Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g01650.t01
CDS Infomation

cds chromosome:12X:9:1487220:1492889:1 gene:VIT_09s0002g01650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACGACTTCTGTGAAGAACAACTTCTTGCCTCCAGGCCTCGTCTCCAATCTGCAGGAG
GTCCTGCTCAACAGAAAGGGCGGCAGCGAAAACGACCCCTCCAAGAGCAACGATGAATCC
ACCCAGCCCTCTTCTTCTGATGCTGTGGAGGCCAATTCGGATACCGAGTGTTCCAAGCCT
GTTGTTCTGGTCACCAACGCCGATGGTATTGAAGCTCCGGGTCTGAATTTTCTGGTTGAA
GCTCTGGTTCGTGACGGCCTCTGCAATGTCCACGTCTGCGCTCCTCAATCGGACAAATCA
GTGTCTGGTCATTCTGTGACACTACGAGAAACTGTTGCTGTGACTTCTGCTGAAATTAAT
GGGGCTACGGCCTATGAAGTTTCGGGAACTCCCGTGGATTGTGTCTCACTGGCTTTATCT
GGGGCATTGTTTTCCTGGTCAAAGCCTTTGCTGGTGATTAGTGGAATCAATAGGGGTTCG
TCTTGTGGTCATCATATGTTTTACTCAGGTGTTGTTGCTGGAGCTAGAGAGGCATTGTTT
TGCGGTGTGCCATCTATGTCGATATCACTGAATTGGAAGAAGGATGAAAGCCAAGAAAGT
GATTTCAAGGATGCAGTCACTGTCTGCTTACCATTAATAAATGCAGCTATAAGAGATATA
GAGAAGGGAGTTTTCCCCAAAAGTTGTTTGCTGAATATAGAAATTCCTGCCTCTCCTTTG
ACAAACAAGGGCTTCAAGTTGACCAAGCAAAGTCTCTGGAGATCTACTCCGAGCTGGCAA
GCTGTTTCCACTAACAGGCATCCTGCAGGGTTCATGTCTAATCAACAAAGCTTGGGTATC
CAGCTTGCACAACTCAGTCGAGATGCCTCTGCTGCTGGAGCAGCTCGCCGTTTGACCACT
CAAAGGAAGAATGTGGAAATTGTTGAATCAGTTGGAGTTGCAGGAAAAACTGATTTTAAT
CGTGTAAAGAAGTACTTCCGACTAGAGTTTGTTGACAAGGAGCAGGAAGGTTTGGACGAG
GATCTAGATTTCAGAGCACTTGAAAATGGATTTGTTGCAGTCACACCTCTATCTCTTTCT
CAGCATAATGAGTCAGACATTCATACGACTGCCTCAGAATGGATGAACACTGCACTACAG
CATGGGGAGCAATAA

Peptide Sequence

PEP ID

VIT_09s0002g01650.t01
PEP Infomation

pep chromosome:12X:9:1487220:1492889:1 gene:VIT_09s0002g01650 transcript:VIT_09s0002g01650.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTTSVKNNFLPPGLVSNLQEVLLNRKGGSENDPSKSNDESTQPSSSDAVEANSDTECSKP
VVLVTNADGIEAPGLNFLVEALVRDGLCNVHVCAPQSDKSVSGHSVTLRETVAVTSAEIN
GATAYEVSGTPVDCVSLALSGALFSWSKPLLVISGINRGSSCGHHMFYSGVVAGAREALF
CGVPSMSISLNWKKDESQESDFKDAVTVCLPLINAAIRDIEKGVFPKSCLLNIEIPASPL
TNKGFKLTKQSLWRSTPSWQAVSTNRHPAGFMSNQQSLGIQLAQLSRDASAAGAARRLTT
QRKNVEIVESVGVAGKTDFNRVKKYFRLEFVDKEQEGLDEDLDFRALENGFVAVTPLSLS
QHNESDIHTTASEWMNTALQHGEQ

Transcript Sequence

Transcript ID

VIT_09s0002g01650.t01
Transcript Infomation

cdna chromosome:12X:9:1487220:1492889:1 gene:VIT_09s0002g01650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTCTCTCTCTCTCTATCTATCTATCTCTGTTCATTGATGACGACTTCTGTGAAGAACA
ACTTCTTGCCTCCAGGCCTCGTCTCCAATCTGCAGGAGGTCCTGCTCAACAGAAAGGGCG
GCAGCGAAAACGACCCCTCCAAGAGCAACGATGAATCCACCCAGCCCTCTTCTTCTGATG
CTGTGGAGGCCAATTCGGATACCGAGTGTTCCAAGCCTGTTGTTCTGGTCACCAACGCCG
ATGGTATTGAAGCTCCGGGTCTGAATTTTCTGGTTGAAGCTCTGGTTCGTGACGGCCTCT
GCAATGTCCACGTCTGCGCTCCTCAATCGGACAAATCAGTGTCTGGTCATTCTGTGACAC
TACGAGAAACTGTTGCTGTGACTTCTGCTGAAATTAATGGGGCTACGGCCTATGAAGTTT
CGGGAACTCCCGTGGATTGTGTCTCACTGGCTTTATCTGGGGCATTGTTTTCCTGGTCAA
AGCCTTTGCTGGTGATTAGTGGAATCAATAGGGGTTCGTCTTGTGGTCATCATATGTTTT
ACTCAGGTGTTGTTGCTGGAGCTAGAGAGGCATTGTTTTGCGGTGTGCCATCTATGTCGA
TATCACTGAATTGGAAGAAGGATGAAAGCCAAGAAAGTGATTTCAAGGATGCAGTCACTG
TCTGCTTACCATTAATAAATGCAGCTATAAGAGATATAGAGAAGGGAGTTTTCCCCAAAA
GTTGTTTGCTGAATATAGAAATTCCTGCCTCTCCTTTGACAAACAAGGGCTTCAAGTTGA
CCAAGCAAAGTCTCTGGAGATCTACTCCGAGCTGGCAAGCTGTTTCCACTAACAGGCATC
CTGCAGGGTTCATGTCTAATCAACAAAGCTTGGGTATCCAGCTTGCACAACTCAGTCGAG
ATGCCTCTGCTGCTGGAGCAGCTCGCCGTTTGACCACTCAAAGGAAGAATGTGGAAATTG
TTGAATCAGTTGGAGTTGCAGGAAAAACTGATTTTAATCGTGTAAAGAAGTACTTCCGAC
TAGAGTTTGTTGACAAGGAGCAGGAAGGTTTGGACGAGGATCTAGATTTCAGAGCACTTG
AAAATGGATTTGTTGCAGTCACACCTCTATCTCTTTCTCAGCATAATGAGTCAGACATTC
ATACGACTGCCTCAGAATGGATGAACACTGCACTACAGCATGGGGAGCAATAAAGCTTTC
CTGGACCAGCCTGAGCAGTGGCTTTGTACATTTGAGGAGCAGTTCAGTTGATGATTTTAA
TTAGCAAAATTCAAAATGTATGTCGATTCTGATTGGTGCTCTGTCCTGTTCTTTTCCTTA
TTTATTTCTTCGTTCTTTTCCCTCTTAACTCAGTTTTTTTCTTAATCTTCTATTTTTGTT
ATGGAGCAAATGCTTCCCATAATATGTTTGGCTGTTGTAACACGATCCGTCTTCTTTGTT
TCTTGATACTGACAGAGTTGTGAGTTGGTCAGTCGGTCAGTCAGTCAGTCAGTTTGGAAG
AACTGGGGTTGGGTTCTTTGCCCTCTAAAAAGAACAGAACATTGGATGGGGTGGGGCTTG
TTTGTTTGTTTGGGTTGTAGTTGTTGATAGAGTATGTAATTGAAACTGGCCGGGTCTGAT
TTATTTGATCCAGAGCTTTGCTAGAAGGTTGTTGTTTCTTCTATCAGATATACCATGGAA
AACATTCTCCTATTTTTATCCTCATATGGTGTGTTTGGAACTAAATATTATCAAAGGATT
CTCTCCTTTTAACATTA