Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g01090.t01
CDS Infomation

cds chromosome:12X:9:829416:831978:1 gene:VIT_09s0002g01090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTCCGGAACTTGGGCTTCCTACGTTGCAGCATGGCTAGCAACTGTGGCTCTTATC
CTCCTCTCGACCCACCTCCGGCGTCGCCGCAAACTCAACCTCCCGCCAGGCCCAAAGCCC
TGGCCGATCATCGGAAACCTGAACCTCATCGGCGCACTCCCCCATCGCTCCATCCACGAG
CTATCCCAAAAGTACGGCCCCATCATGCAGCTCCGCTTCGGCTCCTTCCCCGTCGTCGTC
GGCTCCTCCGTCGCCATGGCCAAGCTCTTCCTCAAAACCCACGACGTCACCTTCGCCTCC
CGCCCCAAAACCGCCGCCGGAAAATACACCACCTACAACTACTCCGACATCACCTGGTCC
CCCTACGGCCCTTACTGGCGCCAAGCCCGCAAGATGTGCCTGATGGAGCTCTTCAGCGCC
AGACGCCTCGAATCCTACGAATACATTCGGGTCGAAGAAACCAAATCTCTCCTCAGTTCC
CTCTACAAGCAATCCAATTCGCCGGTGGATCTCAAAGATCATCTCTCCACGGTTAGTCTC
AACGTGATCAGTCGAATGGTTCTAGGAAAAAAGTATCTCGACGAGAACGTGGAGGGCTCG
ATCGTGACCCCGGAGGAATTCAAGAAGATGCTCGACGAATTGTTTCTGCTGAGCGGGGTT
TTGAACATCGGAGACTCCATTCCTTGGATCGATTTCTTGGATTTGCAGGGGTATGTGAAG
AGGATGAAGGTTCTGAGCAAGAAATTTGATCGGTTTTTGGAGCATGTTCTAGATGAGCAC
AACGCGAGGAGGAAAGGTGTCGAGAACTACGTGGCTAAGGACATGGTTGATGTGCTGTTG
CAGTTCGCCGACGACCCCACTTTAGAGGTTAAGCTCGAAAGACACGGCGTTAAGGCCTTC
ACCCAGGACCTGATAGCCGGTGGCACGGAGAGCTCGGCGGTGACAGTGGAGTGGGCGATC
TCGGAGCTCCTGAGAAAGCCGGAGCTCTTCGACAAGGCAACCGAAGAGCTCGACAGGGTA
ATTGGAAAGGAGAGGTGGGTGGAGGAGAAAGACATCCCAAATCTACCATACCTAGACACA
ATCGTCAAAGAGACCATGCGTATGCACCCGGTGGCACCAATGCTGGTGCCCAGGTTCTCC
AGAGAGGATATAAAAATCGCCGACTACGATATTCCCAAAGACACCAGAGTCCTCGTAAAC
GTATGGACCATCGGGAGAGACCCCGAGATATGGGACCAACCCAATGAGTTCATCCCGGAG
AGATTCATCGGGAAAAACATCGACGTGAAAGGCCAAGATTTCGAGCTTCTGCCGTTCGGT
ACAGGTCGGAGAATGTGCCCAGGGTACAGTCTCGGCCTCAAGGTGATTCAGTCGAGCTTG
GCCAACCTTCTTCATGGATTCAAGTGGAAGCTGCCGGGCGATATGAAGCCCGGGGACTTG
AGCATGGAGGAAATTTTCGGCCTCTCGACGCCTAAGAAGATCCCGCTCGTGGCGATGGCG
GAGCCTCGCCTGCCGGCCCACCTTTACGACATGTGA

Peptide Sequence

PEP ID

VIT_09s0002g01090.t01
PEP Infomation

pep chromosome:12X:9:829416:831978:1 gene:VIT_09s0002g01090 transcript:VIT_09s0002g01090.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MESGTWASYVAAWLATVALILLSTHLRRRRKLNLPPGPKPWPIIGNLNLIGALPHRSIHE
LSQKYGPIMQLRFGSFPVVVGSSVAMAKLFLKTHDVTFASRPKTAAGKYTTYNYSDITWS
PYGPYWRQARKMCLMELFSARRLESYEYIRVEETKSLLSSLYKQSNSPVDLKDHLSTVSL
NVISRMVLGKKYLDENVEGSIVTPEEFKKMLDELFLLSGVLNIGDSIPWIDFLDLQGYVK
RMKVLSKKFDRFLEHVLDEHNARRKGVENYVAKDMVDVLLQFADDPTLEVKLERHGVKAF
TQDLIAGGTESSAVTVEWAISELLRKPELFDKATEELDRVIGKERWVEEKDIPNLPYLDT
IVKETMRMHPVAPMLVPRFSREDIKIADYDIPKDTRVLVNVWTIGRDPEIWDQPNEFIPE
RFIGKNIDVKGQDFELLPFGTGRRMCPGYSLGLKVIQSSLANLLHGFKWKLPGDMKPGDL
SMEEIFGLSTPKKIPLVAMAEPRLPAHLYDM

Transcript Sequence

Transcript ID

VIT_09s0002g01090.t01
Transcript Infomation

cdna chromosome:12X:9:829416:831978:1 gene:VIT_09s0002g01090 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACCTCACCAACGCCGGAAATGGAGTCCGGAACTTGGGCTTCCTACGTTGCAGCATGGCT
AGCAACTGTGGCTCTTATCCTCCTCTCGACCCACCTCCGGCGTCGCCGCAAACTCAACCT
CCCGCCAGGCCCAAAGCCCTGGCCGATCATCGGAAACCTGAACCTCATCGGCGCACTCCC
CCATCGCTCCATCCACGAGCTATCCCAAAAGTACGGCCCCATCATGCAGCTCCGCTTCGG
CTCCTTCCCCGTCGTCGTCGGCTCCTCCGTCGCCATGGCCAAGCTCTTCCTCAAAACCCA
CGACGTCACCTTCGCCTCCCGCCCCAAAACCGCCGCCGGAAAATACACCACCTACAACTA
CTCCGACATCACCTGGTCCCCCTACGGCCCTTACTGGCGCCAAGCCCGCAAGATGTGCCT
GATGGAGCTCTTCAGCGCCAGACGCCTCGAATCCTACGAATACATTCGGGTCGAAGAAAC
CAAATCTCTCCTCAGTTCCCTCTACAAGCAATCCAATTCGCCGGTGGATCTCAAAGATCA
TCTCTCCACGGTTAGTCTCAACGTGATCAGTCGAATGGTTCTAGGAAAAAAGTATCTCGA
CGAGAACGTGGAGGGCTCGATCGTGACCCCGGAGGAATTCAAGAAGATGCTCGACGAATT
GTTTCTGCTGAGCGGGGTTTTGAACATCGGAGACTCCATTCCTTGGATCGATTTCTTGGA
TTTGCAGGGGTATGTGAAGAGGATGAAGGTTCTGAGCAAGAAATTTGATCGGTTTTTGGA
GCATGTTCTAGATGAGCACAACGCGAGGAGGAAAGGTGTCGAGAACTACGTGGCTAAGGA
CATGGTTGATGTGCTGTTGCAGTTCGCCGACGACCCCACTTTAGAGGTTAAGCTCGAAAG
ACACGGCGTTAAGGCCTTCACCCAGGACCTGATAGCCGGTGGCACGGAGAGCTCGGCGGT
GACAGTGGAGTGGGCGATCTCGGAGCTCCTGAGAAAGCCGGAGCTCTTCGACAAGGCAAC
CGAAGAGCTCGACAGGGTAATTGGAAAGGAGAGGTGGGTGGAGGAGAAAGACATCCCAAA
TCTACCATACCTAGACACAATCGTCAAAGAGACCATGCGTATGCACCCGGTGGCACCAAT
GCTGGTGCCCAGGTTCTCCAGAGAGGATATAAAAATCGCCGACTACGATATTCCCAAAGA
CACCAGAGTCCTCGTAAACGTATGGACCATCGGGAGAGACCCCGAGATATGGGACCAACC
CAATGAGTTCATCCCGGAGAGATTCATCGGGAAAAACATCGACGTGAAAGGCCAAGATTT
CGAGCTTCTGCCGTTCGGTACAGGTCGGAGAATGTGCCCAGGGTACAGTCTCGGCCTCAA
GGTGATTCAGTCGAGCTTGGCCAACCTTCTTCATGGATTCAAGTGGAAGCTGCCGGGCGA
TATGAAGCCCGGGGACTTGAGCATGGAGGAAATTTTCGGCCTCTCGACGCCTAAGAAGAT
CCCGCTCGTGGCGATGGCGGAGCCTCGCCTGCCGGCCCACCTTTACGACATGTGAGTGTG
GCTTGCTCGCTGTTTGTCA