Plant GARDEN
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g01080.t01
CDS Infomation

cds chromosome:12X:9:812030:816741:1 gene:VIT_09s0002g01080 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:D7TZR1]
Sequence

ATGGCAGTGGTTAAAGAAATCATGGGTTGTTCTATGGTGGATGGGTCTTCTTTTGTTTCT
TCTTCAAAAGTGCTTTTAAATCATGGCTTTCAGCAGAGGAATCAGCTTCTGGGGAGGCCA
CTTTGGGTGCCTCTGGAGAAGAGGGGGTTGCATTTGAGGAGGGTTGTGAGGCAGCCTGTT
GCGGCTGTGAGTGAGGATTTGATGAAAGCTTCTGCAGTGCCAGCTGAGAAGGCTGTCAAG
TTCAAGGTGAGAGCTGTTTTGACTGTGAAGAAGAAGAACAAAGAGGATTTGAAGGAGACT
CTTGTGAAGCATTTGGATTCTTTGACTGATAAGATTGGGAGGAATGTTGTTCTTGAGCTT
ATCAGCACAGAGATTGATCCTAAAACCAGGGCTCCAAGGAAGAGCACCCCAGCAGTGGTA
AAAGACTGGTCCAAGAAAACAAACATCAAAGCCGAGAGGGTGAACTACACTGCAGAATTC
ACAGTGGACTCCAATTTTGGAGACCCTGGGGCAATCACAGTGACCAACAAACACCAGAAA
GAGTTCTTCTTGGAGAGCATCACCATTGAAGGGTTTGCCTGTGGTCCAGTCCACTTCCCC
TGCAACTCATGGGTTCAATCCAAAAAGGATCATCCTGGAAAAAGGTTGTTCTTCTCCAAC
AAGCCATATCTGCCTGGTGAGACACCTGCAGGGCTGAGAGCATTGAGAGAAAAAGAGTTG
AGAGACTTGAGGGGTGATGGCAAAGGAGTTCGGAAATCATCCGATCGGATATATGACTAT
GATGTGTATAATGATTTGGGAAACCCTGATAATGGAATCAATTCCGCTCGGCCAATGCTT
GGAGGCGAAAAAATCCCATTTCCCAGACGGTGTCGCACTGGACGGCCTCCATCCAAGACC
GACATGCATGCAGAGAGTCGAGTTGAGCTGCCATTTCCAATGTATGTGCCTAGGGATGAA
CAATTTGAGGAGGTGAAGCAAGACACATTCTCTGATATGAGGGCTAAGGCAGTGTTACAT
AACTTAATACCGGGATTAAAGGCTAGCATGTTGGCCGATAAACAAGATTTTAAGTTGTTT
ACTGATATCGATTGCCTCTACAAAGACGACTCTAAAGTAGGGTTACATGATGAACAATTG
AAGAAGCTCCCATTGCCTCCTAAGGTCATTGATACCATCCAAGAGTCAAGACAAGGCATT
TTCCGATACAACACTCCCAAGATTCTTACTAAGGACAAATTCGCTTGGTTAAGAGATGAT
GAATTCGCCCGCCAAGCAATAGCAGGCATAAATCCAGTTAACATTGAGAAGCTTAAGGTG
TTCCCTCCGGTGAGCAACCTTGATCCTGAGGTCCACGGTCCACAAGAGTCTGCACTCAAA
GAAGAACACATCGTGGGCCATCTTAACGGCATGACTATAGAACAGGCCTTGGAAGAAAAC
AAACTATTCATAGTGGATTTTCATGACATTTACCTTCCATTCCTTGATCGTATCAATTCC
CTTGATGGTAGAAAGGCGTATGCAACTCGTACCATCTTTTTCTTGACTCCTGTTGGAACC
TTAAAGCCCATCGCAATCGAGCTTAGCCTTCCACCATCGGCGCCTATTACTCGAGCAAAG
CGGGTCATCACACCTCCGGTCGATGCAACAAGTGATTGGACTTGGAAGCTCGCAAAAGCT
CATGTCTGCTCCAACGATGCAGGAGTTCATCAACTCGTTAATCATTGGTTGCGCACACAT
GCATGCATGGAACCATTCATACTGGCCGCACATAGGCAACTAAGTGCGATGCACCCTATA
TTTAAGCTTCTAGATCCGCATATGCGATATACTCTAGAGATCAATGGCATGGCACGTCAG
ACTTTGATCAACGCCGATGGAGTGATAGAGTCATGCTTCACTCCAGGCCGATATTGCATG
GAAATAAGTGCCTCTGCATATAAAAATTTTTGGCGCTTCGACTTAGAGGGTCTCCCAGCT
GATCTTATTCGCAGGGGGATGGCAGTTCCCGACCCAGCACAACCTCATGGGCTGAAGCTT
TTGATAGAAGACTACCCATATGCCAACGATGGGCTTCTAATCTGGCGCGCTATTGAGAAC
TGGGTCAAAACCTACGTGGCCCACTACTACCCAAGCCCAAGCGTCGTCATATCCGACCGG
GAGCTTCAAGCCTGGTACTCCGAGGCCGTCAACGTTGGCCATGCTGATCTCCGCCACGCC
GCCTGGTGGCCCTCCCTCTCCACCCCAGACGACCTCGCTTCAATCCTTACCACCCTCATC
TGGCTCGCCTCCGCCCAACACGCTGCCCTAAACTTCGGCCAATATCCCTACGGCGGCTAC
GTCCCCAACCGCCCTCCGCTCATGCGCCGCCTCATCCCGGAACCAACGGACCCCGAATAC
ACCAACTTCCTCAACGACCCACAACGCTACTACCTCTCCGCGCTGCCCGGCGTCCTCCAA
TCCACCAGCTTCATGGCGGTGGTCGACACTCTTTCCACCCACTCGCCTGATGAAGAGTAC
ATCGGCGAGCGGAACCACCCCTCGACGTGGTCCGGCGACGCCGAGATCATCGAGGCGTCT
TATGAGTTCTCGGCGGAAATAAGGAGGATAGAGAAGGAGATCGAGAAGAGAAACGCCGAA
TTTAGCCGAAGAAACAGGTGCGGTGCAGGAGTTTTGCCATATGAACTACTGGCGCCGAGC
TCGGGGCCGGGAGTAACGTGTAGAGGGATTCCAAACACACTTTTTTCATTTTGCTTTTGT
TTTTGTTTCTTTTTTCTAATTTAA

Peptide Sequence

PEP ID

VIT_09s0002g01080.t01
PEP Infomation

pep chromosome:12X:9:812030:816741:1 gene:VIT_09s0002g01080 transcript:VIT_09s0002g01080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:D7TZR1]
Sequence

MAVVKEIMGCSMVDGSSFVSSSKVLLNHGFQQRNQLLGRPLWVPLEKRGLHLRRVVRQPV
AAVSEDLMKASAVPAEKAVKFKVRAVLTVKKKNKEDLKETLVKHLDSLTDKIGRNVVLEL
ISTEIDPKTRAPRKSTPAVVKDWSKKTNIKAERVNYTAEFTVDSNFGDPGAITVTNKHQK
EFFLESITIEGFACGPVHFPCNSWVQSKKDHPGKRLFFSNKPYLPGETPAGLRALREKEL
RDLRGDGKGVRKSSDRIYDYDVYNDLGNPDNGINSARPMLGGEKIPFPRRCRTGRPPSKT
DMHAESRVELPFPMYVPRDEQFEEVKQDTFSDMRAKAVLHNLIPGLKASMLADKQDFKLF
TDIDCLYKDDSKVGLHDEQLKKLPLPPKVIDTIQESRQGIFRYNTPKILTKDKFAWLRDD
EFARQAIAGINPVNIEKLKVFPPVSNLDPEVHGPQESALKEEHIVGHLNGMTIEQALEEN
KLFIVDFHDIYLPFLDRINSLDGRKAYATRTIFFLTPVGTLKPIAIELSLPPSAPITRAK
RVITPPVDATSDWTWKLAKAHVCSNDAGVHQLVNHWLRTHACMEPFILAAHRQLSAMHPI
FKLLDPHMRYTLEINGMARQTLINADGVIESCFTPGRYCMEISASAYKNFWRFDLEGLPA
DLIRRGMAVPDPAQPHGLKLLIEDYPYANDGLLIWRAIENWVKTYVAHYYPSPSVVISDR
ELQAWYSEAVNVGHADLRHAAWWPSLSTPDDLASILTTLIWLASAQHAALNFGQYPYGGY
VPNRPPLMRRLIPEPTDPEYTNFLNDPQRYYLSALPGVLQSTSFMAVVDTLSTHSPDEEY
IGERNHPSTWSGDAEIIEASYEFSAEIRRIEKEIEKRNAEFSRRNRCGAGVLPYELLAPS
SGPGVTCRGIPNTLFSFCFCFCFFFLI

Transcript Sequence

Transcript ID

VIT_09s0002g01080.t01
Transcript Infomation

cdna chromosome:12X:9:812030:816741:1 gene:VIT_09s0002g01080 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:D7TZR1]
Sequence

AGATGGCAGTGGTTAAAGAAATCATGGGTTGTTCTATGGTGGATGGGTCTTCTTTTGTTT
CTTCTTCAAAAGTGCTTTTAAATCATGGCTTTCAGCAGAGGAATCAGCTTCTGGGGAGGC
CACTTTGGGTGCCTCTGGAGAAGAGGGGGTTGCATTTGAGGAGGGTTGTGAGGCAGCCTG
TTGCGGCTGTGAGTGAGGATTTGATGAAAGCTTCTGCAGTGCCAGCTGAGAAGGCTGTCA
AGTTCAAGGTGAGAGCTGTTTTGACTGTGAAGAAGAAGAACAAAGAGGATTTGAAGGAGA
CTCTTGTGAAGCATTTGGATTCTTTGACTGATAAGATTGGGAGGAATGTTGTTCTTGAGC
TTATCAGCACAGAGATTGATCCTAAAACCAGGGCTCCAAGGAAGAGCACCCCAGCAGTGG
TAAAAGACTGGTCCAAGAAAACAAACATCAAAGCCGAGAGGGTGAACTACACTGCAGAAT
TCACAGTGGACTCCAATTTTGGAGACCCTGGGGCAATCACAGTGACCAACAAACACCAGA
AAGAGTTCTTCTTGGAGAGCATCACCATTGAAGGGTTTGCCTGTGGTCCAGTCCACTTCC
CCTGCAACTCATGGGTTCAATCCAAAAAGGATCATCCTGGAAAAAGGTTGTTCTTCTCCA
ACAAGCCATATCTGCCTGGTGAGACACCTGCAGGGCTGAGAGCATTGAGAGAAAAAGAGT
TGAGAGACTTGAGGGGTGATGGCAAAGGAGTTCGGAAATCATCCGATCGGATATATGACT
ATGATGTGTATAATGATTTGGGAAACCCTGATAATGGAATCAATTCCGCTCGGCCAATGC
TTGGAGGCGAAAAAATCCCATTTCCCAGACGGTGTCGCACTGGACGGCCTCCATCCAAGA
CCGACATGCATGCAGAGAGTCGAGTTGAGCTGCCATTTCCAATGTATGTGCCTAGGGATG
AACAATTTGAGGAGGTGAAGCAAGACACATTCTCTGATATGAGGGCTAAGGCAGTGTTAC
ATAACTTAATACCGGGATTAAAGGCTAGCATGTTGGCCGATAAACAAGATTTTAAGTTGT
TTACTGATATCGATTGCCTCTACAAAGACGACTCTAAAGTAGGGTTACATGATGAACAAT
TGAAGAAGCTCCCATTGCCTCCTAAGGTCATTGATACCATCCAAGAGTCAAGACAAGGCA
TTTTCCGATACAACACTCCCAAGATTCTTACTAAGGACAAATTCGCTTGGTTAAGAGATG
ATGAATTCGCCCGCCAAGCAATAGCAGGCATAAATCCAGTTAACATTGAGAAGCTTAAGG
TGTTCCCTCCGGTGAGCAACCTTGATCCTGAGGTCCACGGTCCACAAGAGTCTGCACTCA
AAGAAGAACACATCGTGGGCCATCTTAACGGCATGACTATAGAACAGGCCTTGGAAGAAA
ACAAACTATTCATAGTGGATTTTCATGACATTTACCTTCCATTCCTTGATCGTATCAATT
CCCTTGATGGTAGAAAGGCGTATGCAACTCGTACCATCTTTTTCTTGACTCCTGTTGGAA
CCTTAAAGCCCATCGCAATCGAGCTTAGCCTTCCACCATCGGCGCCTATTACTCGAGCAA
AGCGGGTCATCACACCTCCGGTCGATGCAACAAGTGATTGGACTTGGAAGCTCGCAAAAG
CTCATGTCTGCTCCAACGATGCAGGAGTTCATCAACTCGTTAATCATTGGTTGCGCACAC
ATGCATGCATGGAACCATTCATACTGGCCGCACATAGGCAACTAAGTGCGATGCACCCTA
TATTTAAGCTTCTAGATCCGCATATGCGATATACTCTAGAGATCAATGGCATGGCACGTC
AGACTTTGATCAACGCCGATGGAGTGATAGAGTCATGCTTCACTCCAGGCCGATATTGCA
TGGAAATAAGTGCCTCTGCATATAAAAATTTTTGGCGCTTCGACTTAGAGGGTCTCCCAG
CTGATCTTATTCGCAGGGGGATGGCAGTTCCCGACCCAGCACAACCTCATGGGCTGAAGC
TTTTGATAGAAGACTACCCATATGCCAACGATGGGCTTCTAATCTGGCGCGCTATTGAGA
ACTGGGTCAAAACCTACGTGGCCCACTACTACCCAAGCCCAAGCGTCGTCATATCCGACC
GGGAGCTTCAAGCCTGGTACTCCGAGGCCGTCAACGTTGGCCATGCTGATCTCCGCCACG
CCGCCTGGTGGCCCTCCCTCTCCACCCCAGACGACCTCGCTTCAATCCTTACCACCCTCA
TCTGGCTCGCCTCCGCCCAACACGCTGCCCTAAACTTCGGCCAATATCCCTACGGCGGCT
ACGTCCCCAACCGCCCTCCGCTCATGCGCCGCCTCATCCCGGAACCAACGGACCCCGAAT
ACACCAACTTCCTCAACGACCCACAACGCTACTACCTCTCCGCGCTGCCCGGCGTCCTCC
AATCCACCAGCTTCATGGCGGTGGTCGACACTCTTTCCACCCACTCGCCTGATGAAGAGT
ACATCGGCGAGCGGAACCACCCCTCGACGTGGTCCGGCGACGCCGAGATCATCGAGGCGT
CTTATGAGTTCTCGGCGGAAATAAGGAGGATAGAGAAGGAGATCGAGAAGAGAAACGCCG
AATTTAGCCGAAGAAACAGGTGCGGTGCAGGAGTTTTGCCATATGAACTACTGGCGCCGA
GCTCGGGGCCGGGAGTAACGTGTAGAGGGATTCCAAACACACTTTTTTCATTTTGCTTTT
GTTTTTGTTTCTTTTTTCTAATTTAA