Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0058g00940.t01
CDS Infomation

cds chromosome:12X:8:10256365:10268142:-1 gene:VIT_08s0058g00940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTGTCCAGGACAACCTCGGTGGCCGCCATATCTCACCGTCTCCATCAAATCTTCCCC
CAGTTTTCCTCCTATTTACCAAAGATGAATTCTGTCGACGGCTCCATGGAGAGAGTTTCG
CGCGATATTTGCAGTGACTCTGTGAGGAATTTTGCAATGGTTGCACGCAGTGGCTCAAAG
GAACCCGTGTCCTTGTTTGATTCTTCCTATGCCGAGGAATTTCCTATGCTCTCTCCCGAT
GGTATTTTGCCTATTAAGAATAGAAAGTCCAATAAAATGAGAACTCGGGTGGATCTAAGT
ACGGAAGTGGGCACGAGAGAAAATAGTTCTTTGCACCATGAGAGCCCACCTATGTCCAAT
TCCACTTTCCAGCAGTATGGCACTTCTCTCCCTTCTGATGACACTTCTTTCCCTTCTGAT
TGTCAAGAGAAGGGAACGCCTTCTTATTCTAGAGAACTCCATCATGTTCAAAGTTGTGTA
GATGACGAAGTTAGTAGTACAAATGCCAATCAGGATGACTCCAAGCTGCCCACTAGTCTT
GGGAAGAAGAGCATGCCTCCACATTTGAGACAGCGTGAATATGAAGACAGTACTAGGAAA
GATGAGTCTGATAACTCTTATCTGCCTACTCAATTTGGGAAAAAGAGCACACCTCCTCAC
TCCAGAAAGCCCCAGCGAGGCCAACCCTATCACAGGCATGATGTTGGTACTGGAAATTCT
GAATGCCCCAGAGGTTTGCAGAAGTTTGAACCATTTGATATCTGCAAGTCTGGCGTCATG
CATCCTGTCAAGAAGTGCCTAATCCCTGAACAAAATGAAATAAAGCACTCCATGGAAGGG
ACTACACAAGAAGTGCTTAGACCTGGCATGGTTCTGTTAAAAGGTTACATCAGCCTCACT
GAACAGATCAAGATGGTAAAGAAATGTCGAGATCTTGGTGTAGGGCCAGGTGGCTTTTAC
AGACCTGGTTATCAAGATGGAGCCAAACTTCGTTTGCAGATGATGTGCCTTGGTATGAAT
TGGGATCCTCAAACAAGGAAATATGAAAAATGGCATCCACTTGATGGTTCTGAGACACCT
GACATTCCCCATGAATTTAGTGTGCTGGTTGAAAGAGCGATACAAGATTCACAGTCCCTT
ATTAAAAAGAATAGTGGTGAGAACAATGTGGAAGACACACTCCCGAGGATGTCTCCAAAT
ATATGCATTGTGAACTTCTATACGACCAGTGGGCGGCTTGGTCTCCATCAGGACCGTGAT
GAAAGCGAAGAGAGCCTCCTTAAAGGATTACCCGTGGTCTCTTTCTCCCTTGGCGACTCA
GCAGAGTTCTTATATGGGAATCAAAGAAATGTAGATGCAGCAGGTAAAGTTGTATTGGAA
TCAGGAGATGTCCTAATATTTGGTGGTCCCTCAAGGCATATTTTTCATGGGGTGTCATCA
ATTATCCCTAACTCAGCTCCAAACTCCCTACTAGAAGAAACAAATCTTCTTCCTGGCCGT
CTAAACCTTACCCTCAGGCAGCTTTGA

Peptide Sequence

PEP ID

VIT_08s0058g00940.t01
PEP Infomation

pep chromosome:12X:8:10256365:10268142:-1 gene:VIT_08s0058g00940 transcript:VIT_08s0058g00940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLSRTTSVAAISHRLHQIFPQFSSYLPKMNSVDGSMERVSRDICSDSVRNFAMVARSGSK
EPVSLFDSSYAEEFPMLSPDGILPIKNRKSNKMRTRVDLSTEVGTRENSSLHHESPPMSN
STFQQYGTSLPSDDTSFPSDCQEKGTPSYSRELHHVQSCVDDEVSSTNANQDDSKLPTSL
GKKSMPPHLRQREYEDSTRKDESDNSYLPTQFGKKSTPPHSRKPQRGQPYHRHDVGTGNS
ECPRGLQKFEPFDICKSGVMHPVKKCLIPEQNEIKHSMEGTTQEVLRPGMVLLKGYISLT
EQIKMVKKCRDLGVGPGGFYRPGYQDGAKLRLQMMCLGMNWDPQTRKYEKWHPLDGSETP
DIPHEFSVLVERAIQDSQSLIKKNSGENNVEDTLPRMSPNICIVNFYTTSGRLGLHQDRD
ESEESLLKGLPVVSFSLGDSAEFLYGNQRNVDAAGKVVLESGDVLIFGGPSRHIFHGVSS
IIPNSAPNSLLEETNLLPGRLNLTLRQL

Transcript Sequence

Transcript ID

VIT_08s0058g00940.t01
Transcript Infomation

cdna chromosome:12X:8:10256365:10268142:-1 gene:VIT_08s0058g00940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAAAACCAAAATGGCCTCTGATGCGCGCGTCTCCACCTCGATTACTTCAAACGCGCCTA
CTACCCCAAAGAATACGAGAATACAAAGACTTGAAGAATAAGCATATGTACCGTCTTAAT
TATTCACGCACTCCAACTCTGAGACGCGAAGCATCAAATACTGATTACTCTCCTCCTTTA
TGTTGTCCAGGACAACCTCGGTGGCCGCCATATCTCACCGTCTCCATCAAATCTTCCCCC
AGTTTTCCTCCTATTTACCAAAGATGAATTCTGTCGACGGCTCCATGGAGAGAGTTTCGC
GCGATATTTGCAGTGACTCTGTGAGGAATTTTGCAATGGTTGCACGCAGTGGCTCAAAGG
AACCCGTGTCCTTGTTTGATTCTTCCTATGCCGAGGAATTTCCTATGCTCTCTCCCGATG
GTATTTTGCCTATTAAGAATAGAAAGTCCAATAAAATGAGAACTCGGGTGGATCTAAGTA
CGGAAGTGGGCACGAGAGAAAATAGTTCTTTGCACCATGAGAGCCCACCTATGTCCAATT
CCACTTTCCAGCAGTATGGCACTTCTCTCCCTTCTGATGACACTTCTTTCCCTTCTGATT
GTCAAGAGAAGGGAACGCCTTCTTATTCTAGAGAACTCCATCATGTTCAAAGTTGTGTAG
ATGACGAAGTTAGTAGTACAAATGCCAATCAGGATGACTCCAAGCTGCCCACTAGTCTTG
GGAAGAAGAGCATGCCTCCACATTTGAGACAGCGTGAATATGAAGACAGTACTAGGAAAG
ATGAGTCTGATAACTCTTATCTGCCTACTCAATTTGGGAAAAAGAGCACACCTCCTCACT
CCAGAAAGCCCCAGCGAGGCCAACCCTATCACAGGCATGATGTTGGTACTGGAAATTCTG
AATGCCCCAGAGGTTTGCAGAAGTTTGAACCATTTGATATCTGCAAGTCTGGCGTCATGC
ATCCTGTCAAGAAGTGCCTAATCCCTGAACAAAATGAAATAAAGCACTCCATGGAAGGGA
CTACACAAGAAGTGCTTAGACCTGGCATGGTTCTGTTAAAAGGTTACATCAGCCTCACTG
AACAGATCAAGATGGTAAAGAAATGTCGAGATCTTGGTGTAGGGCCAGGTGGCTTTTACA
GACCTGGTTATCAAGATGGAGCCAAACTTCGTTTGCAGATGATGTGCCTTGGTATGAATT
GGGATCCTCAAACAAGGAAATATGAAAAATGGCATCCACTTGATGGTTCTGAGACACCTG
ACATTCCCCATGAATTTAGTGTGCTGGTTGAAAGAGCGATACAAGATTCACAGTCCCTTA
TTAAAAAGAATAGTGGTGAGAACAATGTGGAAGACACACTCCCGAGGATGTCTCCAAATA
TATGCATTGTGAACTTCTATACGACCAGTGGGCGGCTTGGTCTCCATCAGGACCGTGATG
AAAGCGAAGAGAGCCTCCTTAAAGGATTACCCGTGGTCTCTTTCTCCCTTGGCGACTCAG
CAGAGTTCTTATATGGGAATCAAAGAAATGTAGATGCAGCAGGTAAAGTTGTATTGGAAT
CAGGAGATGTCCTAATATTTGGTGGTCCCTCAAGGCATATTTTTCATGGGGTGTCATCAA
TTATCCCTAACTCAGCTCCAAACTCCCTACTAGAAGAAACAAATCTTCTTCCTGGCCGTC
TAAACCTTACCCTCAGGCAGCTTTGATATGCTTTACCTTCAGACAATTTTCATACAGCCT
CATCACGAAAGAATGCATCACTGTCAAGTTTTGTCCTCGTATATTTTTCTTATTGCTGTT
GGTTTTGTGATTGAGTATGGCAATATTGTTTGATATTTTTGTTCTATTCCGAATGAAATT
TAGATTATTGGTCCCTTTTTTTTTTCCTTTTTGGGTGGGGGGTGTTCTTTCTAATAACTT
AAGATTATGGAACTTCTTGTATTCTCTCTTGAGGATTGTATTGT