Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g02500.t01
CDS Infomation

cds chromosome:12X:9:2277241:2298342:-1 gene:VIT_09s0002g02500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCTACAGTGAGTGTAAAGTGGCAAAAAGAGTTCTTTCCAGCTGTGGAAATTGACACT
ACCCAGTCCCCATATGTTTTTAAATGCCAGTTGTTTGATCTAACAGGAGTACCGCCGGAA
AGGCAGAAGATCATGGTCAAAGGTGGTTTACTTAAGGATGATGCAGATTGGTCAACCTTA
GGAGTAAAAGAGGGTCAAAAATTGATGATGATGGGAACTGCAGATGAGATTGTTAAGGCC
CCGGAGAAGGGCCCTGTTTTCATGGAGGATCTTCCTGAAGAAGAGCAAGTGGTAGCTGTG
GGTCACAGTGCTGGTTTATTTAATCTGGGAAACACCTGCTACATGAACTCTACAGTACAG
TGCTTGCATTCAGTTCCAGAGTTGAAGTCAGCTTTAATCAAGTATCCGCATTCTGGAAGA
AGCAATGATTTGGATCAGCCTTCTCATATGTTGACTTGTGCAACACGTGATTTATTTAGT
GAGCTTGATAAAAATGTCAAGCCTGTGGCGCCCATGCAGTTTTGGATGGTATTGCGTAAA
AAATATCCTCAATTTGGCCAGCTGCATAATGGTGTCTTCATGCAACAGGATGCTGAGGAA
TGTTGGACACAACTTTTATACACTCTTTCTCAGTCACTTAGATCACCTGGTTCCAGTGAA
AATCTCGATACTGTGAAGGAACTTTTTGGTGTTGAACTTGTTAGCAGGATGCATTGCGAA
GAAAGTGGTGAAGAGAGCTCAGAGACTGAATCAGTTTATTCACTTAAATGCCACATATCA
CACGAGGTGAACCATTTGCATGAAGGACTAAAACACGGTCTGAAATCAGAGTTGGAGAAG
GCTTCTCCTTCTCTGGGGCGTAGTGCAATTTATGTGAAAGAGTCACGTATCAATGGCTTG
CCAAGGTACTTGACCATTCAGTTTGTTCGTTTTTTCTGGAAAAGGGAGTCGAATCAGAAG
GCAAAGATTTTGCGGAAAGTGGACTATCCACTAGAATTGGATGTTTATGATCTCTGTTCG
GATGATCTTCGCAAAAAATTGGAAGCCCCTCGACAAATTCTAAGGGATGAGGAAGGTAAA
AAGCTTGGTTTGAAGAACTCTGCTTCGAAGGACAATGATGTCAAGATGGCTGATGCAGAG
GGATCGTCAAATAGAAGCGGTGAATCATCTTTAGCTACATCTGATGAAGGCGTTCCAACC
GACAAGGAAACACACTTGACTGGAATTTATGATCTGGTTGCTGTGTTGACCCACAAGGGC
AGGAGTGCTGATTCAGGGCATTATGTTGCCTGGGTCAAGCAAGAAAGTGGAAAATGGATT
GAGTTTGATGATGATAATCCAATCCCACAGCGAGAGGAAGACATCACTAAACTGTCTGGA
GGAGGCGACTGGCATATGGCATACATTTGCATGTACAAGGCCCGCACCATCCCCATGTAA

Peptide Sequence

PEP ID

VIT_09s0002g02500.t01
PEP Infomation

pep chromosome:12X:9:2277241:2298342:-1 gene:VIT_09s0002g02500 transcript:VIT_09s0002g02500.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPTVSVKWQKEFFPAVEIDTTQSPYVFKCQLFDLTGVPPERQKIMVKGGLLKDDADWSTL
GVKEGQKLMMMGTADEIVKAPEKGPVFMEDLPEEEQVVAVGHSAGLFNLGNTCYMNSTVQ
CLHSVPELKSALIKYPHSGRSNDLDQPSHMLTCATRDLFSELDKNVKPVAPMQFWMVLRK
KYPQFGQLHNGVFMQQDAEECWTQLLYTLSQSLRSPGSSENLDTVKELFGVELVSRMHCE
ESGEESSETESVYSLKCHISHEVNHLHEGLKHGLKSELEKASPSLGRSAIYVKESRINGL
PRYLTIQFVRFFWKRESNQKAKILRKVDYPLELDVYDLCSDDLRKKLEAPRQILRDEEGK
KLGLKNSASKDNDVKMADAEGSSNRSGESSLATSDEGVPTDKETHLTGIYDLVAVLTHKG
RSADSGHYVAWVKQESGKWIEFDDDNPIPQREEDITKLSGGGDWHMAYICMYKARTIPM

Transcript Sequence

Transcript ID

VIT_09s0002g02500.t01
Transcript Infomation

cdna chromosome:12X:9:2277241:2298342:-1 gene:VIT_09s0002g02500 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTTGCCCTCTCTGCAAGCTAAAACAGCAACACCTGAATCCTTCTGTCTCTGTGTGGATC
CTTCCTATCCACGAGCTTTTCAACCATGCCTACAGTGAGTGTAAAGTGGCAAAAAGAGTT
CTTTCCAGCTGTGGAAATTGACACTACCCAGTCCCCATATGTTTTTAAATGCCAGTTGTT
TGATCTAACAGGAGTACCGCCGGAAAGGCAGAAGATCATGGTCAAAGGTGGTTTACTTAA
GGATGATGCAGATTGGTCAACCTTAGGAGTAAAAGAGGGTCAAAAATTGATGATGATGGG
AACTGCAGATGAGATTGTTAAGGCCCCGGAGAAGGGCCCTGTTTTCATGGAGGATCTTCC
TGAAGAAGAGCAAGTGGTAGCTGTGGGTCACAGTGCTGGTTTATTTAATCTGGGAAACAC
CTGCTACATGAACTCTACAGTACAGTGCTTGCATTCAGTTCCAGAGTTGAAGTCAGCTTT
AATCAAGTATCCGCATTCTGGAAGAAGCAATGATTTGGATCAGCCTTCTCATATGTTGAC
TTGTGCAACACGTGATTTATTTAGTGAGCTTGATAAAAATGTCAAGCCTGTGGCGCCCAT
GCAGTTTTGGATGGTATTGCGTAAAAAATATCCTCAATTTGGCCAGCTGCATAATGGTGT
CTTCATGCAACAGGATGCTGAGGAATGTTGGACACAACTTTTATACACTCTTTCTCAGTC
ACTTAGATCACCTGGTTCCAGTGAAAATCTCGATACTGTGAAGGAACTTTTTGGTGTTGA
ACTTGTTAGCAGGATGCATTGCGAAGAAAGTGGTGAAGAGAGCTCAGAGACTGAATCAGT
TTATTCACTTAAATGCCACATATCACACGAGGTGAACCATTTGCATGAAGGACTAAAACA
CGGTCTGAAATCAGAGTTGGAGAAGGCTTCTCCTTCTCTGGGGCGTAGTGCAATTTATGT
GAAAGAGTCACGTATCAATGGCTTGCCAAGGTACTTGACCATTCAGTTTGTTCGTTTTTT
CTGGAAAAGGGAGTCGAATCAGAAGGCAAAGATTTTGCGGAAAGTGGACTATCCACTAGA
ATTGGATGTTTATGATCTCTGTTCGGATGATCTTCGCAAAAAATTGGAAGCCCCTCGACA
AATTCTAAGGGATGAGGAAGGTAAAAAGCTTGGTTTGAAGAACTCTGCTTCGAAGGACAA
TGATGTCAAGATGGCTGATGCAGAGGGATCGTCAAATAGAAGCGGTGAATCATCTTTAGC
TACATCTGATGAAGGCGTTCCAACCGACAAGGAAACACACTTGACTGGAATTTATGATCT
GGTTGCTGTGTTGACCCACAAGGGCAGGAGTGCTGATTCAGGGCATTATGTTGCCTGGGT
CAAGCAAGAAAGTGGAAAATGGATTGAGTTTGATGATGATAATCCAATCCCACAGCGAGA
GGAAGACATCACTAAACTGTCTGGAGGAGGCGACTGGCATATGGCATACATTTGCATGTA
CAAGGCCCGCACCATCCCCATGTAATCTCTCTGATCTCATAAATTTAGTTTGAAGTGTCT
ATTGATTTACATCATACAGGGATCCTCATGGTTGATTAAGAATTATAAAATGGGATTATA
GATTTTACAGAATTGTATTGTACTGTTGAAGTTGTCAAATACGTGAGCTGAAACCTCCGT
TTTAGGGCGTGCCATAAATTTATGAATTTTACTTTGTTATA