Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_09s0002g00580.t01
CDS Infomation

cds chromosome:12X:9:402340:404568:1 gene:VIT_09s0002g00580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAAGCTTGAGCTTCCATTTCTGTGTGTTAATGGTGATGTTTGCAGGCCTAATCAGC
CCACCCATCTGCCATGCCCGCTTCCAAGAGCCCAAGAAGCATGTCCCCCTGTTCATCCTG
GGGGATTCACTCTTTGATCCTGGCAACAATCTCTACTTGAACACCACCCCAGAATCCTCG
GCTTTCTGGCCATATGGAGAAACCTTCTTCAAGCGGGCTACTGGGAGATTTTCTGATGGT
CGCCTAGTCCCGGATTTTATCGCTGAGTATATGAATCTGCCAATGATACCTCCCTACTTA
CAGCCCGGTCCGCAGCGATTCATTGATGGGTCCAACTTTGCTTCAGCAGGAGCAGGTGTT
CTACCTGAAACAAATTTTGAAGTGATAAGTCTCCCACAGCAGCTAATGTATTTTAAGGGT
ATGGTCAAGGTCTTGAAGCATCAGCTAGATGATGCGGAAGCCAAGAAGCTGCTTAAGAGA
GCTGTTTACTTGTTTAGCATCGGTGGCAATGACTACTTACACTTCTACGATGAAAACACT
AATGCTTCTCAATCAGAGAAGAGAGAATATGTTGGAATCATTATTGGAAATTTGACAATA
GCCCTCAAAGAAATATATGGACTTGGAGGTAGAAAGATTGCATTTCAGAATGCAGGGCTT
CTGGGTTGTTTACCCTCCTCGAGATCCGGCACCAAAAATGGTGCCTGCGCTGAAAAACCC
TCGGCATTGGCACGACTACACAACATGGCTCTTGCCAAAGCCCTCAAGGAACTAGAGAGC
AGCTTGCCAGGATTCAAATATGCAATTTTCGACTACTACAAAGCCATTAGCCAAAGAACA
GACAACCCTTCGAAATATGGTTTCAAGGAAGCAAAAACTGCATGCTGTGGAAGTGGACCG
TACCGGGCGAGTAACTGTGGAGGAGAAAGAGGAAGAAAAAAGTTTGAGTTGTGTAGGATT
CCTGGTGACTATCTCTGGTTTGATGGTGGACACGGCACTGAAAGGGCCAACCGGCAGTTG
TCCGAGCTACTGTGGGGGGGAGGCCCTAGCAGCACAGCACCTCGCAACCTGAAGCAACTG
GTTGAACTTGAAATTATGTAG

Peptide Sequence

PEP ID

VIT_09s0002g00580.t01
PEP Infomation

pep chromosome:12X:9:402340:404568:1 gene:VIT_09s0002g00580 transcript:VIT_09s0002g00580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASLSFHFCVLMVMFAGLISPPICHARFQEPKKHVPLFILGDSLFDPGNNLYLNTTPESS
AFWPYGETFFKRATGRFSDGRLVPDFIAEYMNLPMIPPYLQPGPQRFIDGSNFASAGAGV
LPETNFEVISLPQQLMYFKGMVKVLKHQLDDAEAKKLLKRAVYLFSIGGNDYLHFYDENT
NASQSEKREYVGIIIGNLTIALKEIYGLGGRKIAFQNAGLLGCLPSSRSGTKNGACAEKP
SALARLHNMALAKALKELESSLPGFKYAIFDYYKAISQRTDNPSKYGFKEAKTACCGSGP
YRASNCGGERGRKKFELCRIPGDYLWFDGGHGTERANRQLSELLWGGGPSSTAPRNLKQL
VELEIM

Transcript Sequence

Transcript ID

VIT_09s0002g00580.t01
Transcript Infomation

cdna chromosome:12X:9:402340:404568:1 gene:VIT_09s0002g00580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGTTGATCAGCCCAGCAACATAGAGAAAAGAGAGTGATCAGAAGATTGGTATCAACTTCG
ATTTCATCATGGCAAGCTTGAGCTTCCATTTCTGTGTGTTAATGGTGATGTTTGCAGGCC
TAATCAGCCCACCCATCTGCCATGCCCGCTTCCAAGAGCCCAAGAAGCATGTCCCCCTGT
TCATCCTGGGGGATTCACTCTTTGATCCTGGCAACAATCTCTACTTGAACACCACCCCAG
AATCCTCGGCTTTCTGGCCATATGGAGAAACCTTCTTCAAGCGGGCTACTGGGAGATTTT
CTGATGGTCGCCTAGTCCCGGATTTTATCGCTGAGTATATGAATCTGCCAATGATACCTC
CCTACTTACAGCCCGGTCCGCAGCGATTCATTGATGGGTCCAACTTTGCTTCAGCAGGAG
CAGGTGTTCTACCTGAAACAAATTTTGAAGTGATAAGTCTCCCACAGCAGCTAATGTATT
TTAAGGGTATGGTCAAGGTCTTGAAGCATCAGCTAGATGATGCGGAAGCCAAGAAGCTGC
TTAAGAGAGCTGTTTACTTGTTTAGCATCGGTGGCAATGACTACTTACACTTCTACGATG
AAAACACTAATGCTTCTCAATCAGAGAAGAGAGAATATGTTGGAATCATTATTGGAAATT
TGACAATAGCCCTCAAAGAAATATATGGACTTGGAGGTAGAAAGATTGCATTTCAGAATG
CAGGGCTTCTGGGTTGTTTACCCTCCTCGAGATCCGGCACCAAAAATGGTGCCTGCGCTG
AAAAACCCTCGGCATTGGCACGACTACACAACATGGCTCTTGCCAAAGCCCTCAAGGAAC
TAGAGAGCAGCTTGCCAGGATTCAAATATGCAATTTTCGACTACTACAAAGCCATTAGCC
AAAGAACAGACAACCCTTCGAAATATGGTTTCAAGGAAGCAAAAACTGCATGCTGTGGAA
GTGGACCGTACCGGGCGAGTAACTGTGGAGGAGAAAGAGGAAGAAAAAAGTTTGAGTTGT
GTAGGATTCCTGGTGACTATCTCTGGTTTGATGGTGGACACGGCACTGAAAGGGCCAACC
GGCAGTTGTCCGAGCTACTGTGGGGGGGAGGCCCTAGCAGCACAGCACCTCGCAACCTGA
AGCAACTGGTTGAACTTGAAATTATGTAGAAGATGATCTCATCATCATATACGCCATAAA
GCTATCCCAACTATTTTTAATCCAGTACTAGTAGGCGTTTCTGATTCATGATGGG