Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g02060.t01
CDS Infomation

cds chromosome:12X:9:1871334:1873326:-1 gene:VIT_09s0002g02060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGGAGGAACAAGATCGAATATCGTACCTGCCTGATGACATATTGATAAGAATCTTG
AGTTTACTTCCTACTAAGGAAATTGCTCGAACCAGTTTGCTCTCAAAGGCATGGCGAAAG
CTATCTCCTTTTTCCTCTCTCTCCGTTTTAATGTTTCAGTCTCCGGATTTCTTCCATTCA
CGTCGCAAAAACTTTGATGTCTCCTCATTCATCAATGCCATCGATTCCTCCCTAAGACTC
CGTCAGAAAGACGTAAGTCTTGCAAGACTTCAGCTCCGTCTGCATCTCAATGACATTGAA
TCAGAATCGCTGATAGACTCGTGGATCGACGCGGCACTTGAGAGGAAGGTGAAGGAGCTA
GATCTATATTTGCTACCTAGGTCAATACCAGAGCCTTACGGCTTGCCGGCTAAAATTTTT
TCTACCACAACAATTACAGTTCTCAGTTTAGAGCAATGTAGATTGGAAATCTGTGGTGAT
GTAGATCTTCCGGCGCTAAGAAAGTTGTGTTTAAGAAAAATCCTGTGTGATGAACAAGCA
ATTCGGCAACTGATATCAAGTTGCCCGTTGATCGAGGATTTGGATATTGTATCTTGCGGT
AAATTGAAAAAGCTTCATGTTTCGGGGCTTGCTAATCTACATAGGCTTGTAGTAACTTGC
TGTTATAATTTGAGAAGGATAGAAATCGATGCACCAAGCCTTCAATATTTTATGTATGAT
CATCAGAGAAGCTTGCTGTGTGACGTGGTCTGGACGCCCGGTGAATTTCTGAGAGAATTA
ATACTCCATGATCGACATATAACAAATGATTTGCTCCAAAATCTTGTCTCTGGAGTTCCG
AATCTTGAGCGATTGGAGATAGACTCCACTCGATTGCAAAGGATTGAGATTTCGCATCAT
CAGCTCAAGAGATTAGAACTAAGACTATCTGAATGGCAGAGGGAGGCGAAACTCAAGATT
GATGCCCCAAATCTCCAATCATTTACGTATTTGGGCTATAGAATGCCTTTAACCTCTATG
ATATCATCTATGAATACTTCATCTCTGCGGGAAGCCGAGATTCACTTCAGGAATTGTAAT
GATTATAGCCATTTTTTCATCCTTCAATTGAAGGAATTTTTTGAAAAATCGAAGAATTGC
CAAGTTATAAATTTACTCATAAAATCCAAAGAGGAGCTCATTATTCCCAGAAAGCTGAGG
CCAATTCCATCTCCCCCTGTTTATGATATCAAGCATTTACATTTAATAGTATATTACTGC
AGTAGATTCCAGTACATCATAGATCGCATGCTTTGGATGTGTCACCCTCAAACTTTATCA
ATTGAGACCAGTGCCAAGTTCTTAAAGGTCCTATATAACAAGTTTAGTAACAAAGAGGAG
AACCCCAAGTGTTGTACATCTTGTCCCACCAAATGCTGGCGGCATTATTTGGAAGATGTT
CAAATTGATGGTGATGAAAGCAGATTGGAAATTGACCAAATTTTTGCGATGCGAGAGTTA
TCTAAAAAATCTACGAATTGCAAAGTTAGGTTTAGATTAAAATGGCGATCTCAACTACTT
TAG

Peptide Sequence

PEP ID

VIT_09s0002g02060.t01
PEP Infomation

pep chromosome:12X:9:1871334:1873326:-1 gene:VIT_09s0002g02060 transcript:VIT_09s0002g02060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVEEQDRISYLPDDILIRILSLLPTKEIARTSLLSKAWRKLSPFSSLSVLMFQSPDFFHS
RRKNFDVSSFINAIDSSLRLRQKDVSLARLQLRLHLNDIESESLIDSWIDAALERKVKEL
DLYLLPRSIPEPYGLPAKIFSTTTITVLSLEQCRLEICGDVDLPALRKLCLRKILCDEQA
IRQLISSCPLIEDLDIVSCGKLKKLHVSGLANLHRLVVTCCYNLRRIEIDAPSLQYFMYD
HQRSLLCDVVWTPGEFLRELILHDRHITNDLLQNLVSGVPNLERLEIDSTRLQRIEISHH
QLKRLELRLSEWQREAKLKIDAPNLQSFTYLGYRMPLTSMISSMNTSSLREAEIHFRNCN
DYSHFFILQLKEFFEKSKNCQVINLLIKSKEELIIPRKLRPIPSPPVYDIKHLHLIVYYC
SRFQYIIDRMLWMCHPQTLSIETSAKFLKVLYNKFSNKEENPKCCTSCPTKCWRHYLEDV
QIDGDESRLEIDQIFAMRELSKKSTNCKVRFRLKWRSQLL

Transcript Sequence

Transcript ID

VIT_09s0002g02060.t01
Transcript Infomation

cdna chromosome:12X:9:1871334:1873326:-1 gene:VIT_09s0002g02060 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTTTCAGTAATGGTGGAGGAACAAGATCGAATATCGTACCTGCCTGATGACATATTGAT
AAGAATCTTGAGTTTACTTCCTACTAAGGAAATTGCTCGAACCAGTTTGCTCTCAAAGGC
ATGGCGAAAGCTATCTCCTTTTTCCTCTCTCTCCGTTTTAATGTTTCAGTCTCCGGATTT
CTTCCATTCACGTCGCAAAAACTTTGATGTCTCCTCATTCATCAATGCCATCGATTCCTC
CCTAAGACTCCGTCAGAAAGACGTAAGTCTTGCAAGACTTCAGCTCCGTCTGCATCTCAA
TGACATTGAATCAGAATCGCTGATAGACTCGTGGATCGACGCGGCACTTGAGAGGAAGGT
GAAGGAGCTAGATCTATATTTGCTACCTAGGTCAATACCAGAGCCTTACGGCTTGCCGGC
TAAAATTTTTTCTACCACAACAATTACAGTTCTCAGTTTAGAGCAATGTAGATTGGAAAT
CTGTGGTGATGTAGATCTTCCGGCGCTAAGAAAGTTGTGTTTAAGAAAAATCCTGTGTGA
TGAACAAGCAATTCGGCAACTGATATCAAGTTGCCCGTTGATCGAGGATTTGGATATTGT
ATCTTGCGGTAAATTGAAAAAGCTTCATGTTTCGGGGCTTGCTAATCTACATAGGCTTGT
AGTAACTTGCTGTTATAATTTGAGAAGGATAGAAATCGATGCACCAAGCCTTCAATATTT
TATGTATGATCATCAGAGAAGCTTGCTGTGTGACGTGGTCTGGACGCCCGGTGAATTTCT
GAGAGAATTAATACTCCATGATCGACATATAACAAATGATTTGCTCCAAAATCTTGTCTC
TGGAGTTCCGAATCTTGAGCGATTGGAGATAGACTCCACTCGATTGCAAAGGATTGAGAT
TTCGCATCATCAGCTCAAGAGATTAGAACTAAGACTATCTGAATGGCAGAGGGAGGCGAA
ACTCAAGATTGATGCCCCAAATCTCCAATCATTTACGTATTTGGGCTATAGAATGCCTTT
AACCTCTATGATATCATCTATGAATACTTCATCTCTGCGGGAAGCCGAGATTCACTTCAG
GAATTGTAATGATTATAGCCATTTTTTCATCCTTCAATTGAAGGAATTTTTTGAAAAATC
GAAGAATTGCCAAGTTATAAATTTACTCATAAAATCCAAAGAGGAGCTCATTATTCCCAG
AAAGCTGAGGCCAATTCCATCTCCCCCTGTTTATGATATCAAGCATTTACATTTAATAGT
ATATTACTGCAGTAGATTCCAGTACATCATAGATCGCATGCTTTGGATGTGTCACCCTCA
AACTTTATCAATTGAGACCAGTGCCAAGTTCTTAAAGGTCCTATATAACAAGTTTAGTAA
CAAAGAGGAGAACCCCAAGTGTTGTACATCTTGTCCCACCAAATGCTGGCGGCATTATTT
GGAAGATGTTCAAATTGATGGTGATGAAAGCAGATTGGAAATTGACCAAATTTTTGCGAT
GCGAGAGTTATCTAAAAAATCTACGAATTGCAAAGTTAGGTTTAGATTAAAATGGCGATC
TCAACTACTTTAGATTATTGGACTTCTTTACTCTCGTTTACTTTTTAATATAAGATTTTG
TATTTTCTTCATTAGGATTATATTAATGCATGTTATATTAATGCA