Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g01850.t01
CDS Infomation

cds chromosome:12X:9:1638319:1641659:1 gene:VIT_09s0002g01850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGAGATGTCTCCTGCAGTTTCTGTGACACTTAGTTTAGGTAGTACTTTATGTGAT
AATTCGGGAATTGCAACCCATGTGGAAATCACACAGCTCAAACTGGTAACAGATACTGTG
AGCTTGTTATCAAGCCCTGCAACTGTACTCTCTTCAGAGTCTGTTTGTAGTGGTGATGGA
ATTCGAAATGATGTTAAGAGTGAGCCCAATGGGGTAAGTGAATCCGAAGCAGAAGAAGAC
AGTGGTGGGCGAAGAGTGACTTTGTTGGAGATGGTACCTGAAAAGGGGAATGGTTGGATT
GATAGCGGTGACATGATTCAGCATAGCGAGGAAGATGAGATCTTAGCTGTAGTGGACAAC
ACCAGTAGAATTAGTCATGAGGACTTGTTGGCTTTGGTTGCTGGGTCCGAAATAAGCTTG
CCAAATTCTATGGAAATTGAAAATGTTGAACATGGTCAAATTGTTGCTAAGGCGATTATA
TTGCGGGAATCTTCTGAGAAGGTGCCTGCTGGTGAACTCCTTGCCGTGGCAGTGAACCCG
GATGCAGTGTTGTCTGGTGGGTCTGATTTGAAGGCATCTGCAGTGGTTTTTCAGTTGTCT
ACAGACAAGAATCTCAGCAAAGGAAGTGTGCGAAGTGTTTTCGAGCTGGATTGTATACCC
CTTTGGGGTTCTGTGTCAATCCAAGGGCAAAGACCAGAAATGGAGGATGCGGTTGCCGCT
GTTCCTCGGTTTATGGAAACTCCCATCAAAATGCTTATTGGCAATCGGGCAATCGATGGA
ATGAGCCAAAGATTCACCCACCTAACCACTCATTTTTTTGGGGTTTATGATGGCCATGGA
GGCTCTCAGGTTGCTAACTATTGTCGTGATCGAATCCATTTGGCTTTGGCTGAAGAAATA
GGAAGTATCAAGGACGATGTGGAGGATAACAGGCATGGGCTGTGGGAGAATGCCTTCACT
AGTTGCTTTCAAAAGGTTGATGATGAGATTGGGGGGGAAGTTAGCAGAGGCATCATTGAA
GGAAATGCAGATGTTTCAGATGTTTCTGATGCTAGTTTAGAGCCTATTGCTCCAGAAACT
GTTGGGTCTACAGCTGTGGTTGCCTTAATCTGTTCATCCCATATCATCATCGCCAACTGT
GGTGATTCAAGAGCAGTTCTATGTCGTGGCAAGGAGCCCATTGCACTATCAATTGATCAT
AGACCAAACAGAGAAGATGAATATGCAAGGATTGAGGCATCTGGAGGCAAGGTCATACAA
TGGAATGGCCATCGTGTTTTCGGCGTTCTTGCAATGTCGAGATCTATTGGTGATAGGTAT
CTGAAACCATGGATCATCCCAGAGCCAGAAGTCATGATGGTGCCTCGGGCTAGAGAAGAC
GACTGTCTCATCTTAGCCAGTGACGGGTTATGGGATGTCATGACAAACGAGGAAGTATGT
GAAGTAGCTCGAAGGCGGATTCTGCTGTGGCACAAAAAGAATGGAGTCGCATCCCTTGTA
GAAAGGGGCAAAGGAATCGACCCTGCAGCTCAGGCAGCAGCAGAGTACCTCTCAATGCTT
GCTATCCAAAAGGGAAGCAAGGACAACATATCTGTGATTGTGGTGGACTTGAAAGCTCAA
AGGAAGTTCAAGAGTAAACCCTCATAA

Peptide Sequence

PEP ID

VIT_09s0002g01850.t01
PEP Infomation

pep chromosome:12X:9:1638319:1641659:1 gene:VIT_09s0002g01850 transcript:VIT_09s0002g01850.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEEMSPAVSVTLSLGSTLCDNSGIATHVEITQLKLVTDTVSLLSSPATVLSSESVCSGDG
IRNDVKSEPNGVSESEAEEDSGGRRVTLLEMVPEKGNGWIDSGDMIQHSEEDEILAVVDN
TSRISHEDLLALVAGSEISLPNSMEIENVEHGQIVAKAIILRESSEKVPAGELLAVAVNP
DAVLSGGSDLKASAVVFQLSTDKNLSKGSVRSVFELDCIPLWGSVSIQGQRPEMEDAVAA
VPRFMETPIKMLIGNRAIDGMSQRFTHLTTHFFGVYDGHGGSQVANYCRDRIHLALAEEI
GSIKDDVEDNRHGLWENAFTSCFQKVDDEIGGEVSRGIIEGNADVSDVSDASLEPIAPET
VGSTAVVALICSSHIIIANCGDSRAVLCRGKEPIALSIDHRPNREDEYARIEASGGKVIQ
WNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMMVPRAREDDCLILASDGLWDVMTNEEVC
EVARRRILLWHKKNGVASLVERGKGIDPAAQAAAEYLSMLAIQKGSKDNISVIVVDLKAQ
RKFKSKPS

Transcript Sequence

Transcript ID

VIT_09s0002g01850.t01
Transcript Infomation

cdna chromosome:12X:9:1638319:1641659:1 gene:VIT_09s0002g01850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGACCTTGTTTTCAGGCTCAAACCCTTGAAGTTTCAAGTGGGTAAGTGCTCTTTGATCTG
TTTTCTGGGTTGTTTGTGTATTTCTTCAGCAGGATTGTGCCTATTCTCATGTAGGTTTTT
TCTGTGTAATGTGGGAATTTTGTTGTTGATTGTGTTTGGAGGTGTTTGTTGGTGGAAAAC
GGGAAGTGAAGGAGACCCATTTTTCAAGAGAGGGTGAGATGGGTTGCCTCAGATCCAGGG
AACCCAAGTTTTGTGGGAAAAAGTTCTGACCTTTTTAGGGTTTCCTTGTGATTCTTGGGT
CGGTTTCCCTTTTCTTTCCCATGAACCCTTTTGCTTTCCTTCTTGGGTTTATAGATAAGG
GTCTAATTTGGGTTTTGCTTTTTCACTGTATGTGAGGGCTTCTTGGTGGGAATAGGGTAT
AGGCCATTAGTGGTTGGTTCGGGAAATAATTTGATGAACTGTAGGGTCTTGAGGGCTCAA
ACTGCCTGTAAAAAGCTGGAAATATCTCTATGTGGAAGGCTAAATCCATTGTTCATCACC
AGATCTGATGACTCATTTGCGTTCTTCTGATATTTGGCTCGTCTCTGCTTTTGATTTGTT
ATCGGGGCTGTAATATTGTGTTTTCCCTGTATTCATTATTATAAAAAGAAATTGATGAGC
CATTGAGATTCTCTCTTATGGAATAGGAGTATTTGAAACTTGAAACTTCCAAGTTTTATA
CCAAGTCCATTGGTAGAAGGAGATGTTGGGAATGAGAATTGGCAGTTAGATAAACTCTGT
TGCTAGAGAAGATAATTGTCAATAGTACAGTGGGGAATTGATGGAAGAGATGTCTCCTGC
AGTTTCTGTGACACTTAGTTTAGGTAGTACTTTATGTGATAATTCGGGAATTGCAACCCA
TGTGGAAATCACACAGCTCAAACTGGTAACAGATACTGTGAGCTTGTTATCAAGCCCTGC
AACTGTACTCTCTTCAGAGTCTGTTTGTAGTGGTGATGGAATTCGAAATGATGTTAAGAG
TGAGCCCAATGGGGTAAGTGAATCCGAAGCAGAAGAAGACAGTGGTGGGCGAAGAGTGAC
TTTGTTGGAGATGGTACCTGAAAAGGGGAATGGTTGGATTGATAGCGGTGACATGATTCA
GCATAGCGAGGAAGATGAGATCTTAGCTGTAGTGGACAACACCAGTAGAATTAGTCATGA
GGACTTGTTGGCTTTGGTTGCTGGGTCCGAAATAAGCTTGCCAAATTCTATGGAAATTGA
AAATGTTGAACATGGTCAAATTGTTGCTAAGGCGATTATATTGCGGGAATCTTCTGAGAA
GGTGCCTGCTGGTGAACTCCTTGCCGTGGCAGTGAACCCGGATGCAGTGTTGTCTGGTGG
GTCTGATTTGAAGGCATCTGCAGTGGTTTTTCAGTTGTCTACAGACAAGAATCTCAGCAA
AGGAAGTGTGCGAAGTGTTTTCGAGCTGGATTGTATACCCCTTTGGGGTTCTGTGTCAAT
CCAAGGGCAAAGACCAGAAATGGAGGATGCGGTTGCCGCTGTTCCTCGGTTTATGGAAAC
TCCCATCAAAATGCTTATTGGCAATCGGGCAATCGATGGAATGAGCCAAAGATTCACCCA
CCTAACCACTCATTTTTTTGGGGTTTATGATGGCCATGGAGGCTCTCAGGTTGCTAACTA
TTGTCGTGATCGAATCCATTTGGCTTTGGCTGAAGAAATAGGAAGTATCAAGGACGATGT
GGAGGATAACAGGCATGGGCTGTGGGAGAATGCCTTCACTAGTTGCTTTCAAAAGGTTGA
TGATGAGATTGGGGGGGAAGTTAGCAGAGGCATCATTGAAGGAAATGCAGATGTTTCAGA
TGTTTCTGATGCTAGTTTAGAGCCTATTGCTCCAGAAACTGTTGGGTCTACAGCTGTGGT
TGCCTTAATCTGTTCATCCCATATCATCATCGCCAACTGTGGTGATTCAAGAGCAGTTCT
ATGTCGTGGCAAGGAGCCCATTGCACTATCAATTGATCATAGACCAAACAGAGAAGATGA
ATATGCAAGGATTGAGGCATCTGGAGGCAAGGTCATACAATGGAATGGCCATCGTGTTTT
CGGCGTTCTTGCAATGTCGAGATCTATTGGTGATAGGTATCTGAAACCATGGATCATCCC
AGAGCCAGAAGTCATGATGGTGCCTCGGGCTAGAGAAGACGACTGTCTCATCTTAGCCAG
TGACGGGTTATGGGATGTCATGACAAACGAGGAAGTATGTGAAGTAGCTCGAAGGCGGAT
TCTGCTGTGGCACAAAAAGAATGGAGTCGCATCCCTTGTAGAAAGGGGCAAAGGAATCGA
CCCTGCAGCTCAGGCAGCAGCAGAGTACCTCTCAATGCTTGCTATCCAAAAGGGAAGCAA
GGACAACATATCTGTGATTGTGGTGGACTTGAAAGCTCAAAGGAAGTTCAAGAGTAAACC
CTCATAAAACCTCACCCCTAATCTGGCTCTAATCCATATCCCTATATATGATAGAAAAAT
TACATATCCTTAATACCTAGCTTGGTCCATTCATTTTTCACATGGGCTTTACGTAGTTTG
TACAAGAATAGCAATTAGTATGTACTATA