Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g04020.t01
CDS Infomation

cds chromosome:12X:9:3712870:3714177:-1 gene:VIT_09s0002g04020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aquaporin TIP2;1 [Source:UniProtKB/TrEMBL;Acc:Q0MX09]
Sequence

ATGCCTAAAATAGCCTTCGGCCGCTTCGATGATTCCTTCAGTTTGGCCTCCTTCAAGGCC
TACCTTGCTGAGTTCCACTCCACCATACTCTTCGTCTTTGCTGGAGTCGGTTCAGTCATG
GCTTACAACAAGTTGACATCAGACGCTGCTCTTGACCCGGCGGGGCTGGTGGCGGTTGCT
GTTGCCCATGGTTTCGCTCTCTTTGTTGCAGTCGCTATTAGCGCCAACATCTCCGGTGGC
CATGTTAACCCTGCGGTGACCTTCGGGCTGGTTGTTGGTGGTCAGATCACCATTCTCACT
GGCATCTTGTACTGGATTGCCCAGCTTGTTGGCTCCATTCTTGCATGTTTCCTACTCAAA
CTTGTCACAGGAGGCTTGACGACTCCCGTCCATAGTCTTGGAGCTGGGGTTGGAGTCATT
GATGCTATTGTCTTCGAGATCGTGATCACTTTCGCTCTGGTCTACACCGTCTATGCAACG
GCGGTTGACCCGAAGAAGGGCTCACTGGGCATCATTGCACCCATTGCCATAGGTCTTGTT
GTAGGTGCAAACATCCTGGCTGCAGGCCCATTCTCCGGTGGATCAATGAACCCCGCCCGC
TCCTTCGGCCCCGCCGTCGTCAGCGGCGACTTCAAGGACAACTGGATCTACTGGGTGGGA
CCCCTAATTGGAGGTGGCATGGGAGGATCTGTCTATGCAATTATGTACATGGGCTCTGAT
CATCAACCACTAGCGTCCAGCGAATTCTAA

Peptide Sequence

PEP ID

VIT_09s0002g04020.t01
PEP Infomation

pep chromosome:12X:9:3712870:3714177:-1 gene:VIT_09s0002g04020 transcript:VIT_09s0002g04020.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aquaporin TIP2;1 [Source:UniProtKB/TrEMBL;Acc:Q0MX09]
Sequence

MPKIAFGRFDDSFSLASFKAYLAEFHSTILFVFAGVGSVMAYNKLTSDAALDPAGLVAVA
VAHGFALFVAVAISANISGGHVNPAVTFGLVVGGQITILTGILYWIAQLVGSILACFLLK
LVTGGLTTPVHSLGAGVGVIDAIVFEIVITFALVYTVYATAVDPKKGSLGIIAPIAIGLV
VGANILAAGPFSGGSMNPARSFGPAVVSGDFKDNWIYWVGPLIGGGMGGSVYAIMYMGSD
HQPLASSEF

Transcript Sequence

Transcript ID

VIT_09s0002g04020.t01
Transcript Infomation

cdna chromosome:12X:9:3712870:3714177:-1 gene:VIT_09s0002g04020 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aquaporin TIP2;1 [Source:UniProtKB/TrEMBL;Acc:Q0MX09]
Sequence

ATCTCAGCCTTCTCCTATCCTCATCTCTTCATTCATCTTCAATAGTTGCTTCCAAAAAAT
GCCTAAAATAGCCTTCGGCCGCTTCGATGATTCCTTCAGTTTGGCCTCCTTCAAGGCCTA
CCTTGCTGAGTTCCACTCCACCATACTCTTCGTCTTTGCTGGAGTCGGTTCAGTCATGGC
TTACAACAAGTTGACATCAGACGCTGCTCTTGACCCGGCGGGGCTGGTGGCGGTTGCTGT
TGCCCATGGTTTCGCTCTCTTTGTTGCAGTCGCTATTAGCGCCAACATCTCCGGTGGCCA
TGTTAACCCTGCGGTGACCTTCGGGCTGGTTGTTGGTGGTCAGATCACCATTCTCACTGG
CATCTTGTACTGGATTGCCCAGCTTGTTGGCTCCATTCTTGCATGTTTCCTACTCAAACT
TGTCACAGGAGGCTTGACGACTCCCGTCCATAGTCTTGGAGCTGGGGTTGGAGTCATTGA
TGCTATTGTCTTCGAGATCGTGATCACTTTCGCTCTGGTCTACACCGTCTATGCAACGGC
GGTTGACCCGAAGAAGGGCTCACTGGGCATCATTGCACCCATTGCCATAGGTCTTGTTGT
AGGTGCAAACATCCTGGCTGCAGGCCCATTCTCCGGTGGATCAATGAACCCCGCCCGCTC
CTTCGGCCCCGCCGTCGTCAGCGGCGACTTCAAGGACAACTGGATCTACTGGGTGGGACC
CCTAATTGGAGGTGGCATGGGAGGATCTGTCTATGCAATTATGTACATGGGCTCTGATCA
TCAACCACTAGCGTCCAGCGAATTCTAAGCTGAGTTTTTTTCAGGAACTCAATTGTTTGT
TGTTGTCTCAACCCATTTCCCTTTGAAATAAAAAGGAGGAAGAGCAAGTTGTGCTACTTC
TTTCTTTTTGTACTTGTATTTTGTTCTTTGATCTTCTTCGATTCTCTCCCTTTTGGATTT
GTAAAGCCCTTGCTTTGGTTCAAGCTGTGTAAAAGATGCAATTATGCATATGAATGAGGT
TGGTGATGTGCAGCCACTTTGCTTTCTA