Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g03990.t01
CDS Infomation

cds chromosome:12X:9:3694325:3699552:-1 gene:VIT_09s0002g03990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTCGAGCAGGAGAGCTGTGGAATCGTACTGGAGATCGCGAATGATTGATGGAGCA
ACGTCTGACGAAGACAAGGTCACGCCTGTTTACAAATTAGAAGAGATTTGCGAGCTCCTT
CGGTCTTCGCATGTTAGTATTGTGAAGGAAGTCTCTGAGTTTATTTTGAAACGGCTCGAT
CATAAGAGCCCAGTTGTTAGACAGAAGGCTCTAAGGCTGATTAAATATGCGGTGGGAAAG
TCAGGTGTGGAGTTTAGAAGGGAAATGCAAAGACACTCAGTGGCTGTGCGACAGTTACTC
CATTACAAGGGCCAGTTAGATGCTTTGAAGGGGGATGCCCTTAATAAGGCTGTTCGAGAC
ACGGCTCAAGAAACTATCTCTGCTATCTTTGCTGCAGAGGAAAATAAGCCAGCACCTTCA
GAAGATCTTAATAGACGAATTCAAGGTTTTGGGAATACAAACTATGAGATGCCATCAGAA
GATAAGAAATCATTTCTCAGTGAGGTAGTTGGTCTTGGAAGTACATCTATCAAACAGGGA
ATTAGTAGTATCACACAAGGTCATTCGCTAAGGAAGAATGATAATGGAAGCTACAAGAGT
CCAAATCTTCGAAGGTCATTGACTACAGAAATTGAGTACCAAGATAGATATGAAGGAGTT
GAACATCAAAATGAAACCCAAAGTAGTTTTGGCAGCTCAAAGAATGTTTCTGGTGGGCCT
TGGAACCAGGATGTACGAATAACCAAGTCAGAAACTACCAACGGAGACTCCAGTTCAAGC
TTTGCTGAGAGTAAGACCCGTGAGGAGAGATTATTGGAAACAATAGTGACATCAGGAGGT
GTACGTCTGCAGCCCACTCGAGATGCTATTCAGATTTTCCTCATAGAAGCTGCAAAGTTG
GATGCTTTGGCGTTAAGTCATGCCCTTGAATCAAAGCTCCATTCTCCTCTGTGGCAGGTG
CGGATGAAAGCTGTTTGTGTGCTTGACTCAATTTTGAGGAAAAAGGATGAAGAACAGTTT
TCAACTGTAGCATCTTATTTTTGTGAAAACAAAGATGTTGTGTTGAAATGTTGCGAGTCT
CCCCAAGCTTCACTGAGGGAAAAGGCAAACAAGGTGTTAAGCCTTTTGGGTGGAGAGCAA
ACAGGCAGCACAATGAGCCCTCCTGAAAAGCCACTGAAGACTGAGACAGTGCCTGCAGTT
CAGATGCCTGACTTAATAGACACTGGTGGTCCAGATGATTACTATGGGGCAGAAGATTCT
ATAAAAACCCAAAGTGATCAAAGTGTACCAAATTTGACAACATCAACCAGCCCTCTAATT
GATGATTTATTTGGAGATGGTCTTGGTGTTAGTGAGAACACTGGTGAACAAAAAAATGAT
GACGATCCCTTTGCAGATGTCTCATTTCTCAGTGGCGAGGCTAGAGAACAGGTAGATGAC
CTCTTTTCAGGAATGACTGTTGATGATAAAGTGGGTGCTAATGAGATTCCTAAGGCAGCA
ACTAGTAATGAACCTGAACTATTTGATATTTTTGGGTCAAATGCTGAACTTCCTCAGGAG
CAAGAAAATCATAAAAAGGATGTTAATGATTTAATGGCTGGTTTATCCATTAATGGAAAT
GTCTCAAATACGACACAGAAAGGAATGCTTCCTGGGGCACTCTCTGAGACTGTGTTCTCA
GATTCAAATAGTTACTCCCCCAAGCAAGTCTCCAATGATGCTTTGAATGGTTTTGGTTCT
GAAACGGCTGGCATGAATGCAAATGCCATGTTTCCTTTGGGTTCAATGCCCTATAATATC
CCTCCAGGCATTATGTTCAATCCAGCTTTTCCTTCTCAACCAATGAATTATGGTGCCATG
GGGAATTTCTTTGCCCAGCAGCAGTTCCTAGCAGCAATGTCCAACTTTCAGCAGCTGGGG
AACCTGACTTCTCAAAGTGCTGGCATGGGTCATGCTGGTGGAACAATGGAAGGAGGATAT
TCTTCACCCCTCCCTGACATTTTTCATCCACATATTCCTACTCAAAGTCCCACTGCAGTA
ATGACCAGTTCAAAGAAAGAGGAGACAAAAGCATTTGATTTTATCTCTGATCATCTGGCT
GCTGCTCGAGATCCAAAGAGGGTGATTTGA

Peptide Sequence

PEP ID

VIT_09s0002g03990.t01
PEP Infomation

pep chromosome:12X:9:3694325:3699552:-1 gene:VIT_09s0002g03990 transcript:VIT_09s0002g03990.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDSSRRAVESYWRSRMIDGATSDEDKVTPVYKLEEICELLRSSHVSIVKEVSEFILKRLD
HKSPVVRQKALRLIKYAVGKSGVEFRREMQRHSVAVRQLLHYKGQLDALKGDALNKAVRD
TAQETISAIFAAEENKPAPSEDLNRRIQGFGNTNYEMPSEDKKSFLSEVVGLGSTSIKQG
ISSITQGHSLRKNDNGSYKSPNLRRSLTTEIEYQDRYEGVEHQNETQSSFGSSKNVSGGP
WNQDVRITKSETTNGDSSSSFAESKTREERLLETIVTSGGVRLQPTRDAIQIFLIEAAKL
DALALSHALESKLHSPLWQVRMKAVCVLDSILRKKDEEQFSTVASYFCENKDVVLKCCES
PQASLREKANKVLSLLGGEQTGSTMSPPEKPLKTETVPAVQMPDLIDTGGPDDYYGAEDS
IKTQSDQSVPNLTTSTSPLIDDLFGDGLGVSENTGEQKNDDDPFADVSFLSGEAREQVDD
LFSGMTVDDKVGANEIPKAATSNEPELFDIFGSNAELPQEQENHKKDVNDLMAGLSINGN
VSNTTQKGMLPGALSETVFSDSNSYSPKQVSNDALNGFGSETAGMNANAMFPLGSMPYNI
PPGIMFNPAFPSQPMNYGAMGNFFAQQQFLAAMSNFQQLGNLTSQSAGMGHAGGTMEGGY
SSPLPDIFHPHIPTQSPTAVMTSSKKEETKAFDFISDHLAAARDPKRVI

Transcript Sequence

Transcript ID

VIT_09s0002g03990.t01
Transcript Infomation

cdna chromosome:12X:9:3694325:3699552:-1 gene:VIT_09s0002g03990 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGGGGTTTGAGGGATGGATTCGAGCAGGAGAGCTGTGGAATCGTACTGGAGATCGCGAAT
GATTGATGGAGCAACGTCTGACGAAGACAAGGTCACGCCTGTTTACAAATTAGAAGAGAT
TTGCGAGCTCCTTCGGTCTTCGCATGTTAGTATTGTGAAGGAAGTCTCTGAGTTTATTTT
GAAACGGCTCGATCATAAGAGCCCAGTTGTTAGACAGAAGGCTCTAAGGCTGATTAAATA
TGCGGTGGGAAAGTCAGGTGTGGAGTTTAGAAGGGAAATGCAAAGACACTCAGTGGCTGT
GCGACAGTTACTCCATTACAAGGGCCAGTTAGATGCTTTGAAGGGGGATGCCCTTAATAA
GGCTGTTCGAGACACGGCTCAAGAAACTATCTCTGCTATCTTTGCTGCAGAGGAAAATAA
GCCAGCACCTTCAGAAGATCTTAATAGACGAATTCAAGGTTTTGGGAATACAAACTATGA
GATGCCATCAGAAGATAAGAAATCATTTCTCAGTGAGGTAGTTGGTCTTGGAAGTACATC
TATCAAACAGGGAATTAGTAGTATCACACAAGGTCATTCGCTAAGGAAGAATGATAATGG
AAGCTACAAGAGTCCAAATCTTCGAAGGTCATTGACTACAGAAATTGAGTACCAAGATAG
ATATGAAGGAGTTGAACATCAAAATGAAACCCAAAGTAGTTTTGGCAGCTCAAAGAATGT
TTCTGGTGGGCCTTGGAACCAGGATGTACGAATAACCAAGTCAGAAACTACCAACGGAGA
CTCCAGTTCAAGCTTTGCTGAGAGTAAGACCCGTGAGGAGAGATTATTGGAAACAATAGT
GACATCAGGAGGTGTACGTCTGCAGCCCACTCGAGATGCTATTCAGATTTTCCTCATAGA
AGCTGCAAAGTTGGATGCTTTGGCGTTAAGTCATGCCCTTGAATCAAAGCTCCATTCTCC
TCTGTGGCAGGTGCGGATGAAAGCTGTTTGTGTGCTTGACTCAATTTTGAGGAAAAAGGA
TGAAGAACAGTTTTCAACTGTAGCATCTTATTTTTGTGAAAACAAAGATGTTGTGTTGAA
ATGTTGCGAGTCTCCCCAAGCTTCACTGAGGGAAAAGGCAAACAAGGTGTTAAGCCTTTT
GGGTGGAGAGCAAACAGGCAGCACAATGAGCCCTCCTGAAAAGCCACTGAAGACTGAGAC
AGTGCCTGCAGTTCAGATGCCTGACTTAATAGACACTGGTGGTCCAGATGATTACTATGG
GGCAGAAGATTCTATAAAAACCCAAAGTGATCAAAGTGTACCAAATTTGACAACATCAAC
CAGCCCTCTAATTGATGATTTATTTGGAGATGGTCTTGGTGTTAGTGAGAACACTGGTGA
ACAAAAAAATGATGACGATCCCTTTGCAGATGTCTCATTTCTCAGTGGCGAGGCTAGAGA
ACAGGTAGATGACCTCTTTTCAGGAATGACTGTTGATGATAAAGTGGGTGCTAATGAGAT
TCCTAAGGCAGCAACTAGTAATGAACCTGAACTATTTGATATTTTTGGGTCAAATGCTGA
ACTTCCTCAGGAGCAAGAAAATCATAAAAAGGATGTTAATGATTTAATGGCTGGTTTATC
CATTAATGGAAATGTCTCAAATACGACACAGAAAGGAATGCTTCCTGGGGCACTCTCTGA
GACTGTGTTCTCAGATTCAAATAGTTACTCCCCCAAGCAAGTCTCCAATGATGCTTTGAA
TGGTTTTGGTTCTGAAACGGCTGGCATGAATGCAAATGCCATGTTTCCTTTGGGTTCAAT
GCCCTATAATATCCCTCCAGGCATTATGTTCAATCCAGCTTTTCCTTCTCAACCAATGAA
TTATGGTGCCATGGGGAATTTCTTTGCCCAGCAGCAGTTCCTAGCAGCAATGTCCAACTT
TCAGCAGCTGGGGAACCTGACTTCTCAAAGTGCTGGCATGGGTCATGCTGGTGGAACAAT
GGAAGGAGGATATTCTTCACCCCTCCCTGACATTTTTCATCCACATATTCCTACTCAAAG
TCCCACTGCAGTAATGACCAGTTCAAAGAAAGAGGAGACAAAAGCATTTGATTTTATCTC
TGATCATCTGGCTGCTGCTCGAGATCCAAAGAGGGTGATTTGAATTGGAGCTCTTACGCT
GAACACGTCAATGATGACATGTTTATTTTTAGGCAAGTATATCGCAGCTGGTTATTTTCT
TTCAACTGAGAAGCTGAATTCTTTTGCAATAATGGGACATCTGGAGATGTTAAAAGAGTC
ATGTTTCAATGAAAATAGGACTGTAACTTATAAAACGGGGAAAATCCCACAACTGAAAAG
GAAAGAGAGTGGAAAAATTGCAGATTTGTGGTGTAGTGGAAGATGGAAGAAGAGTGAGAG
AATGTGGTTGTGTAAGTTTGGTTTCTCAACTTTGGGTATTCTGTAAGTGGAGGCACTCCT
TGCTTTTCTTTACATTGTAATGGATTTGTAGAGTTGTTTCTTTATAACCTTTCTTCTATG
AGGAATGCTTGTGGTAGATACATTTGTTGGATTGAGGGATCTGTTTTTATGTTGATTCAA
CACACTTTCAGACCCAATCTATTATTTGATTAGATTATTGAGTCACTTGTTTCTTTCGA