Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g00960.t01
CDS Infomation

cds chromosome:12X:9:698317:707867:-1 gene:VIT_09s0002g00960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGAGGACTTCTCTACTGCAGTGGAATACGGGCTCAGGCTCTCGAAACGAATTTAC
TACGGGAAGGATCGGTCGGCATCGGCTCCGAAGCCGCAGGAAATGGAGAAGTCGGAGTCG
CAGGAGTCGTTCCTTCCAACGGCGCCAATGGTTTACGCCGTGATTCCGGAGCCGTCGATC
GTTGATAATCCGGATGTTCCGAGCTACCAGCCGTATGTGCATGGCCGGTGCGATCCTCCG
GCGCTGATTCCGCTTCACATGCTTGGGATTGCAATGGAAGTTGATTGTTATTTGGATACT
GCGTTCATTTCTGTCAGTGGAACTTGGCGAGTTCACTGCGTTATGGGGAGTAGAAGATGC
GATTGTCGCGTTGCGATTCCAATGGGGGAGCAGGGTTCAGTTCTAGGTGTTGAGGTTGAT
GTTACTGGAAGATCATGTAATAGTCGACTGATCACAGAGGAAGATACAAAAGATAATGGG
AAACCTGCCAAAACAGAAGATGGGCGCTTTCTGAGATGGCGGATATATACCTTAAAAGTT
CCAAAGGTTGAAGGAGGCACCAATTTATCGATTAAGTTCAGTTGGTCTCAGAAATTGCTA
TATCAGGATGGTCAATTCAGTCTCATTATACCTTTCAGTTTTCCCACATGTGTCACTCCT
GCTGGGAAGAAAATTCCCAAAAAAGAAAAGATACGGTTGAATGTGAACTCTGGCACTGGA
ACAGAAATTTTATGCAAGGCTACAAGCCATCTTCTGAAGGAGCTAAGGCATCAGGTCGGT
AAATTGGGTTTCTTATACGAAGCAGAAGTTCAAACATGGTCACGTGCTGACTTCAATTTT
TCATATACTGTGTCTTCTAATAACATATTTGGTGGGGCGCTCATGCAATCTCCTTCTGTA
CATGATTTTGATCAAAGAGAAATGTTCTGCTTCTATCTTTTCCCTGGAAGTAACATCAGT
GGGAAGGTTTTCAGAAAGGAAGTGGTATTTATTGTTGACATAAGCAGAAGCATGCGGGGA
CGCCCACTTGAGAATACAAAGGATGCTGTACTGGCAGCCCTCTTGAACCTTAATACACAG
GATTCTTTTAACATAATAGCTTTTAATGGAGACACTTGCTTATTCTCATCAACAATGGTT
CTTGCAACCAAGGAAGAAGTTGGAAATGCTACTCAGTGGATTAACACAAATTTCAATGCA
GAGGGTGGAACAAACATTTTGAATCCTCTAAGTCAGGCAATAGAGATGCTCACTAAAACT
AGTGGTTCAATGCCTCTCATTTTCCTCATTACTGATGGGGCTGTTGAAGATGAAAGACAT
ATTTGTAATGTTGTGGAAGGCCATCTCAGAAACAGAAGCCCAATTTGTCCTCGTATCTGT
ACTTTTGGCATAGGTTCATACTGTAATCATTACTTCTTGCAAATGCTAGCACAGATTGGA
AGGGGTTACTATGATGCTGCATATGATGCTGATTCAATTGCCTTTCACATGCAAAGACTG
TTCACAAAAGCTTCATCTGTCATTCTTGCAAATATAACTATTGAAACCTTGGAACATCTT
GATTCACTTGAGCTGTTCCCATTTCATATTCCAGACCTTTCATCTGGAAGCCCACTGATT
ATATCAGGCAGATACCATGGAGAATTTCCTGATTCTCTCAAAGCTAGTGGTAGTTTGGCA
GATATGAGCAATTTCACGATAGACTTGAAAATACAGAAGGCCAAGGAGATTCCGCTTGAC
AGAGTATTTGCAAGGAGACAAATTAATTTACTCACAGTACAAGCATGGTTGTCAGAAAGT
AAACAGCTAGAGGAGAGAATCGCAAGAATGAGCATGCAGACGGGCTTTCCTTCAGAGTAT
ACCTGCATGATTTTACTTGTGACTGATAAAGGGAAGCAAGCCTCTGAATCAGTGATGCTA
CAAGAGAAGATGGTGGACTCAATCGGACAGAAAATCATACTCCTAGGAACCCTGGGCATC
GGCTTTGGTGACTTGACAGCAACATCTGAGAATCTGCCTTCAGGAGTCGAAGAGCCAAAG
CCACCTGAGGGCACAGATGTGATCTTTAAGGCTGCTACCAACTGTTGCGCCATGGTGGCT
GATCGCATATGTTGCATGTGCTTCATCCAGGCTTGTTCAAAACTGAATAACCAATGCGCA
ATAGCCTTCACACAGCTCTGTTCTGCCCTCACGTGTTTCGGGTGCATGGATTGTTGCTGT
GAACTCTGTGTTTCGTGCGGCTAA

Peptide Sequence

PEP ID

VIT_09s0002g00960.t01
PEP Infomation

pep chromosome:12X:9:698317:707867:-1 gene:VIT_09s0002g00960 transcript:VIT_09s0002g00960.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEDFSTAVEYGLRLSKRIYYGKDRSASAPKPQEMEKSESQESFLPTAPMVYAVIPEPSI
VDNPDVPSYQPYVHGRCDPPALIPLHMLGIAMEVDCYLDTAFISVSGTWRVHCVMGSRRC
DCRVAIPMGEQGSVLGVEVDVTGRSCNSRLITEEDTKDNGKPAKTEDGRFLRWRIYTLKV
PKVEGGTNLSIKFSWSQKLLYQDGQFSLIIPFSFPTCVTPAGKKIPKKEKIRLNVNSGTG
TEILCKATSHLLKELRHQVGKLGFLYEAEVQTWSRADFNFSYTVSSNNIFGGALMQSPSV
HDFDQREMFCFYLFPGSNISGKVFRKEVVFIVDISRSMRGRPLENTKDAVLAALLNLNTQ
DSFNIIAFNGDTCLFSSTMVLATKEEVGNATQWINTNFNAEGGTNILNPLSQAIEMLTKT
SGSMPLIFLITDGAVEDERHICNVVEGHLRNRSPICPRICTFGIGSYCNHYFLQMLAQIG
RGYYDAAYDADSIAFHMQRLFTKASSVILANITIETLEHLDSLELFPFHIPDLSSGSPLI
ISGRYHGEFPDSLKASGSLADMSNFTIDLKIQKAKEIPLDRVFARRQINLLTVQAWLSES
KQLEERIARMSMQTGFPSEYTCMILLVTDKGKQASESVMLQEKMVDSIGQKIILLGTLGI
GFGDLTATSENLPSGVEEPKPPEGTDVIFKAATNCCAMVADRICCMCFIQACSKLNNQCA
IAFTQLCSALTCFGCMDCCCELCVSCG

Transcript Sequence

Transcript ID

VIT_09s0002g00960.t01
Transcript Infomation

cdna chromosome:12X:9:698317:707867:-1 gene:VIT_09s0002g00960 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGCATCGGTACTGTGAAAACAACTGTCGTTTCAATAGCTTCACTCACTCTAACGCTTCAA
GCTTGTGTTCTCTTTCAACATCAAACCCTAGGGCTCAGCCTTATCGTGTACGGGGGATCA
CACACAACCGCCGGAGAATCTAGCCGGCGAGGAAGGTTCGACGGAATGGCAGAGGACTTC
TCTACTGCAGTGGAATACGGGCTCAGGCTCTCGAAACGAATTTACTACGGGAAGGATCGG
TCGGCATCGGCTCCGAAGCCGCAGGAAATGGAGAAGTCGGAGTCGCAGGAGTCGTTCCTT
CCAACGGCGCCAATGGTTTACGCCGTGATTCCGGAGCCGTCGATCGTTGATAATCCGGAT
GTTCCGAGCTACCAGCCGTATGTGCATGGCCGGTGCGATCCTCCGGCGCTGATTCCGCTT
CACATGCTTGGGATTGCAATGGAAGTTGATTGTTATTTGGATACTGCGTTCATTTCTGTC
AGTGGAACTTGGCGAGTTCACTGCGTTATGGGGAGTAGAAGATGCGATTGTCGCGTTGCG
ATTCCAATGGGGGAGCAGGGTTCAGTTCTAGGTGTTGAGGTTGATGTTACTGGAAGATCA
TGTAATAGTCGACTGATCACAGAGGAAGATACAAAAGATAATGGGAAACCTGCCAAAACA
GAAGATGGGCGCTTTCTGAGATGGCGGATATATACCTTAAAAGTTCCAAAGGTTGAAGGA
GGCACCAATTTATCGATTAAGTTCAGTTGGTCTCAGAAATTGCTATATCAGGATGGTCAA
TTCAGTCTCATTATACCTTTCAGTTTTCCCACATGTGTCACTCCTGCTGGGAAGAAAATT
CCCAAAAAAGAAAAGATACGGTTGAATGTGAACTCTGGCACTGGAACAGAAATTTTATGC
AAGGCTACAAGCCATCTTCTGAAGGAGCTAAGGCATCAGGTCGGTAAATTGGGTTTCTTA
TACGAAGCAGAAGTTCAAACATGGTCACGTGCTGACTTCAATTTTTCATATACTGTGTCT
TCTAATAACATATTTGGTGGGGCGCTCATGCAATCTCCTTCTGTACATGATTTTGATCAA
AGAGAAATGTTCTGCTTCTATCTTTTCCCTGGAAGTAACATCAGTGGGAAGGTTTTCAGA
AAGGAAGTGGTATTTATTGTTGACATAAGCAGAAGCATGCGGGGACGCCCACTTGAGAAT
ACAAAGGATGCTGTACTGGCAGCCCTCTTGAACCTTAATACACAGGATTCTTTTAACATA
ATAGCTTTTAATGGAGACACTTGCTTATTCTCATCAACAATGGTTCTTGCAACCAAGGAA
GAAGTTGGAAATGCTACTCAGTGGATTAACACAAATTTCAATGCAGAGGGTGGAACAAAC
ATTTTGAATCCTCTAAGTCAGGCAATAGAGATGCTCACTAAAACTAGTGGTTCAATGCCT
CTCATTTTCCTCATTACTGATGGGGCTGTTGAAGATGAAAGACATATTTGTAATGTTGTG
GAAGGCCATCTCAGAAACAGAAGCCCAATTTGTCCTCGTATCTGTACTTTTGGCATAGGT
TCATACTGTAATCATTACTTCTTGCAAATGCTAGCACAGATTGGAAGGGGTTACTATGAT
GCTGCATATGATGCTGATTCAATTGCCTTTCACATGCAAAGACTGTTCACAAAAGCTTCA
TCTGTCATTCTTGCAAATATAACTATTGAAACCTTGGAACATCTTGATTCACTTGAGCTG
TTCCCATTTCATATTCCAGACCTTTCATCTGGAAGCCCACTGATTATATCAGGCAGATAC
CATGGAGAATTTCCTGATTCTCTCAAAGCTAGTGGTAGTTTGGCAGATATGAGCAATTTC
ACGATAGACTTGAAAATACAGAAGGCCAAGGAGATTCCGCTTGACAGAGTATTTGCAAGG
AGACAAATTAATTTACTCACAGTACAAGCATGGTTGTCAGAAAGTAAACAGCTAGAGGAG
AGAATCGCAAGAATGAGCATGCAGACGGGCTTTCCTTCAGAGTATACCTGCATGATTTTA
CTTGTGACTGATAAAGGGAAGCAAGCCTCTGAATCAGTGATGCTACAAGAGAAGATGGTG
GACTCAATCGGACAGAAAATCATACTCCTAGGAACCCTGGGCATCGGCTTTGGTGACTTG
ACAGCAACATCTGAGAATCTGCCTTCAGGAGTCGAAGAGCCAAAGCCACCTGAGGGCACA
GATGTGATCTTTAAGGCTGCTACCAACTGTTGCGCCATGGTGGCTGATCGCATATGTTGC
ATGTGCTTCATCCAGGCTTGTTCAAAACTGAATAACCAATGCGCAATAGCCTTCACACAG
CTCTGTTCTGCCCTCACGTGTTTCGGGTGCATGGATTGTTGCTGTGAACTCTGTGTTTCG
TGCGGCTAATGACCCAACGATACAGAGTAGGACATCAAAATGTATGTATATACGCTGTTG
CTGCAATATATATATATATATATTATGTTTACA