Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g00610.t01
CDS Infomation

cds chromosome:12X:9:427140:429896:-1 gene:VIT_09s0002g00610 gene_biotype:protein_coding transcript_biotype:protein_coding description:40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:A5BUU4]
Sequence

ATGGCGACTCCCACTAGAGCTCTATCTCAGAAGGAACAGGACATACAGATGATGCTCGCC
GCCGAGGTTCACCTCGGTACCAAGAACTGTAACTTCCAGATGGAACGTTACGTCTTCAAG
CGCCGCAATGATGGGATTTACATCATCAACCTTGGAAAAACATGGGAGAAGCTGCAGCTT
GCAGCCAGGGTGATTGTTGCGATTGAGAACCCTAAGGACATCATTGTTCAGTCTGCTAGG
CCCTATGGGCAGAGGGCAGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCGATTGCT
GGAAGGCACACACCAGGTACATTCACCAATCAGCTCCAGACATCTTTCAGTGAGCCCCGT
CTTCTCATCCTCACAGACCCAAGAACTGATCACCAGCCTATTAAGGAAGCTGCACTAGGA
AACATTCCAACTATTGCTTTCTGTGACACTGATTCCCCAATGCGGTATGTTGACATTGGT
ATCCCAGCCAATAACAAGGGAAAGCACAGCATTGGCTGTCTGTTCTGGCTGTTGGCAAGG
ATGGTTCTGCAGATGCGTCGCACTATTGCTCCCGGACACAAGTGGGATGTGATGGTGGAT
CTGTTTTTCTACAGGGAGCCTGAGGAGCCGAAGGAACAAGAAGGGGATGAAGTGGTTGCT
GCCCCAGATTATGGAATAACAGATTACCAAGCCACAGCACTTGGTGGTCTCGGCGGCGGT
GATTGGGGTGCCCCAATTACTGATGCCCCCCAGTGGGGCGCTGATGTGCCTGCAGTGGCT
CCCATTCCTGCAGTTCCAGGAAGCAATTGGGGGGATGCAGCTCCAATGCCAAGTGCAGTT
CCAATTGCAACAGATGGATGGGATGCTGCAGCTGCACCACCAGTAGCAGTCCCCCCCCCA
GTAGTTGAAGGTGTTCCTCCTCCTGCCGGCTGGGAGTGA

Peptide Sequence

PEP ID

VIT_09s0002g00610.t01
PEP Infomation

pep chromosome:12X:9:427140:429896:-1 gene:VIT_09s0002g00610 transcript:VIT_09s0002g00610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:A5BUU4]
Sequence

MATPTRALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQL
AARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPR
LLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLAR
MVLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLGGG
DWGAPITDAPQWGADVPAVAPIPAVPGSNWGDAAPMPSAVPIATDGWDAAAAPPVAVPPP
VVEGVPPPAGWE

Transcript Sequence

Transcript ID

VIT_09s0002g00610.t01
Transcript Infomation

cdna chromosome:12X:9:427140:429896:-1 gene:VIT_09s0002g00610 gene_biotype:protein_coding transcript_biotype:protein_coding description:40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:A5BUU4]
Sequence

GAAACCCTAGCGCGAGAGCGAATTGGCGAGATAAGAGCAGTCTAGGGTTTTCAGAGAAAG
AGGAAGCAGAAAGCCATGGCGACTCCCACTAGAGCTCTATCTCAGAAGGAACAGGACATA
CAGATGATGCTCGCCGCCGAGGTTCACCTCGGTACCAAGAACTGTAACTTCCAGATGGAA
CGTTACGTCTTCAAGCGCCGCAATGATGGGATTTACATCATCAACCTTGGAAAAACATGG
GAGAAGCTGCAGCTTGCAGCCAGGGTGATTGTTGCGATTGAGAACCCTAAGGACATCATT
GTTCAGTCTGCTAGGCCCTATGGGCAGAGGGCAGTTTTGAAGTTTGCTCAATACACTGGT
GCTCATGCGATTGCTGGAAGGCACACACCAGGTACATTCACCAATCAGCTCCAGACATCT
TTCAGTGAGCCCCGTCTTCTCATCCTCACAGACCCAAGAACTGATCACCAGCCTATTAAG
GAAGCTGCACTAGGAAACATTCCAACTATTGCTTTCTGTGACACTGATTCCCCAATGCGG
TATGTTGACATTGGTATCCCAGCCAATAACAAGGGAAAGCACAGCATTGGCTGTCTGTTC
TGGCTGTTGGCAAGGATGGTTCTGCAGATGCGTCGCACTATTGCTCCCGGACACAAGTGG
GATGTGATGGTGGATCTGTTTTTCTACAGGGAGCCTGAGGAGCCGAAGGAACAAGAAGGG
GATGAAGTGGTTGCTGCCCCAGATTATGGAATAACAGATTACCAAGCCACAGCACTTGGT
GGTCTCGGCGGCGGTGATTGGGGTGCCCCAATTACTGATGCCCCCCAGTGGGGCGCTGAT
GTGCCTGCAGTGGCTCCCATTCCTGCAGTTCCAGGAAGCAATTGGGGGGATGCAGCTCCA
ATGCCAAGTGCAGTTCCAATTGCAACAGATGGATGGGATGCTGCAGCTGCACCACCAGTA
GCAGTCCCCCCCCCAGTAGTTGAAGGTGTTCCTCCTCCTGCCGGCTGGGAGTGATGGATG
AGCCAATCTAAAATCAAGTTTTAAACATTTGTCATTTGCTATTTAAGAAGGGATTTCTTT
TTTGTCAGAGTTTTTAGTTGTAGATGATGGCTAGTTTTATGAGAATTTTTGACATTTCAT
GTTTGGATATTTGAAAGAAACACAGCTGTCTTTCTCTTATGTGAGGGATTTAAAGTTTGA
ATTACTTTTTAGGACGTTTTTTGTTAATCCTGGATCTCAAGAACTGAGATATAAAGGTTT
TCAGCTCTCTACACATGGGAAATAATTTACAAGTGAATCTGGTGAAAGACCAAACA