Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0058g01200.t01
CDS Infomation

cds chromosome:12X:8:10683120:10683967:-1 gene:VIT_08s0058g01200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6GXX5]
Sequence

ATGGCCGTCAAAGCAATAATCCATATTCTGTTGCCTCTTGTCTTCTTCCTTGTCTTCAGT
TCATTTGTCCCAAGAATTTACAGTGACGGTGGTGGGTGGCAGAATGCCCACGCCACATTC
TACGGCAACCAAGATATGGGGGGAGCATGTGGATATGGTGCCGCTACGAGCTACGGTCCC
TACACCGCAGCACTAAGCAATGCTCTATTCAACGATGGGTACAGCTGCGGGTCGTGTTAT
GAGTTGCAGTGCACCAACGACAGACAGTGGTGCATCGCAGGCACCGTCACCGTGACTGCT
ACCAACAACTGTCCGCCGGACCCGAGTAAACCTAATGACAACGGTGGGTGGTGCAACCCC
CCTCTCCAACACTTCGACTTGTCGGAGCCTGCCTTCTTGAAGATCGCGCAGTATAAGGCT
GGGATAGTTCCGGTACTGTACAGAAGGGTTTCGTGTGCTGTGCAAGGAGGCATAAGGTTC
ACCATGAACGGCAACCCCGACTTCATCTTGGTATTGATATCGAATGTGGGTAGTGCAGGG
GATGTCCGAGCCGTCTCCATTAAAGGATCCGGGACAGGGTGGGAAACCATGACTAGGAAC
TGGGGCCAAAACTGGCAGAGCAACGCCAAACTGATTGGTCAAAGCATATCCTTCAAGGTC
ACCACCAGCGATGGCAAGTCCGTGACCAGCAACGATGTAGTGCCAGCCAATTGGAAATTT
GGACAAACTTTTGAAGGAGCTCAGTTCTAG

Peptide Sequence

PEP ID

VIT_08s0058g01200.t01
PEP Infomation

pep chromosome:12X:8:10683120:10683967:-1 gene:VIT_08s0058g01200 transcript:VIT_08s0058g01200.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6GXX5]
Sequence

MAVKAIIHILLPLVFFLVFSSFVPRIYSDGGGWQNAHATFYGNQDMGGACGYGAATSYGP
YTAALSNALFNDGYSCGSCYELQCTNDRQWCIAGTVTVTATNNCPPDPSKPNDNGGWCNP
PLQHFDLSEPAFLKIAQYKAGIVPVLYRRVSCAVQGGIRFTMNGNPDFILVLISNVGSAG
DVRAVSIKGSGTGWETMTRNWGQNWQSNAKLIGQSISFKVTTSDGKSVTSNDVVPANWKF
GQTFEGAQF

Transcript Sequence

Transcript ID

VIT_08s0058g01200.t01
Transcript Infomation

cdna chromosome:12X:8:10683120:10683967:-1 gene:VIT_08s0058g01200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Expansin [Source:UniProtKB/TrEMBL;Acc:F6GXX5]
Sequence

ATGGCCGTCAAAGCAATAATCCATATTCTGTTGCCTCTTGTCTTCTTCCTTGTCTTCAGT
TCATTTGTCCCAAGAATTTACAGTGACGGTGGTGGGTGGCAGAATGCCCACGCCACATTC
TACGGCAACCAAGATATGGGGGGAGCATGTGGATATGGTGCCGCTACGAGCTACGGTCCC
TACACCGCAGCACTAAGCAATGCTCTATTCAACGATGGGTACAGCTGCGGGTCGTGTTAT
GAGTTGCAGTGCACCAACGACAGACAGTGGTGCATCGCAGGCACCGTCACCGTGACTGCT
ACCAACAACTGTCCGCCGGACCCGAGTAAACCTAATGACAACGGTGGGTGGTGCAACCCC
CCTCTCCAACACTTCGACTTGTCGGAGCCTGCCTTCTTGAAGATCGCGCAGTATAAGGCT
GGGATAGTTCCGGTACTGTACAGAAGGGTTTCGTGTGCTGTGCAAGGAGGCATAAGGTTC
ACCATGAACGGCAACCCCGACTTCATCTTGGTATTGATATCGAATGTGGGTAGTGCAGGG
GATGTCCGAGCCGTCTCCATTAAAGGATCCGGGACAGGGTGGGAAACCATGACTAGGAAC
TGGGGCCAAAACTGGCAGAGCAACGCCAAACTGATTGGTCAAAGCATATCCTTCAAGGTC
ACCACCAGCGATGGCAAGTCCGTGACCAGCAACGATGTAGTGCCAGCCAATTGGAAATTT
GGACAAACTTTTGAAGGAGCTCAGTTCTAGGTT