Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g02300.t01
CDS Infomation

cds chromosome:12X:9:2108411:2110849:-1 gene:VIT_09s0002g02300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTAATTTGACTTCAGCATCTGGTGAAGCAAGTGTTTCTTCTGGAAATAGAGCTGAA
ACTGCCCCCATGTATCCTCAACAACAATACTTTGCTCCACCAAATCAAGCTCAAGCTCAA
GTTCAAGCTCAGCCTTCAGTGAAGAAGAAGAGAAACCTGCCAGGAAACCCAGACCCAGAT
GCAGAAGTGATAGCTTTGTCACCCAAAACACTCATGGCAACAAACAGATTTGTGTGTGAG
ATCTGCAACAAAGGGTTCCAGAGGGACCAGAATCTTCAGCTTCATAGAAGAGGGCATAAT
CTTCCATGGAAACTGAAGCAAAGAACAAGCAAAGAGGTGAGGAAGAAGGTGTATGTGTGC
CCAGAAGCCAGTTGTGTGCACCATGACCCATCAAGAGCTCTAGGGGACCTGACAGGAATC
AAGAAGCACTTTTGCAGAAAGCATGGTGAGAAGAAGTGGAAATGTGACAAGTGCTCAAAG
AGGTATGCAGTTCAATCAGACTGGAAAGCTCACTCCAAGACTTGTGGCACTAGAGAGTAC
AGATGTGACTGTGGAACCCTTTTCTCAAGGAGGGATAGTTTCATAACTCACAGAGCTTTC
TGTGATGCTTTGGCAGAGGAGAGTGCAAGGGCAATCACTGGGAACCCAGTTCTACTTTCC
TCACAAGCTGCTGCAGGGCCATCATCATCAACACCCCATTCTCATTCTCAGATGAGCCTC
CAGCAACAACAACAATTCAACAGCAACCATGATTTCCATGCATTTCAGATGAAGAAAGAG
CAGCAAAGTTTCAGTATAAGGTCTGAGGTGGTACCACCATGGCTTTCATCATCTTCTTCA
TTGTTCCCAACAAGGTTAGACCATGACTTCACACAGACAACCCAAGATTTGGCTCTCCAT
GACATTCAAAACCCTAACCCTAACCCTAGCCTTGGCCCCACTCTTCCTCCATACCATCCA
ACACTCTCCCCACACATGTCTGCTACTGCATTACTGCAAAAGGCAGCTCAAATGGGTGCA
ACAATGAGCAAGACTACTGGTGGTTCTGGTGCTTCACCACCAGCCATGATCAGACCCCAC
CAAGCTCACGTGTCTGCTGATCACTCTTGTAACAATACAACTGGTTTTGGGTTGAATTTG
TCTTCACGTGAAGAGATGGGTGGTGGGTTTGTCCAAGGCTTGGCCCCTTTTGGGAATAAA
GCTGCTGCAGTTCCTTCTGCTGCTGCAGCTGCAGCTGCTGCTACAGGCCCAGGTGGTGGT
GCTCCATCTCCTTCTCTTCTTCTTCAAGACATGATGACTTCTCTGTCTTCTGCAACTGGG
TTTGACTCCTCCTCCTTTGAAGATGCTTTTGGTGGTATGCTGAATTCAAGGAAAAATGGC
AACAATCTCCACCAAACTCTTCCATCAAAATCAACAACCACCACCGCCACCACCCACCAT
AGCAGTGGTGGTGCTGGAAATGATGGTTTGACAAGAGATTTTCTGGGTCTAAGAGCTCTC
TCCCACAGCGACATTCTCAGTATAGCTGGCCTTGGAACCTGCATGAACACCTCTCCCCAT
GATCATCAGAATCAGACCCAAAAGCCATGGCAAGGTTAG

Peptide Sequence

PEP ID

VIT_09s0002g02300.t01
PEP Infomation

pep chromosome:12X:9:2108411:2110849:-1 gene:VIT_09s0002g02300 transcript:VIT_09s0002g02300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSNLTSASGEASVSSGNRAETAPMYPQQQYFAPPNQAQAQVQAQPSVKKKRNLPGNPDPD
AEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKKVYVC
PEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKRYAVQSDWKAHSKTCGTREY
RCDCGTLFSRRDSFITHRAFCDALAEESARAITGNPVLLSSQAAAGPSSSTPHSHSQMSL
QQQQQFNSNHDFHAFQMKKEQQSFSIRSEVVPPWLSSSSSLFPTRLDHDFTQTTQDLALH
DIQNPNPNPSLGPTLPPYHPTLSPHMSATALLQKAAQMGATMSKTTGGSGASPPAMIRPH
QAHVSADHSCNNTTGFGLNLSSREEMGGGFVQGLAPFGNKAAAVPSAAAAAAAATGPGGG
APSPSLLLQDMMTSLSSATGFDSSSFEDAFGGMLNSRKNGNNLHQTLPSKSTTTTATTHH
SSGGAGNDGLTRDFLGLRALSHSDILSIAGLGTCMNTSPHDHQNQTQKPWQG

Transcript Sequence

Transcript ID

VIT_09s0002g02300.t01
Transcript Infomation

cdna chromosome:12X:9:2108411:2110849:-1 gene:VIT_09s0002g02300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCCATGGCACATGATGCAATCCTAGGATTAAGATGATAAAAGGTCTGATAGCCCAACAAT
AATATCATCATCAACAGCCAGTTGTGGTGGAAGAGAACATGTCTAATTTGACTTCAGCAT
CTGGTGAAGCAAGTGTTTCTTCTGGAAATAGAGCTGAAACTGCCCCCATGTATCCTCAAC
AACAATACTTTGCTCCACCAAATCAAGCTCAAGCTCAAGTTCAAGCTCAGCCTTCAGTGA
AGAAGAAGAGAAACCTGCCAGGAAACCCAGACCCAGATGCAGAAGTGATAGCTTTGTCAC
CCAAAACACTCATGGCAACAAACAGATTTGTGTGTGAGATCTGCAACAAAGGGTTCCAGA
GGGACCAGAATCTTCAGCTTCATAGAAGAGGGCATAATCTTCCATGGAAACTGAAGCAAA
GAACAAGCAAAGAGGTGAGGAAGAAGGTGTATGTGTGCCCAGAAGCCAGTTGTGTGCACC
ATGACCCATCAAGAGCTCTAGGGGACCTGACAGGAATCAAGAAGCACTTTTGCAGAAAGC
ATGGTGAGAAGAAGTGGAAATGTGACAAGTGCTCAAAGAGGTATGCAGTTCAATCAGACT
GGAAAGCTCACTCCAAGACTTGTGGCACTAGAGAGTACAGATGTGACTGTGGAACCCTTT
TCTCAAGGAGGGATAGTTTCATAACTCACAGAGCTTTCTGTGATGCTTTGGCAGAGGAGA
GTGCAAGGGCAATCACTGGGAACCCAGTTCTACTTTCCTCACAAGCTGCTGCAGGGCCAT
CATCATCAACACCCCATTCTCATTCTCAGATGAGCCTCCAGCAACAACAACAATTCAACA
GCAACCATGATTTCCATGCATTTCAGATGAAGAAAGAGCAGCAAAGTTTCAGTATAAGGT
CTGAGGTGGTACCACCATGGCTTTCATCATCTTCTTCATTGTTCCCAACAAGGTTAGACC
ATGACTTCACACAGACAACCCAAGATTTGGCTCTCCATGACATTCAAAACCCTAACCCTA
ACCCTAGCCTTGGCCCCACTCTTCCTCCATACCATCCAACACTCTCCCCACACATGTCTG
CTACTGCATTACTGCAAAAGGCAGCTCAAATGGGTGCAACAATGAGCAAGACTACTGGTG
GTTCTGGTGCTTCACCACCAGCCATGATCAGACCCCACCAAGCTCACGTGTCTGCTGATC
ACTCTTGTAACAATACAACTGGTTTTGGGTTGAATTTGTCTTCACGTGAAGAGATGGGTG
GTGGGTTTGTCCAAGGCTTGGCCCCTTTTGGGAATAAAGCTGCTGCAGTTCCTTCTGCTG
CTGCAGCTGCAGCTGCTGCTACAGGCCCAGGTGGTGGTGCTCCATCTCCTTCTCTTCTTC
TTCAAGACATGATGACTTCTCTGTCTTCTGCAACTGGGTTTGACTCCTCCTCCTTTGAAG
ATGCTTTTGGTGGTATGCTGAATTCAAGGAAAAATGGCAACAATCTCCACCAAACTCTTC
CATCAAAATCAACAACCACCACCGCCACCACCCACCATAGCAGTGGTGGTGCTGGAAATG
ATGGTTTGACAAGAGATTTTCTGGGTCTAAGAGCTCTCTCCCACAGCGACATTCTCAGTA
TAGCTGGCCTTGGAACCTGCATGAACACCTCTCCCCATGATCATCAGAATCAGACCCAAA
AGCCATGGCAAGGTTAGCTCCTACATTCAACCTTTCCCTCATTCAATTTTCTCTCCTCTC
CTTTTTCCTCCTTTGTTCTCTATAGTTTCAATCTTCCCAAAGGGAAGGACCTCGAAAATT
CCTTATATTTCTATCTTATCCTCTTATCCCCTTTCCCCCTTTTTCCTTTAGATTGATCAA
ATGTCTGTAATTCTACATCTTCAATAACAAGACCTGCAAAAGGAGACCCCCTATAGCAAC
TTCTCCAACA