Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0058g01180.t01
CDS Infomation

cds chromosome:12X:8:10650470:10661269:1 gene:VIT_08s0058g01180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCCCCCAGTTAACAATTGATGAGAATCTTCTTGTTGATCCAAAATTAATTTTTATC
GGATCGAAAGTTGGTGAAGGAGCACATGGGAAAGTTTATGAAGGAAGGTATGGTGATCAA
ATTGTTGCTATCAAAGTTCTCCACCGTGGAAGCACTTCAGAAGAAAGAGCTGCACTTGAG
GGACGTTTTGCCCGGGAAGTTAATATGATGTCAAGAGTAAAACATGAGAATCTTGTCAAG
TTTATTGGAGCTTGTAAGGATCCTTTAATGGTGATAGTTACAGAGCTATTACCAGGTATG
TCACTTCGGAAGTATTTAACCAGTATTCGTCCAAAACGGATGGACATTCATGTTGCATTA
AGTTTTGCTCTTGACATTGCTCGAGCCATGGAGTGTTTGCATGCCAATGGGATTATACAT
AGAGATCTTAAACCTGACAATTTGTTGCTTACGGCCAATCAGAAATCTGTAAAGCTTGCA
GATTTTGGTCTTGCAAGGGAAGAATCTGTGACTGAGATGATGACCGCAGAAACTGGGACA
TACCGTTGGATGGCTCCCGAGCTGTACAGCACTGTGACATTGCGTCAGGGTGAGAAGAAG
CATTATAATAACAAGGTTGATGTCTACAGCTTTGGGATTGTCTTCTGGGAATTATTGACC
AATCGCATGCCATTTGAAGGCATGTCAAATTTGCAGGCCGCTTATGCTGCTGCATTTAAG
CAAGAGCGCCCTAGTCTTCCAGAAGACATATCCCCTGATCTTGCATTTATCATACAATCT
TGTTGGGTTGAGGACCCTAACATGCGACCCAGCTTCAGCCAGATCATCCGCATGCTGAAC
ACATTTCATTTCAAAGTCACACCACCTCCATCATCATTACTAGAAGAATCTGACACCAAT
GGAGCAGCAATGTCTAGCAATGGTACCATGACCGAGTTGTCCGCACGTACGAGAGGGAAG
TTTTCTTTCCTTCGCCAACTTTTTGCTGCAAAGAGGACAAGGAATTCACAGTGA

Peptide Sequence

PEP ID

VIT_08s0058g01180.t01
PEP Infomation

pep chromosome:12X:8:10650470:10661269:1 gene:VIT_08s0058g01180 transcript:VIT_08s0058g01180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPQLTIDENLLVDPKLIFIGSKVGEGAHGKVYEGRYGDQIVAIKVLHRGSTSEERAALE
GRFAREVNMMSRVKHENLVKFIGACKDPLMVIVTELLPGMSLRKYLTSIRPKRMDIHVAL
SFALDIARAMECLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGT
YRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVFWELLTNRMPFEGMSNLQAAYAAAFK
QERPSLPEDISPDLAFIIQSCWVEDPNMRPSFSQIIRMLNTFHFKVTPPPSSLLEESDTN
GAAMSSNGTMTELSARTRGKFSFLRQLFAAKRTRNSQ

Transcript Sequence

Transcript ID

VIT_08s0058g01180.t01
Transcript Infomation

cdna chromosome:12X:8:10650470:10661269:1 gene:VIT_08s0058g01180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAAACCATCAACTCGGAACAAAGAAGCTTACACTATGAAGCAGATGATCCAGACTCATCG
TTTTGGTTGCTCTTTCGTTCTCGGGAATTTCTTGCTTCTTCTGTAAGTTTCTCTTGTTTG
CTCTTGTTTTCTATCCAGGGATTATCTTTCTTTTCATTTGCACGGGCGACGATGCTTCAC
GCTCGGGTTCAATTCTCGGGTGTTTGAATACAGAGGCTTAAAGGAAAGCTCTTTTCCCGT
GGTTTTGTTTCATTTATCTGCGAAAAATTTCGCGTTTGAGGTAGCCGTTGAAGGTGATAG
CAGAGTCTTGGTTCACTCCTGAATGGTTAATTTGGAGGAGAGCGTGAAAACAGTTGGAAA
GATTGGGTTCTTGCTTGGTGATTGTGGAGAAATGTCTACGGAGGGCTGACGATCATTAAT
AATCAGAGAATAGATATTGAAATGAGGAACTCGGGCATAATCTGAGGTTGCAGCATGAGT
TGCAGCGAGAGTAATACAGGAGGAGAACAAGGGGAAATTGAGGAATCGATTATAAGAAAT
TCCGTTGAGGTCGACCCAAAATCTTTCACCCAGAATGGGTCGATTATGGCCCCCCAGTTA
ACAATTGATGAGAATCTTCTTGTTGATCCAAAATTAATTTTTATCGGATCGAAAGTTGGT
GAAGGAGCACATGGGAAAGTTTATGAAGGAAGGTATGGTGATCAAATTGTTGCTATCAAA
GTTCTCCACCGTGGAAGCACTTCAGAAGAAAGAGCTGCACTTGAGGGACGTTTTGCCCGG
GAAGTTAATATGATGTCAAGAGTAAAACATGAGAATCTTGTCAAGTTTATTGGAGCTTGT
AAGGATCCTTTAATGGTGATAGTTACAGAGCTATTACCAGGTATGTCACTTCGGAAGTAT
TTAACCAGTATTCGTCCAAAACGGATGGACATTCATGTTGCATTAAGTTTTGCTCTTGAC
ATTGCTCGAGCCATGGAGTGTTTGCATGCCAATGGGATTATACATAGAGATCTTAAACCT
GACAATTTGTTGCTTACGGCCAATCAGAAATCTGTAAAGCTTGCAGATTTTGGTCTTGCA
AGGGAAGAATCTGTGACTGAGATGATGACCGCAGAAACTGGGACATACCGTTGGATGGCT
CCCGAGCTGTACAGCACTGTGACATTGCGTCAGGGTGAGAAGAAGCATTATAATAACAAG
GTTGATGTCTACAGCTTTGGGATTGTCTTCTGGGAATTATTGACCAATCGCATGCCATTT
GAAGGCATGTCAAATTTGCAGGCCGCTTATGCTGCTGCATTTAAGCAAGAGCGCCCTAGT
CTTCCAGAAGACATATCCCCTGATCTTGCATTTATCATACAATCTTGTTGGGTTGAGGAC
CCTAACATGCGACCCAGCTTCAGCCAGATCATCCGCATGCTGAACACATTTCATTTCAAA
GTCACACCACCTCCATCATCATTACTAGAAGAATCTGACACCAATGGAGCAGCAATGTCT
AGCAATGGTACCATGACCGAGTTGTCCGCACGTACGAGAGGGAAGTTTTCTTTCCTTCGC
CAACTTTTTGCTGCAAAGAGGACAAGGAATTCACAGTGAGCTGGTAAATTTTTGAAATTT
TTTTTCTTTTTGTTCCAACTCAAAAGGGAAATGGCATGCAATGGTAGATATCATCATATT
TTTAGTGAATCTTAATTGCGTATGAAATGATGATTATTAAAGTACGGAAAATGTTGGAAA
TAAATGGTGTTAATGGGAGAACACATTGGAAATTAAGAAGCAAAATAGAGGACTTGACCT
TGTTGTAAAGGTGAGACATGGTTTTAGATGTTTTGTTCATATCAGTGTTATCCTTTTGAA
GGTGCATATTATAGCGCACTTTTAGTGATTAAATTTCAAGTAACTTGTAGGTCATCTAAC
GGTTGCC