Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g03770.t01
CDS Infomation

cds chromosome:12X:9:3450819:3456229:1 gene:VIT_09s0002g03770 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP35 [Source:UniProtKB/TrEMBL;Acc:D7U0D6]
Sequence

ATGAGCACAACAGTACAGAGAACCCCCAGGTCGGGAAGACAGTCATTGTTTTTCCAGGAT
TTGGCATCTCCTGTTTCTTCCAGGAGAGGAAAATTCACAAGTTCAGGTCAGGCAGCAGCA
GTATCGGCACTATGGCATGACAATTTTGCGGGTTCAGATCTTCCACCCCCTCCTATGTAT
ACCTTGGAAGACCGCTCAGATTTTTCTCCTGAATCTGGAATTCTGGATTACCCAGTATCC
CCTGAAATCAAGTCAGACTTGAGGACTCCTGTTCATGGTTCTGGTCGGGATTTTTTAACT
CCAGTAAAAGGCAAATCTGAGGCAAGCACTTCTTCAGCAAGTTTGAGCTGGTGGTCCCCT
GCTAAGTCTGGTGGTGATCAAGAAGAGAAAGGAAAGGGTTCTCCTGTAGAGGGTGTGGTT
CAGCCTGGTGCTTTAATAACGCTTCCACCCCCGAGGGAAGTTGCAAGGCCTGAGATGCAG
AGGAATTGCTTACCTGCAGGGAATCTTGATGAGGAAGAATGGGTTACTGTTTATGGATTT
TCCCCAGGGGATACTAATTTAGTTCTGCGAGAGTTTGAAAAGTGCGGTGTGATTTTGAAA
CATGTGCCAGGCCCACGAGATGCTAATTGGATACACATTTTATATCAGAATCGATCTGAT
GCTCAGAAAGCTCTCAGCAAGAATGGGATGCAAATAAATGGAGTTCTTATTGTGGGCGTG
AAACCATTGGATCCAATGCAGCGCCAGGCTCTGAATGAAAGGCTTAACAATCAAGGATTT
ATGACTTTACCCCCTCCAGCATCCAGTAGAAGCTTGGAGTCAAACCCTTTGAGAGTCTCT
CCTCGCCCTTATTATCTTCAAAATGGAAGTAATGCCCGACAGTCATCTGGTGCCATTGCT
TCTCCAGCAAAATCAGTGGTGTCAAAGATCATGGATTTGATGTTTGGTGTGTAG

Peptide Sequence

PEP ID

VIT_09s0002g03770.t01
PEP Infomation

pep chromosome:12X:9:3450819:3456229:1 gene:VIT_09s0002g03770 transcript:VIT_09s0002g03770.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP35 [Source:UniProtKB/TrEMBL;Acc:D7U0D6]
Sequence

MSTTVQRTPRSGRQSLFFQDLASPVSSRRGKFTSSGQAAAVSALWHDNFAGSDLPPPPMY
TLEDRSDFSPESGILDYPVSPEIKSDLRTPVHGSGRDFLTPVKGKSEASTSSASLSWWSP
AKSGGDQEEKGKGSPVEGVVQPGALITLPPPREVARPEMQRNCLPAGNLDEEEWVTVYGF
SPGDTNLVLREFEKCGVILKHVPGPRDANWIHILYQNRSDAQKALSKNGMQINGVLIVGV
KPLDPMQRQALNERLNNQGFMTLPPPASSRSLESNPLRVSPRPYYLQNGSNARQSSGAIA
SPAKSVVSKIMDLMFGV

Transcript Sequence

Transcript ID

VIT_09s0002g03770.t01
Transcript Infomation

cdna chromosome:12X:9:3450819:3456229:1 gene:VIT_09s0002g03770 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore complex protein NUP35 [Source:UniProtKB/TrEMBL;Acc:D7U0D6]
Sequence

GGAAAACGTAAAACGCAGATACCTTAGTTCCTTCTGGAAATATCAAAACAATGAGCACAA
CAGTACAGAGAACCCCCAGGTCGGGAAGACAGTCATTGTTTTTCCAGGATTTGGCATCTC
CTGTTTCTTCCAGGAGAGGAAAATTCACAAGTTCAGGTCAGGCAGCAGCAGTATCGGCAC
TATGGCATGACAATTTTGCGGGTTCAGATCTTCCACCCCCTCCTATGTATACCTTGGAAG
ACCGCTCAGATTTTTCTCCTGAATCTGGAATTCTGGATTACCCAGTATCCCCTGAAATCA
AGTCAGACTTGAGGACTCCTGTTCATGGTTCTGGTCGGGATTTTTTAACTCCAGTAAAAG
GCAAATCTGAGGCAAGCACTTCTTCAGCAAGTTTGAGCTGGTGGTCCCCTGCTAAGTCTG
GTGGTGATCAAGAAGAGAAAGGAAAGGGTTCTCCTGTAGAGGGTGTGGTTCAGCCTGGTG
CTTTAATAACGCTTCCACCCCCGAGGGAAGTTGCAAGGCCTGAGATGCAGAGGAATTGCT
TACCTGCAGGGAATCTTGATGAGGAAGAATGGGTTACTGTTTATGGATTTTCCCCAGGGG
ATACTAATTTAGTTCTGCGAGAGTTTGAAAAGTGCGGTGTGATTTTGAAACATGTGCCAG
GCCCACGAGATGCTAATTGGATACACATTTTATATCAGAATCGATCTGATGCTCAGAAAG
CTCTCAGCAAGAATGGGATGCAAATAAATGGAGTTCTTATTGTGGGCGTGAAACCATTGG
ATCCAATGCAGCGCCAGGCTCTGAATGAAAGGCTTAACAATCAAGGATTTATGACTTTAC
CCCCTCCAGCATCCAGTAGAAGCTTGGAGTCAAACCCTTTGAGAGTCTCTCCTCGCCCTT
ATTATCTTCAAAATGGAAGTAATGCCCGACAGTCATCTGGTGCCATTGCTTCTCCAGCAA
AATCAGTGGTGTCAAAGATCATGGATTTGATGTTTGGTGTGTAGACAAACAAACCGGTTT
CTTGCTCTCTTATTTGTGCTTTTATGGTGTGCTTTCTTCTGATGGCAAAACATGCATGAT
GAGATAGTAATATTAGAATTGAGGTTTAGGAGCGCATCTTTTCAGCTTTCATCGGCTTCT
GACAAGGGTCTTTTGGAAGTTCCATTGTTGGCCCAGATCGGCAGGTTAAATTCTTGTTGT
GGTTATGGTTATTGGCTAAAAATATAGATGACCTATTATTCCAGATTGAGAAATGTTACC
AATTCCTCCGGGTTCAGAAATTGTTCATTTCTTTTTGTTATGGTCATGGGGCTTGTATAA
GGTCTTACAAGACCACTCCTTGAATGTTGTGACAGCAGATTATCAATTGAGATCAAAATT
TAAGTA