Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0058g01000.t01
CDS Infomation

cds chromosome:12X:8:10345439:10349930:1 gene:VIT_08s0058g01000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:D7SR19]
Sequence

ATGCAAAGGAGGAGGATGATGATCAAGTGGGCACGTGATACTGTGAGAAGAAGATTCATG
TCAACCTCAGCCGCTGCCATTGATTGGTGGGATCATGTGGGTCACGCCCCTAAGGACCCC
ATCATGAGTGTTACTGAGGCTTTTCTTTCTGATACCAGCCCCAACAAGATCAATCTTGGA
GTGGGGGCTTACAGGGATGATGATGGAAGACCTGTGGTTCTTCAGTGCGTTAGAGATGGG
GAGGTAAAGATTGCGGGCACCGAGTTCCTGGAGTCAGTTTCAGCTTCAGTTAGTTCAAAA
CTAGTCGAGGAGAGTGTCAAGTTGATTTATGGAAAGGAGGCAGATTTCATAAAAGAAGGA
AGATTTGCGGGGGTCCAAGCTCTCTCTGGCACTGGTGCTTGCCGTCTCTTTGCTGAGTTT
CAGAGGCGTTTCTATCCTCAATCAAGAATATATTTACCCATTCCAACTTGGTCCAACCAC
CATAACATCTGGAGAGATGCCCAAGTTCCAGGGAGAACCTTCCATTACTACCATCCTGAC
TCTAAGGGATTACACTTTGCTGCACTTATGGACGATATCAAGAATGCTCCAGATCGTTCC
TTTTTCTTGCTCCATCCTTGTGCTCACAACCCAACAGGGGTTGACCCAACTGAGGAACAA
TGGAGAGAGATCTCAAATCTTTTCAAGGTAAAAAATCATTTTCCCTTCTTTGACATGGCT
TATCAAGGTTTCGCTAGTGGGGACCTTGACAAGGATGCCAAGGCTATCCGGATATTTCTT
GAAGATGGACATTTAATAGGCTGTGCTCAGTCCTTTGCTAAAAATATGGGATTATATGGG
CACAGAGTGGGCTGTCTCAGTGTTCTTTGTGTGGATGCAAAGCAAGCAGTTGCAATTAAA
AGCCAACTACAGCATATTACTAGGGCAATGTACAGCAGCCCTCCTGTCCATGGCATATTA
CTGGTTTCAACAATCTTGAGTGACCCACATCTAAAGGAGCTTTGGAAAAAAGAGCTGAAG
GTAATGGCAAACCGCATTCATAGGATGCGGTCCACTCTACATGAAAGTCTCAAGAAGCTG
GGTTCTCCCCTAAACTGGGATCACATGACTAACCAGGTTGGGATGTTTTGCTTCTCTGGC
TTATCCCCGGATCAGGTTAATAGACTGGTGAAGGAATTCCATATATACATGACTTATGAT
GGTCGCATAAGTATGGCAGGTGTGACTACAAGCAATGTGAGTTACTTGGCAAATGCAATA
CATGAAGTTACTAAATTTGGCTGA

Peptide Sequence

PEP ID

VIT_08s0058g01000.t01
PEP Infomation

pep chromosome:12X:8:10345439:10349930:1 gene:VIT_08s0058g01000 transcript:VIT_08s0058g01000.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:D7SR19]
Sequence

MQRRRMMIKWARDTVRRRFMSTSAAAIDWWDHVGHAPKDPIMSVTEAFLSDTSPNKINLG
VGAYRDDDGRPVVLQCVRDGEVKIAGTEFLESVSASVSSKLVEESVKLIYGKEADFIKEG
RFAGVQALSGTGACRLFAEFQRRFYPQSRIYLPIPTWSNHHNIWRDAQVPGRTFHYYHPD
SKGLHFAALMDDIKNAPDRSFFLLHPCAHNPTGVDPTEEQWREISNLFKVKNHFPFFDMA
YQGFASGDLDKDAKAIRIFLEDGHLIGCAQSFAKNMGLYGHRVGCLSVLCVDAKQAVAIK
SQLQHITRAMYSSPPVHGILLVSTILSDPHLKELWKKELKVMANRIHRMRSTLHESLKKL
GSPLNWDHMTNQVGMFCFSGLSPDQVNRLVKEFHIYMTYDGRISMAGVTTSNVSYLANAI
HEVTKFG

Transcript Sequence

Transcript ID

VIT_08s0058g01000.t01
Transcript Infomation

cdna chromosome:12X:8:10345439:10349930:1 gene:VIT_08s0058g01000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aspartate aminotransferase [Source:UniProtKB/TrEMBL;Acc:D7SR19]
Sequence

CCACCTTCTTCAAGAACCTCAACTCTCCGAACTCGATTCAGCAGCTTTCCACAGGGTCTG
GCATTGAGACTGTAAAAACAAATGCAAAGGAGGAGGATGATGATCAAGTGGGCACGTGAT
ACTGTGAGAAGAAGATTCATGTCAACCTCAGCCGCTGCCATTGATTGGTGGGATCATGTG
GGTCACGCCCCTAAGGACCCCATCATGAGTGTTACTGAGGCTTTTCTTTCTGATACCAGC
CCCAACAAGATCAATCTTGGAGTGGGGGCTTACAGGGATGATGATGGAAGACCTGTGGTT
CTTCAGTGCGTTAGAGATGGGGAGGTAAAGATTGCGGGCACCGAGTTCCTGGAGTCAGTT
TCAGCTTCAGTTAGTTCAAAACTAGTCGAGGAGAGTGTCAAGTTGATTTATGGAAAGGAG
GCAGATTTCATAAAAGAAGGAAGATTTGCGGGGGTCCAAGCTCTCTCTGGCACTGGTGCT
TGCCGTCTCTTTGCTGAGTTTCAGAGGCGTTTCTATCCTCAATCAAGAATATATTTACCC
ATTCCAACTTGGTCCAACCACCATAACATCTGGAGAGATGCCCAAGTTCCAGGGAGAACC
TTCCATTACTACCATCCTGACTCTAAGGGATTACACTTTGCTGCACTTATGGACGATATC
AAGAATGCTCCAGATCGTTCCTTTTTCTTGCTCCATCCTTGTGCTCACAACCCAACAGGG
GTTGACCCAACTGAGGAACAATGGAGAGAGATCTCAAATCTTTTCAAGGTAAAAAATCAT
TTTCCCTTCTTTGACATGGCTTATCAAGGTTTCGCTAGTGGGGACCTTGACAAGGATGCC
AAGGCTATCCGGATATTTCTTGAAGATGGACATTTAATAGGCTGTGCTCAGTCCTTTGCT
AAAAATATGGGATTATATGGGCACAGAGTGGGCTGTCTCAGTGTTCTTTGTGTGGATGCA
AAGCAAGCAGTTGCAATTAAAAGCCAACTACAGCATATTACTAGGGCAATGTACAGCAGC
CCTCCTGTCCATGGCATATTACTGGTTTCAACAATCTTGAGTGACCCACATCTAAAGGAG
CTTTGGAAAAAAGAGCTGAAGGTAATGGCAAACCGCATTCATAGGATGCGGTCCACTCTA
CATGAAAGTCTCAAGAAGCTGGGTTCTCCCCTAAACTGGGATCACATGACTAACCAGGTT
GGGATGTTTTGCTTCTCTGGCTTATCCCCGGATCAGGTTAATAGACTGGTGAAGGAATTC
CATATATACATGACTTATGATGGTCGCATAAGTATGGCAGGTGTGACTACAAGCAATGTG
AGTTACTTGGCAAATGCAATACATGAAGTTACTAAATTTGGCTGAGAAGCGTACATGTAT
TCTTTGAAAATGAGGAACTTCACTTACAGTCGATACCTTTTGGGAAGTGATATTGTATGG
TGTACAAACATTTGAAAATGAGGAATACGAGGATAAAAATTGTGGCCCTTCTATTTTGAA
CTGTGGCAACTATGGAGTTAGAACAAGTCTGACTTCCCTCCAAATGCACAATTCCAATGT
ATTTTCTAAGCTTTGAAAGTTATTGTTTTATGAATAGGGACATGAACAGGGCCGGTCAAG
GAGGGCTTCCCGTCGCCGTTTATGTCTATGAATTTATTTCTCATCCCTGTCTCATTTCTC
GGCTTAGA