAGCAATTTAGGAGTGAGATTTCACAAGAAGGAGCTTTGGATATTGAA
GACCTTGTGCACCTTGGAAGAAGGATGGGAACTTGTCCATATTATGGCTCCCGAAGCATC
ATCCCAGCAGCTGATCTTGTGGTTCTTCCATATCAGTCTCTTCTATCAAAATCATCCCGC
GAATCACTTGGTCTGAATTTGAAGAATAACATTGTTATAATAGACGAAGCTCACAATCTA
GCCGATTCTCTCATTAGCATGTATGATGCAAAAATCACTTCCTCACAGTTGGAGCATGTG
CATTCTCATATAAAGCAGTATCTGCAAAGATTTCGCAATTTTTTAGGACCTGGCAATCGA
AGATATATCCAAACATTATTAGTCGTCACCAGGGCTTTTCTTCAAATTCTTCTTAATGGT
AAGGATACAAGTTTGGTTGATCCTGGCCATGATGCTGAAAAAGCTTTTGGAGCGAAAAGT
GCCTCTGATTCTTCTATGGCCATTAATGATTTTTTGTTCTCTCTCAATATTGACAACATC
AACTTGGTCAAATTGCTACATTATATAAAGGAAAGCAATATCATCCACAAGGTAAGTGGT
TATGGAGATAAAGTGGCCTACTTGCGAAAAGGTTCAGCCCTTAATGATGGTGGAGAAAGT
AATGAGGAGGGAAGTACTTTGTCTGGATTTCGGGCATTTGTTGATATGTTGCAGTCACTA
ACAAATAATGATGGTGACGGAAAGATAATAATCTCAAGGGCAAAACAAGCATGTTCTGGA
CAACAAGGAGGATATCTAAAATATGTTATGCTCACAGGGGAGAAGATTTTTTCTGAGATT
GTGGATCAAGCACATGCTGTCATACTGGCAGGAGGAACCCTGCAACCAATTGAGGAGACA
AGGGAGCGACTATTCCCATGGTTAACATCTGATCAGTTCCATTTCTTTTCATGCAGTCAC
ATTATCCCTCCTGAGAGTATTTTGCCTGTTGCTCTTTCTCATGGCCCCTCTGGCCAGTCA
TTTGATTTTAGTTACAGCTCCAGAAGCTCATCAATCATGATAGAGGAGCTAGGACTCTTG
CTTTGCAATTTGGTGACAGTGGTTCCTGAAGGAATTGTTGTGTTCTTCTCTTCATTTGAT
TATGAAGGACAGGTCCATGATGCATGGAAGGCTTCAGGCATTCTTGAGAGGATTATGAAG
AAGAAGTGTGTATTTAGAGAGCCTAGAAAAAACACAGATGTGGAATTTGTTCTTAAGGAA
TACAAGGAAGCAATTGATAAATCATCTGACAGGAATCAGAAAGAAGATCCAGTGCCTCAG
AATGGTGCTATACTCCTAGCTGTAGTCGGTGGGAAGATATCAGAAGGTATCAACTTCAGC
GATGGGATGGGTCGATGCATTGTCATGGTTGGACTGCCCTACCCTAGTCCATCTGACATT
GAGTTGTTGGAGAGGGTGAAGTATATTGAAGGCCTGGGAGTCTCAATCTCCAGCCGATCA
ACAAAGTTTTCAGTTGGTAATGAATATTTCAGTGGAGATGTCCAAGTTGGGTTCGACATC
CTACGAAGTTGCAAGCATAGAGGAAAAGAATATTATGAAAATCTTTGCATGAAAGCTGTA
AATCAATCAATTGGTAGAGCAATTCGGCACATCAATGACTACGCTGCAATTTTGTTGGTT
GACGCACGATATGCATCCGATCCTTTAAAAAGAAGCTTCTCTCACCCAACTAACAAGCTC
CCACAGTGGATAAAAGATTGTCTTGTACCTGTAACTGGCAAATATGGAGAAGCACACAGG
CTGCTGCACCAGTTCTTCAAATTCAACAAGAAGAGAGGCTGTCAGTAA

Peptide Sequence

PEP ID

VIT_09s0002g04450.t01
PEP Infomation

pep chromosome:12X:9:4053840:4058759:1 gene:VIT_09s0002g04450 transcript:VIT_09s0002g04450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEESEPPKFPAFPYEPYSIQIDFMKALYRSLNKGGVSMLESPTGTGKTLSIICSALQWLV
DRKQQLKSEANQTQTPGGGTGSDDEPDWMKNFVANKDPAVEDKMKKKLRFGKEKPDKGRN
QGSCRNLLSPNLVEEGIHEKKDSENLGEINGVELNDEEFLVEEYESEEEEGVGVGKSKRK
AGGVSINSSSDEEEEDDNEEDGEGLKIYFCSRTHSQLSQFVKELRKTIFGNEMKVVCLGS
RKISCINEEVLKLGNSTRINERCLELQQNKKKEVSKLKNLGSEGRIRRTKASSGCPMLRN
HKLQKQFRSEISQEGALDIEDLVHLGRRMGTCPYYGSRSIIPAADLVVLPYQSLLSKSSR
ESLGLNLKNNIVIIDEAHNLADSLISMYDAKITSSQLEHVHSHIKQYLQRFRNFLGPGNR
RYIQTLLVVTRAFLQILLNGKDTSLVDPGHDAEKAFGAKSASDSSMAINDFLFSLNIDNI
NLVKLLHYIKESNIIHKVSGYGDKVAYLRKGSALNDGGESNEEGSTLSGFRAFVDMLQSL
TNNDGDGKIIISRAKQACSGQQGGYLKYVMLTGEKIFSEIVDQAHAVILAGGTLQPIEET
RERLFPWLTSDQFHFFSCSHIIPPESILPVALSHGPSGQSFDFSYSSRSSSIMIEELGLL
LCNLVTVVPEGIVVFFSSFDYEGQVHDAWKASGILERIMKKKCVFREPRKNTDVEFVLKE
YKEAIDKSSDRNQKEDPVPQNGAILLAVVGGKISEGINFSDGMGRCIVMVGLPYPSPSDI
ELLERVKYIEGLGVSISSRSTKFSVGNEYFSGDVQVGFDILRSCKHRGKEYYENLCMKAV
NQSIGRAIRHINDYAAILLVDARYASDPLKRSFSHPTNKLPQWIKDCLVPVTGKYGEAHR
LLHQFFKFNKKRGCQ

Transcript Sequence

Transcript ID

VIT_09s0002g04450.t01
Transcript Infomation

cdna chromosome:12X:9:4053840:4058759:1 gene:VIT_09s0002g04450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGAAAGTGAACCCCCCAAATTTCCGGCGTTTCCATATGAGCCCTATTCGATTCAG
ATTGATTTCATGAAAGCCCTTTATCGCTCTCTCAATAAGGGTGGTGTTTCTATGCTCGAA
AGCCCCACTGGGACTGGCAAAACTCTGAGTATAATTTGCAGTGCTCTGCAATGGCTTGTT
GACAGGAAGCAACAACTCAAATCTGAAGCCAATCAGACTCAAACACCTGGAGGTGGAACT
GGTTCAGACGATGAACCCGACTGGATGAAAAACTTTGTCGCAAACAAAGATCCTGCAGTG
GAGGACAAGATGAAGAAGAAGCTAAGGTTTGGAAAGGAGAAACCAGATAAGGGAAGGAAT
CAAGGAAGTTGCAGAAACCTGTTATCACCTAATCTTGTAGAGGAAGGTATTCATGAGAAG
AAAGATAGTGAGAATCTGGGGGAAATTAATGGGGTGGAATTGAATGATGAAGAGTTCTTG
GTGGAAGAATATGAAAGCGAAGAGGAAGAGGGTGTTGGTGTAGGGAAATCAAAGAGGAAG
GCTGGTGGGGTTTCTATAAATTCATCAAGTGATGAGGAAGAGGAAGATGACAACGAGGAG
GATGGAGAGGGATTAAAGATTTATTTCTGTAGTCGGACCCACTCACAACTGTCGCAGTTT
GTGAAGGAGTTAAGAAAGACTATTTTTGGTAATGAGATGAAGGTTGTATGTTTGGGCTCA
AGGAAAATTTCCTGCATCAATGAAGAGGTTTTGAAGCTGGGAAACTCTACTCGTATCAAC
GAACGGTGTTTGGAGCTTCAACAGAACAAGAAAAAAGAAGTTTCCAAACTTAAGAACTTG
GGTTCAGAAGGAAGAATACGTAGGACCAAGGCTTCTTCTGGATGCCCAATGCTTAGAAAT
CATAAATTACAAAAGCAATTTAGGAGTGAGATTTCACAAGAAGGAGCTTTGGATATTGAA
GACCTTGTGCACCTTGGAAGAAGGATGGGAACTTGTCCATATTATGGCTCCCGAAGCATC
ATCCCAGCAGCTGATCTTGTGGTTCTTCCATATCAGTCTCTTCTATCAAAATCATCCCGC
GAATCACTTGGTCTGAATTTGAAGAATAACATTGTTATAATAGACGAAGCTCACAATCTA
GCCGATTCTCTCATTAGCATGTATGATGCAAAAATCACTTCCTCACAGTTGGAGCATGTG
CATTCTCATATAAAGCAGTATCTGCAAAGATTTCGCAATTTTTTAGGACCTGGCAATCGA
AGATATATCCAAACATTATTAGTCGTCACCAGGGCTTTTCTTCAAATTCTTCTTAATGGT
AAGGATACAAGTTTGGTTGATCCTGGCCATGATGCTGAAAAAGCTTTTGGAGCGAAAAGT
GCCTCTGATTCTTCTATGGCCATTAATGATTTTTTGTTCTCTCTCAATATTGACAACATC
AACTTGGTCAAATTGCTACATTATATAAAGGAAAGCAATATCATCCACAAGGTAAGTGGT
TATGGAGATAAAGTGGCCTACTTGCGAAAAGGTTCAGCCCTTAATGATGGTGGAGAAAGT
AATGAGGAGGGAAGTACTTTGTCTGGATTTCGGGCATTTGTTGATATGTTGCAGTCACTA
ACAAATAATGATGGTGACGGAAAGATAATAATCTCAAGGGCAAAACAAGCATGTTCTGGA
CAACAAGGAGGATATCTAAAATATGTTATGCTCACAGGGGAGAAGATTTTTTCTGAGATT
GTGGATCAAGCACATGCTGTCATACTGGCAGGAGGAACCCTGCAACCAATTGAGGAGACA
AGGGAGCGACTATTCCCATGGTTAACATCTGATCAGTTCCATTTCTTTTCATGCAGTCAC
ATTATCCCTCCTGAGAGTATTTTGCCTGTTGCTCTTTCTCATGGCCCCTCTGGCCAGTCA
TTTGATTTTAGTTACAGCTCCAGAAGCTCATCAATCATGATAGAGGAGCTAGGACTCTTG
CTTTGCAATTTGGTGACAGTGGTTCCTGAAGGAATTGTTGTGTTCTTCTCTTCATTTGAT
TATGAAGGACAGGTCCATGATGCATGGAAGGCTTCAGGCATTCTTGAGAGGATTATGAAG
AAGAAGTGTGTATTTAGAGAGCCTAGAAAAAACACAGATGTGGAATTTGTTCTTAAGGAA
TACAAGGAAGCAATTGATAAATCATCTGACAGGAATCAGAAAGAAGATCCAGTGCCTCAG
AATGGTGCTATACTCCTAGCTGTAGTCGGTGGGAAGATATCAGAAGGTATCAACTTCAGC
GATGGGATGGGTCGATGCATTGTCATGGTTGGACTGCCCTACCCTAGTCCATCTGACATT
GAGTTGTTGGAGAGGGTGAAGTATATTGAAGGCCTGGGAGTCTCAATCTCCAGCCGATCA
ACAAAGTTTTCAGTTGGTAATGAATATTTCAGTGGAGATGTCCAAGTTGGGTTCGACATC
CTACGAAGTTGCAAGCATAGAGGAAAAGAATATTATGAAAATCTTTGCATGAAAGCTGTA
AATCAATCAATTGGTAGAGCAATTCGGCACATCAATGACTACGCTGCAATTTTGTTGGTT
GACGCACGATATGCATCCGATCCTTTAAAAAGAAGCTTCTCTCACCCAACTAACAAGCTC
CCACAGTGGATAAAAGATTGTCTTGTACCTGTAACTGGCAAATATGGAGAAGCACACAGG
CTGCTGCACCAGTTCTTCAAATTCAACAAGAAGAGAGGCTGTCAGTAA