Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g01190.t01
CDS Infomation

cds chromosome:12X:9:910682:912662:-1 gene:VIT_09s0002g01190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACCATTGAAGAACCTGAGCCTAACCCCACTTCTGATCACATCCTGGATTGGCTGGAG
GATTCGGTTTCGTTTCTTCCGTCTTTCTTGGATGATCCCTACGGCTCCGGCGATATCAGC
AGCTATCAATGGTGGGATCAGGGCCAGGAGCTGGACCAGGATTTTACTAGTTATACTGAT
AATTCAATCAACTGCAACTCCGCTGCCGTCGCCGGTGCTGTAACTCCCTGTGATCCTGCG
AGTGTTGATCATCTCCAACTGTCTGATTCGTCGAAGAAGAGGAAATCCCCGGATGACCCA
GCTCCCAGAGTGGCCCCAAATCATCAGAGAAAGAATCAGGGCCGGCGCGCTAGTGAGACT
GAAGATGGGGATGCGGTTGAGGAGGCTGTGGCAGCGAAGAAATCCGTCGGAAGCAAGAAA
GCCACAGGTAAGGCTACAGGGAATAACTGTAATAACAGTAATAGCAAGGAAGGGAGGTGG
GCTGAGCAGCTGCTCAACCCCTGCGCCACCGCCATCACCGCTGGAAATCTATCCCGTGTT
CAGCACCTCTTGTATGTCCTCCATGAGCTGGCATCCTCCACCGGCGACGCCAACCACCGG
CTGGCTGATCATGGCCTGAGAGCCCTGTCCCACCACCTATCCTCCTCTGTCTCTGTAGGG
CCTATCACCTTTTCTTCCACAGAGCCGAGGTTTTTCCAGCGATCCCTTCTCAAATTCTAT
GAGGTTAGTCCCTGGTTCGCCTTCCCCAACAATATTGCAAATACATCCATCCTGCAAATT
CTCAATGGGGTGCCATCCCGCTCGCGAAATCTTCACATCCTTGATATTGGAGTCTCCCAT
GGTGTGCAATGGCCGACGCTGCTCGAGGCCTTGAGTCGTCGGTCTGGCGGCCCTCCTCCA
CTGGTTCGCCTCACGGTCATCGCCGCCACCAGTGACAATGATCAGAACACAGAGACCCCA
TTTTCAATAGCTCCACCAGGGGACAACTTCTCGGCCAGACTCCTCTCCTTTGCCAAGTCC
ATGAACATCAATCTGCAGATCAACAGGCTTGACAACCACCCATTACAAAGCCTCAGTCCC
CAGCTCATCGACACCTCCCCTGATGAAACCCTAATCGTTTGCGCGCAGTTCAGGCTGCAC
CATCTGAATCACAACACCCCTGATGAAAGAACTGAGTTCTTGAAGGTACTGAGGAAGCTG
GAGCCAGAAGCAGTTATTCTAAGTGAAAACAACATGGACTGCAGCTGCACCAACTGCGGG
GACTTTGCAACTGGGTTCTCCAGGAGGATAGAGTACTTATGGAAGTTTCTGGATTCGACA
AGTGCAGCATTCAAGGGCCGAGAAAGTGAAGAGAGAAGGGTGATGGAAGGAGAAGCTGCC
AGGGCATTGACAAACCCAGGAGAGATGAATGAGGGAAAAGAGAAATGGTGTGAGAGAATG
CGGGGGGTCGGGTTTGCAGGAGAGGTATTTGGGGAGGACGCCATTGATGGAGCTCGGGCG
TTGTTGAAGAAGTACGACAGCAACTGGGAAATGAGAGTAGAAGAGAAAGATGGGTGTGTG
GGGTTGTGGTGGAAAGGGCTACCTGTTTCCTTTTGTTCACTCTGGAGGCTGGAGGATACC
AAACCAAATAACAGTTAG

Peptide Sequence

PEP ID

VIT_09s0002g01190.t01
PEP Infomation

pep chromosome:12X:9:910682:912662:-1 gene:VIT_09s0002g01190 transcript:VIT_09s0002g01190.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTIEEPEPNPTSDHILDWLEDSVSFLPSFLDDPYGSGDISSYQWWDQGQELDQDFTSYTD
NSINCNSAAVAGAVTPCDPASVDHLQLSDSSKKRKSPDDPAPRVAPNHQRKNQGRRASET
EDGDAVEEAVAAKKSVGSKKATGKATGNNCNNSNSKEGRWAEQLLNPCATAITAGNLSRV
QHLLYVLHELASSTGDANHRLADHGLRALSHHLSSSVSVGPITFSSTEPRFFQRSLLKFY
EVSPWFAFPNNIANTSILQILNGVPSRSRNLHILDIGVSHGVQWPTLLEALSRRSGGPPP
LVRLTVIAATSDNDQNTETPFSIAPPGDNFSARLLSFAKSMNINLQINRLDNHPLQSLSP
QLIDTSPDETLIVCAQFRLHHLNHNTPDERTEFLKVLRKLEPEAVILSENNMDCSCTNCG
DFATGFSRRIEYLWKFLDSTSAAFKGRESEERRVMEGEAARALTNPGEMNEGKEKWCERM
RGVGFAGEVFGEDAIDGARALLKKYDSNWEMRVEEKDGCVGLWWKGLPVSFCSLWRLEDT
KPNNS

Transcript Sequence

Transcript ID

VIT_09s0002g01190.t01
Transcript Infomation

cdna chromosome:12X:9:910682:912662:-1 gene:VIT_09s0002g01190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTCCAACTTTTAAAGCCCCTCACCATCTCCAATCAAGTTTGGCGGATCTCCATCACCA
TGACATATACAAATGAATAAGTTAATACCCCAACAAAAAAACAAAGAAACCCATGTTTCT
ACCCTCTTATAGGCTTTAAAAAAACCTTAATAACAACATCACATCTTCCAAGTACACACC
ACCCCCACCTACTTCAATATGCTCTCCATCGTCTCTTCCAAAAAACCATCACCCCCCATT
TCATTATTTTAATGGTGTTTCACACCCTCTCTTATCTTCCTCTTTGGTCAATGATCAAAC
AGTTCTACACCCCTTCTCTTCTTCGTCTTATTTTTCCCCCACAATGACCATTGAAGAACC
TGAGCCTAACCCCACTTCTGATCACATCCTGGATTGGCTGGAGGATTCGGTTTCGTTTCT
TCCGTCTTTCTTGGATGATCCCTACGGCTCCGGCGATATCAGCAGCTATCAATGGTGGGA
TCAGGGCCAGGAGCTGGACCAGGATTTTACTAGTTATACTGATAATTCAATCAACTGCAA
CTCCGCTGCCGTCGCCGGTGCTGTAACTCCCTGTGATCCTGCGAGTGTTGATCATCTCCA
ACTGTCTGATTCGTCGAAGAAGAGGAAATCCCCGGATGACCCAGCTCCCAGAGTGGCCCC
AAATCATCAGAGAAAGAATCAGGGCCGGCGCGCTAGTGAGACTGAAGATGGGGATGCGGT
TGAGGAGGCTGTGGCAGCGAAGAAATCCGTCGGAAGCAAGAAAGCCACAGGTAAGGCTAC
AGGGAATAACTGTAATAACAGTAATAGCAAGGAAGGGAGGTGGGCTGAGCAGCTGCTCAA
CCCCTGCGCCACCGCCATCACCGCTGGAAATCTATCCCGTGTTCAGCACCTCTTGTATGT
CCTCCATGAGCTGGCATCCTCCACCGGCGACGCCAACCACCGGCTGGCTGATCATGGCCT
GAGAGCCCTGTCCCACCACCTATCCTCCTCTGTCTCTGTAGGGCCTATCACCTTTTCTTC
CACAGAGCCGAGGTTTTTCCAGCGATCCCTTCTCAAATTCTATGAGGTTAGTCCCTGGTT
CGCCTTCCCCAACAATATTGCAAATACATCCATCCTGCAAATTCTCAATGGGGTGCCATC
CCGCTCGCGAAATCTTCACATCCTTGATATTGGAGTCTCCCATGGTGTGCAATGGCCGAC
GCTGCTCGAGGCCTTGAGTCGTCGGTCTGGCGGCCCTCCTCCACTGGTTCGCCTCACGGT
CATCGCCGCCACCAGTGACAATGATCAGAACACAGAGACCCCATTTTCAATAGCTCCACC
AGGGGACAACTTCTCGGCCAGACTCCTCTCCTTTGCCAAGTCCATGAACATCAATCTGCA
GATCAACAGGCTTGACAACCACCCATTACAAAGCCTCAGTCCCCAGCTCATCGACACCTC
CCCTGATGAAACCCTAATCGTTTGCGCGCAGTTCAGGCTGCACCATCTGAATCACAACAC
CCCTGATGAAAGAACTGAGTTCTTGAAGGTACTGAGGAAGCTGGAGCCAGAAGCAGTTAT
TCTAAGTGAAAACAACATGGACTGCAGCTGCACCAACTGCGGGGACTTTGCAACTGGGTT
CTCCAGGAGGATAGAGTACTTATGGAAGTTTCTGGATTCGACAAGTGCAGCATTCAAGGG
CCGAGAAAGTGAAGAGAGAAGGGTGATGGAAGGAGAAGCTGCCAGGGCATTGACAAACCC
AGGAGAGATGAATGAGGGAAAAGAGAAATGGTGTGAGAGAATGCGGGGGGTCGGGTTTGC
AGGAGAGGTATTTGGGGAGGACGCCATTGATGGAGCTCGGGCGTTGTTGAAGAAGTACGA
CAGCAACTGGGAAATGAGAGTAGAAGAGAAAGATGGGTGTGTGGGGTTGTGGTGGAAAGG
GCTACCTGTTTCCTTTTGTTCACTCTGGAGGCTGGAGGATACCAAACCAAATAACAGTTA
G