Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0058g01040.t01
CDS Infomation

cds chromosome:12X:8:10383835:10385335:1 gene:VIT_08s0058g01040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A5BJJ8]
Sequence

ATGGAAAATAATGGGAGTATCCTGATGCAACGGTATGAATTAGGGAAATTATTAGGTCAA
GGCACCTTTGCCAAGGTCCATCATGCCAGGAACCTTAAAACTGGCACCAGTGTTGCCATT
AAGATAATTGATAAAGAGAAGATTTTGAAGGTTGGGATGGTGGATCAGATTAAGCGAGAG
ATTTCTGTAATGAGACTGGTTAGACACCCAAATGTGGTAGAGCTTTATGAGGTTATGGCC
AGCAAAACGAAGATTTACTTTGTCATGGAATATGCTAAAGGAGGGGAGCTCTTCAACAAG
GTAGCCAAAGGAAAGCTCAAGGAGGATGTTGCAAGGAAATATTTTCAACAGCTGATCAGT
GCGGTTGATTTCTGTCACAGTAGAGGTGTTTATCATCGGGATTTAAAGCCAGAAAACCTT
CTACTGGATGAGAATGGAAATCTAAAAGTTTCAGACTTTGGACTGAGTGCCCTTGCTGAA
TCTAAGCACCAAGATGGGTTGCTTCACACAACCTGTGGAACCCCCGCCTATGTTGCTCCA
GAGGTGATCAATAGGAAAGGCTATGATGGAGCCAAAGCTGATATATGGTCATGTGGGGTG
GTCTTATTCGTTTTGTTGGCTGGCTATCTCCCATTTCATGATTCAAATCTGATGGAGTTG
TATAGGAAGATTGGTAAGGCAGAATATAGATTCCCTAACTGGTTCCCTTCGGAAGTACGA
AGGTTGCTGTCAAAGATCTTGGATCCAAACCCAAAGACTAGGATTTCCATTACCAAAATA
ATGGAAAATTCTTGGTTCCAAAAGGGTCTTGATCCTGTCCTGAGGATCACTGAAACAGGA
GAGAAAGAGCCAGCTGATCTCGAGGTTGAGGCTGTATTTGGTTCTAATGAGAGTGCCAGC
ACCACTGCTGAGGCAAAGCAAGAATTGGCGACGCTTAGTAACTTGAATGCGTTTGATATC
ATTTCCTTTTCAGCAGGGTTTGACTTGTCTGGTTTGTTCGAGGAAAATAAGCAAAAGAAA
GAAGTGCGATTTACATCTAGGCAGCCAGCCTCAGCCATCATCTCTAAACTGGAGGACATT
GCTAAGCGTTTGATGCTGAAGGTGAAGAAGAAGGATGGTGGGTTGTTGAAAATGGAAGGT
TCAAAGGAAGGCAGGAAAGGCGTCTTGTCCATTGATGCAGAGATCTTTGAGGTGACTCCA
TCTTTTCATTTGGTGGAGGTGAAGAAGTCCAGTGGGGACACGTTGGAGTACCAGAAAATA
GTGAAACAGGAGATAAGACCAGCTCTCAAGGACATTGTGTGGGCATGGCAAGGTGAGCAG
CAGCAGCAGCAACAACAACCAGAAGAGCCAATGCCCCTATTGCAGCCCATCTCACCTCCA
GCTTCATAA

Peptide Sequence

PEP ID

VIT_08s0058g01040.t01
PEP Infomation

pep chromosome:12X:8:10383835:10385335:1 gene:VIT_08s0058g01040 transcript:VIT_08s0058g01040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A5BJJ8]
Sequence

MENNGSILMQRYELGKLLGQGTFAKVHHARNLKTGTSVAIKIIDKEKILKVGMVDQIKRE
ISVMRLVRHPNVVELYEVMASKTKIYFVMEYAKGGELFNKVAKGKLKEDVARKYFQQLIS
AVDFCHSRGVYHRDLKPENLLLDENGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAP
EVINRKGYDGAKADIWSCGVVLFVLLAGYLPFHDSNLMELYRKIGKAEYRFPNWFPSEVR
RLLSKILDPNPKTRISITKIMENSWFQKGLDPVLRITETGEKEPADLEVEAVFGSNESAS
TTAEAKQELATLSNLNAFDIISFSAGFDLSGLFEENKQKKEVRFTSRQPASAIISKLEDI
AKRLMLKVKKKDGGLLKMEGSKEGRKGVLSIDAEIFEVTPSFHLVEVKKSSGDTLEYQKI
VKQEIRPALKDIVWAWQGEQQQQQQQPEEPMPLLQPISPPAS

Transcript Sequence

Transcript ID

VIT_08s0058g01040.t01
Transcript Infomation

cdna chromosome:12X:8:10383835:10385335:1 gene:VIT_08s0058g01040 gene_biotype:protein_coding transcript_biotype:protein_coding description:Non-specific serine/threonine protein kinase [Source:UniProtKB/TrEMBL;Acc:A5BJJ8]
Sequence

TTTGAACTTGCAATGGAAAATAATGGGAGTATCCTGATGCAACGGTATGAATTAGGGAAA
TTATTAGGTCAAGGCACCTTTGCCAAGGTCCATCATGCCAGGAACCTTAAAACTGGCACC
AGTGTTGCCATTAAGATAATTGATAAAGAGAAGATTTTGAAGGTTGGGATGGTGGATCAG
ATTAAGCGAGAGATTTCTGTAATGAGACTGGTTAGACACCCAAATGTGGTAGAGCTTTAT
GAGGTTATGGCCAGCAAAACGAAGATTTACTTTGTCATGGAATATGCTAAAGGAGGGGAG
CTCTTCAACAAGGTAGCCAAAGGAAAGCTCAAGGAGGATGTTGCAAGGAAATATTTTCAA
CAGCTGATCAGTGCGGTTGATTTCTGTCACAGTAGAGGTGTTTATCATCGGGATTTAAAG
CCAGAAAACCTTCTACTGGATGAGAATGGAAATCTAAAAGTTTCAGACTTTGGACTGAGT
GCCCTTGCTGAATCTAAGCACCAAGATGGGTTGCTTCACACAACCTGTGGAACCCCCGCC
TATGTTGCTCCAGAGGTGATCAATAGGAAAGGCTATGATGGAGCCAAAGCTGATATATGG
TCATGTGGGGTGGTCTTATTCGTTTTGTTGGCTGGCTATCTCCCATTTCATGATTCAAAT
CTGATGGAGTTGTATAGGAAGATTGGTAAGGCAGAATATAGATTCCCTAACTGGTTCCCT
TCGGAAGTACGAAGGTTGCTGTCAAAGATCTTGGATCCAAACCCAAAGACTAGGATTTCC
ATTACCAAAATAATGGAAAATTCTTGGTTCCAAAAGGGTCTTGATCCTGTCCTGAGGATC
ACTGAAACAGGAGAGAAAGAGCCAGCTGATCTCGAGGTTGAGGCTGTATTTGGTTCTAAT
GAGAGTGCCAGCACCACTGCTGAGGCAAAGCAAGAATTGGCGACGCTTAGTAACTTGAAT
GCGTTTGATATCATTTCCTTTTCAGCAGGGTTTGACTTGTCTGGTTTGTTCGAGGAAAAT
AAGCAAAAGAAAGAAGTGCGATTTACATCTAGGCAGCCAGCCTCAGCCATCATCTCTAAA
CTGGAGGACATTGCTAAGCGTTTGATGCTGAAGGTGAAGAAGAAGGATGGTGGGTTGTTG
AAAATGGAAGGTTCAAAGGAAGGCAGGAAAGGCGTCTTGTCCATTGATGCAGAGATCTTT
GAGGTGACTCCATCTTTTCATTTGGTGGAGGTGAAGAAGTCCAGTGGGGACACGTTGGAG
TACCAGAAAATAGTGAAACAGGAGATAAGACCAGCTCTCAAGGACATTGTGTGGGCATGG
CAAGGTGAGCAGCAGCAGCAGCAACAACAACCAGAAGAGCCAATGCCCCTATTGCAGCCC
ATCTCACCTCCAGCTTCATAACATGTGAAAGTATCTTACTCTTAGTTGTAATTCTAATCT
GTAAGTTTTAACGTGGTTTCTCCTATAGATATAAATGAAGTGTTTGTTGTTGACATCATT
A