Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0105g00200.t01
CDS Infomation

cds chromosome:12X:8:7180690:7182105:-1 gene:VIT_08s0105g00200 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6H6S6]
Sequence

ATGGATGATGTTGAAATTCCTGAGTACTTCATCTGTCCCATATCGCTTCAGATCATGAGA
GATCCAGTTACAGCCATAACTGGAATCACATACGATCGAGAGAGCATCGAAAACTGGCTG
TTCAAAGGCAACAACACATGCCCAGTCACCAAACAACCATTACCCCCTGATTCTGACTTG
ACTCCCAATCACACCCTCCGGCGATTGATCCAATCTTGGTGCACTGAGAATGCTTCAAAC
GGCGTGGTTCGGATTCCCACTCCTAAGGCTCCTCTCACCAAGTCTCATGTTGTGAAGCTG
GTGAAGGAGCTTTGGGTTCCTCAGTTGCAGCTCAAAACTCTGAGGAAGTTGGAGTTGCTT
GCTATGGAGAATGAGAGAAACAGGAGGTATATGGTGGAAGCTGGGGTAATTAAAAGCATG
TCGTCATTTCTTGTGGCTTGTTTCAATAAACAGCAGACTGTTGGCCTTGAAGAAGCTCTC
AGCATTCTCTATCTGATTCGGGTTAATCCAACTTCCGAGACAAGGCTACTACCGATTGAA
AATGATAGAATTATGGAAACTTTTACATGGATTTTGCAGTGCAAGATGGATGGTCACAGC
AGTATTAAAGCACATGCGCTGTTGGTGTTGAAGGTAATGGTGAAAACAGCAAGCTCCACC
CAGCTAGAGAGGCTAAAACCTGAGTTCTTGTCGAGTGTTGTAGGGGTGCTTAGGGAAGGG
ATCTCGCACCAGGGCATCAATGCCGCCTTGCACATCTTGCTAGACACGTGTCCGTGGGGA
AGAAACCGAATGAGTATGATTGAATCCGGGGCAATTCATGACGTCATAGAGATTGAATTA
GGAATGCCGGAGAGGAGGACGACGGAGCTGATTCTAGGGATATTGTTTCATCTATGCTCC
TGCGCTGATGGTAGATCTCAGTTCCTAAGCCACAGTGGTGCAATTGCTGTGGTCTCCAAC
AGGATGCTCAATGTTTCCATAGCAGCCGACGATCGAGCCATTTTGATACTTTCTTTGATA
AGCAAGTACTGCGGGACTTGTGTGGTACTTGAGGAGATGATCAGTGTTAGAGCTGTTTCT
AAGCTTTGTGTGGTGCTCCAAGCTGACTACGCACATTATTTGAAAGAAAAAGCAAGGGAA
ATTCTAAGATCACACTACGATTTCTGGAAGAACTCTCCTTGTTTCATCTCTTCTCCCTTG
TCAAAGATCCAATTAATTTGA

Peptide Sequence

PEP ID

VIT_08s0105g00200.t01
PEP Infomation

pep chromosome:12X:8:7180690:7182105:-1 gene:VIT_08s0105g00200 transcript:VIT_08s0105g00200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6H6S6]
Sequence

MDDVEIPEYFICPISLQIMRDPVTAITGITYDRESIENWLFKGNNTCPVTKQPLPPDSDL
TPNHTLRRLIQSWCTENASNGVVRIPTPKAPLTKSHVVKLVKELWVPQLQLKTLRKLELL
AMENERNRRYMVEAGVIKSMSSFLVACFNKQQTVGLEEALSILYLIRVNPTSETRLLPIE
NDRIMETFTWILQCKMDGHSSIKAHALLVLKVMVKTASSTQLERLKPEFLSSVVGVLREG
ISHQGINAALHILLDTCPWGRNRMSMIESGAIHDVIEIELGMPERRTTELILGILFHLCS
CADGRSQFLSHSGAIAVVSNRMLNVSIAADDRAILILSLISKYCGTCVVLEEMISVRAVS
KLCVVLQADYAHYLKEKAREILRSHYDFWKNSPCFISSPLSKIQLI

Transcript Sequence

Transcript ID

VIT_08s0105g00200.t01
Transcript Infomation

cdna chromosome:12X:8:7180690:7182105:-1 gene:VIT_08s0105g00200 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-type E3 ubiquitin transferase [Source:UniProtKB/TrEMBL;Acc:F6H6S6]
Sequence

TCTGAGCGCGTGTGTAGATTTCCTCAATTTTTGAGCTCATTTTCATGGATGATGTTGAAA
TTCCTGAGTACTTCATCTGTCCCATATCGCTTCAGATCATGAGAGATCCAGTTACAGCCA
TAACTGGAATCACATACGATCGAGAGAGCATCGAAAACTGGCTGTTCAAAGGCAACAACA
CATGCCCAGTCACCAAACAACCATTACCCCCTGATTCTGACTTGACTCCCAATCACACCC
TCCGGCGATTGATCCAATCTTGGTGCACTGAGAATGCTTCAAACGGCGTGGTTCGGATTC
CCACTCCTAAGGCTCCTCTCACCAAGTCTCATGTTGTGAAGCTGGTGAAGGAGCTTTGGG
TTCCTCAGTTGCAGCTCAAAACTCTGAGGAAGTTGGAGTTGCTTGCTATGGAGAATGAGA
GAAACAGGAGGTATATGGTGGAAGCTGGGGTAATTAAAAGCATGTCGTCATTTCTTGTGG
CTTGTTTCAATAAACAGCAGACTGTTGGCCTTGAAGAAGCTCTCAGCATTCTCTATCTGA
TTCGGGTTAATCCAACTTCCGAGACAAGGCTACTACCGATTGAAAATGATAGAATTATGG
AAACTTTTACATGGATTTTGCAGTGCAAGATGGATGGTCACAGCAGTATTAAAGCACATG
CGCTGTTGGTGTTGAAGGTAATGGTGAAAACAGCAAGCTCCACCCAGCTAGAGAGGCTAA
AACCTGAGTTCTTGTCGAGTGTTGTAGGGGTGCTTAGGGAAGGGATCTCGCACCAGGGCA
TCAATGCCGCCTTGCACATCTTGCTAGACACGTGTCCGTGGGGAAGAAACCGAATGAGTA
TGATTGAATCCGGGGCAATTCATGACGTCATAGAGATTGAATTAGGAATGCCGGAGAGGA
GGACGACGGAGCTGATTCTAGGGATATTGTTTCATCTATGCTCCTGCGCTGATGGTAGAT
CTCAGTTCCTAAGCCACAGTGGTGCAATTGCTGTGGTCTCCAACAGGATGCTCAATGTTT
CCATAGCAGCCGACGATCGAGCCATTTTGATACTTTCTTTGATAAGCAAGTACTGCGGGA
CTTGTGTGGTACTTGAGGAGATGATCAGTGTTAGAGCTGTTTCTAAGCTTTGTGTGGTGC
TCCAAGCTGACTACGCACATTATTTGAAAGAAAAAGCAAGGGAAATTCTAAGATCACACT
ACGATTTCTGGAAGAACTCTCCTTGTTTCATCTCTTCTCCCTTGTCAAAGATCCAATTAA
TTTGATAATTAAACAGATATATATGATTGCCCTCTTTTTATTTTTATATGTATCATCAGC
TTGTTTGGTTGTTGTTTTTTTCTCTTTTCCTTTTCTTGGGAAAACAAAGAAGAGAAAAAA
AAAAGATCCACTTAAACCATATTACTCTTATTTGAA