Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0105g00300.t01
CDS Infomation

cds chromosome:12X:8:7406645:7411642:1 gene:VIT_08s0105g00300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:D7SY09]
Sequence

ATGTCGGAGCGAACCAAACCCCCGGCGGACATCAAGGATATATTCGACCGTTACTCCGAC
CACGGAACAATGACCCTCGATCACCTCCTCAGGTTCCTGATAGAAGTTCAGGGCGAAAAA
GCGGCCACCAAGGACGATGCGGAAGCCATTGTCAATGCCCTCATTGCTCTCCAGCATCCC
GACATCTCTCAATCCAAGGCTCTGGATCTCCAAGCCTTTTTCTGGTACCTCTTCGGCGAC
GTCAATCCTCCCCTCTCGCCTTCCGGCTCGCATGACATGAATGCTCCGTTGCCGCATTAT
TTCATCTATACAAGTCACAATTCCTATCTAACCGGGAATCAACTCAGCAGTGACTCCAGC
GATGCCCCCATTATAGAAGCACTGCAGAGAGGTGTAAGAGTAATTGAACTGGATCTGTGG
CCAAATTCCACCGAAGATGATGTGGATGTCCTTCATGGCATGACACTAACAAACCCGGTG
AAACTCATCCAGTGTTTGAGATCTATCAAGGAATATGCTTTTGTTGTGTCTGATTATCCT
GTTGTAATAACTTTAGAAGACCACCTCAAGCCAGATCTTCAGGCTAAAGTGGCCCAGATG
CTCACTCAAACCTTTGGAGATATGCTGTTTGTCCCTGAGTCAGAATGTATAGCAGAATTC
GCTTCACCTGAAGCATTGAAGAGACGGATCCTAATCTCAACCAAACCACCAAAAGAATAT
CTTGAAAAAAAAATTGAAGCATTGGAAGAGAATGACCCAGAGAATGTAGAGTCTATTGAC
AGGGAAGATCTTGAAGATGAGGAAGATGAGGAAGACAAGTTACAACACAATGCTGCACCT
GAATATAGGCGTCTAATTGCCATTCATGCTGGGAAGCTAAAAGGTGGACTGAAAGAGTGG
CTGAGGGTGGATCCTGATAAAGTTAGGCGTCTTAGCTTAAGTGAGCGTGAGCTTGAAAAG
GCATCCATAACTCATGGTAAAGATATTATCAGGTTTACCCAGAAAAATTTCCTGAGAGTA
TATCCAAAAGGTGTACGGGTTGATTCATCAAATTATGATCCGCTAACTGCATGGATGCAT
GGAGCTCAAATGGTGGCATTTAATATGCAGGGATACGGCAAGTCACTTTGGTTGATGCAA
GGAATGTTCAGAGCCAATGGTGGTTGTGGTTATGTGAAGAAACCTGATTTTCTACTGAAG
CTTGGTCCCAACAATGATGTTTTTGATCCTCAAGCAAATTTACCAGTGAAGACAACTTTG
AAAGTTAAAGCATATTTGGGGGAGGGCTGGCATTCAGATTTTGGTAAATTTGATATATAT
TCTCGACCAGACTTCTATCTAAGGGTTGGAATAGCTGGGGTTCCAGAAGATTCAGGAATG
AAGGAAACAAAGGAAATGGATGATAACTGGAACCCTACTTGGAATGAAGAGTTTGAGTTC
CCCTTGACTGTTCCTGAGCTGGCATTGATCCGGATTGAAATATATGACTATGATATGTCT
GAGAGGGATGATTTTGGAGGTCAAACATGTCTTCCTGTTTCAGATTTGAAAACAGGAATC
CGGGCTGTTCCACTTCACAACAAAGAGGGGGATAAGTACAAATCTGTAAAGCTACTCATG
CGCTTCGAATTTGTTTCAGTTGATTCCAGGCCTTGA

Peptide Sequence

PEP ID

VIT_08s0105g00300.t01
PEP Infomation

pep chromosome:12X:8:7406645:7411642:1 gene:VIT_08s0105g00300 transcript:VIT_08s0105g00300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:D7SY09]
Sequence

MSERTKPPADIKDIFDRYSDHGTMTLDHLLRFLIEVQGEKAATKDDAEAIVNALIALQHP
DISQSKALDLQAFFWYLFGDVNPPLSPSGSHDMNAPLPHYFIYTSHNSYLTGNQLSSDSS
DAPIIEALQRGVRVIELDLWPNSTEDDVDVLHGMTLTNPVKLIQCLRSIKEYAFVVSDYP
VVITLEDHLKPDLQAKVAQMLTQTFGDMLFVPESECIAEFASPEALKRRILISTKPPKEY
LEKKIEALEENDPENVESIDREDLEDEEDEEDKLQHNAAPEYRRLIAIHAGKLKGGLKEW
LRVDPDKVRRLSLSERELEKASITHGKDIIRFTQKNFLRVYPKGVRVDSSNYDPLTAWMH
GAQMVAFNMQGYGKSLWLMQGMFRANGGCGYVKKPDFLLKLGPNNDVFDPQANLPVKTTL
KVKAYLGEGWHSDFGKFDIYSRPDFYLRVGIAGVPEDSGMKETKEMDDNWNPTWNEEFEF
PLTVPELALIRIEIYDYDMSERDDFGGQTCLPVSDLKTGIRAVPLHNKEGDKYKSVKLLM
RFEFVSVDSRP

Transcript Sequence

Transcript ID

VIT_08s0105g00300.t01
Transcript Infomation

cdna chromosome:12X:8:7406645:7411642:1 gene:VIT_08s0105g00300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Phosphoinositide phospholipase C [Source:UniProtKB/TrEMBL;Acc:D7SY09]
Sequence

AGCGACAATCCCCCCTTCTCTTCTCATCTCATCTGTCTCTTTCTCTGCAAATCCAAACAT
GTCGGAGCGAACCAAACCCCCGGCGGACATCAAGGATATATTCGACCGTTACTCCGACCA
CGGAACAATGACCCTCGATCACCTCCTCAGGTTCCTGATAGAAGTTCAGGGCGAAAAAGC
GGCCACCAAGGACGATGCGGAAGCCATTGTCAATGCCCTCATTGCTCTCCAGCATCCCGA
CATCTCTCAATCCAAGGCTCTGGATCTCCAAGCCTTTTTCTGGTACCTCTTCGGCGACGT
CAATCCTCCCCTCTCGCCTTCCGGCTCGCATGACATGAATGCTCCGTTGCCGCATTATTT
CATCTATACAAGTCACAATTCCTATCTAACCGGGAATCAACTCAGCAGTGACTCCAGCGA
TGCCCCCATTATAGAAGCACTGCAGAGAGGTGTAAGAGTAATTGAACTGGATCTGTGGCC
AAATTCCACCGAAGATGATGTGGATGTCCTTCATGGCATGACACTAACAAACCCGGTGAA
ACTCATCCAGTGTTTGAGATCTATCAAGGAATATGCTTTTGTTGTGTCTGATTATCCTGT
TGTAATAACTTTAGAAGACCACCTCAAGCCAGATCTTCAGGCTAAAGTGGCCCAGATGCT
CACTCAAACCTTTGGAGATATGCTGTTTGTCCCTGAGTCAGAATGTATAGCAGAATTCGC
TTCACCTGAAGCATTGAAGAGACGGATCCTAATCTCAACCAAACCACCAAAAGAATATCT
TGAAAAAAAAATTGAAGCATTGGAAGAGAATGACCCAGAGAATGTAGAGTCTATTGACAG
GGAAGATCTTGAAGATGAGGAAGATGAGGAAGACAAGTTACAACACAATGCTGCACCTGA
ATATAGGCGTCTAATTGCCATTCATGCTGGGAAGCTAAAAGGTGGACTGAAAGAGTGGCT
GAGGGTGGATCCTGATAAAGTTAGGCGTCTTAGCTTAAGTGAGCGTGAGCTTGAAAAGGC
ATCCATAACTCATGGTAAAGATATTATCAGGTTTACCCAGAAAAATTTCCTGAGAGTATA
TCCAAAAGGTGTACGGGTTGATTCATCAAATTATGATCCGCTAACTGCATGGATGCATGG
AGCTCAAATGGTGGCATTTAATATGCAGGGATACGGCAAGTCACTTTGGTTGATGCAAGG
AATGTTCAGAGCCAATGGTGGTTGTGGTTATGTGAAGAAACCTGATTTTCTACTGAAGCT
TGGTCCCAACAATGATGTTTTTGATCCTCAAGCAAATTTACCAGTGAAGACAACTTTGAA
AGTTAAAGCATATTTGGGGGAGGGCTGGCATTCAGATTTTGGTAAATTTGATATATATTC
TCGACCAGACTTCTATCTAAGGGTTGGAATAGCTGGGGTTCCAGAAGATTCAGGAATGAA
GGAAACAAAGGAAATGGATGATAACTGGAACCCTACTTGGAATGAAGAGTTTGAGTTCCC
CTTGACTGTTCCTGAGCTGGCATTGATCCGGATTGAAATATATGACTATGATATGTCTGA
GAGGGATGATTTTGGAGGTCAAACATGTCTTCCTGTTTCAGATTTGAAAACAGGAATCCG
GGCTGTTCCACTTCACAACAAAGAGGGGGATAAGTACAAATCTGTAAAGCTACTCATGCG
CTTCGAATTTGTTTCAGTTGATTCCAGGCCTTGATCCTAATTGGTCAGAGACTCAGAGCA
TCTCTCTGGTTATCCAGCCTCACAGTAATCTCACCACATTGCAGTACTGAGTTGCTGCCA
TCATATCTCTTGAAAGCAACACTACCGGCATAATTCTGCTATTTCAGTGAAGGGAACCAG
AAAGTTCCTTCACACTATTAGGCGACTAAATGGTTGATCGGATACAACCGGCACCACCTT
GGATTCTTGTGGTTTTAAATTTTCTTTCTGTTATATATTATATCATGCAGTTGTAACTTT
TATCGACCACTTGTTGAGTAGAATGGTTGTACCTAAATATATGACGATAGCCTTCAATTG
TGAGAATT