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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0058g00680.t01
CDS Infomation

cds chromosome:12X:8:9794017:9795993:1 gene:VIT_08s0058g00680 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:F6GXS5]
Sequence

ATGACCACTCCCCACGATCCAGCCACCACAAAACACGCCGATTCGTCCCCAGCCACCCCT
CCTCCGACGGCTCCGCCGGTGCCCGACGTCGAGAACCAGACTGCGGCATCCACCCGGTTC
GGCGCTCCGGCAATTTTAAGGCGCTGGAAGAGGGAGGATTTTCTGAAGAGAGGCTCCATA
GGTTTGCGGGGATTGGCTTTGGTCTGTTCTCTTCTTTCTTTCGTCATCATGGTCAGCAAC
AAGCACGGCGATTGGAAAAACTTCGACAAATATGAAGAATTCAGGTATACGTTGGGGATA
GCCATTTTGTCGACTTTGTATACAGGAGGCCAAGTTTTGCGGCAAGTTCATGAACTATAC
ACCGGAAATCTCATGTTCTCGCGGTGGAGCACCTCCTTGTTCGACTTTATCGGGGATCAG
ATTGTGGCTTACTTACTGATATCTTCAGCATCAGCGGCGGTTCCCATGACAAACAGAATG
AGAGAGGGGGCAGATAATATATTCACTGATTCATTGGCTGCGGCCATTAGCATGTCATTC
CTTGCATTCTTTTCGCTTGGATTGTCAGCTCTCATTTCTGGATACAAGCTTTCCACTCAA
TCTTATATCTGA

Peptide Sequence

PEP ID

VIT_08s0058g00680.t01
PEP Infomation

pep chromosome:12X:8:9794017:9795993:1 gene:VIT_08s0058g00680 transcript:VIT_08s0058g00680.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:F6GXS5]
Sequence

MTTPHDPATTKHADSSPATPPPTAPPVPDVENQTAASTRFGAPAILRRWKREDFLKRGSI
GLRGLALVCSLLSFVIMVSNKHGDWKNFDKYEEFRYTLGIAILSTLYTGGQVLRQVHELY
TGNLMFSRWSTSLFDFIGDQIVAYLLISSASAAVPMTNRMREGADNIFTDSLAAAISMSF
LAFFSLGLSALISGYKLSTQSYI

Transcript Sequence

Transcript ID

VIT_08s0058g00680.t01
Transcript Infomation

cdna chromosome:12X:8:9794017:9795993:1 gene:VIT_08s0058g00680 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein [Source:UniProtKB/TrEMBL;Acc:F6GXS5]
Sequence

AGAAATTATTAAATCCATCGTGTAACCTCCGCGGACTCAATCTTCCGTCGTTAACGGGGC
TGAGTTGTCATTCAGAAGAACAAAATCCGATTCAAACTCTCGAAAGAATCATTCGCTTTC
ATTCTTCTTTCTCCGACCTTTCGATACTGCAGTCCCACAAACATGACCACTCCCCACGAT
CCAGCCACCACAAAACACGCCGATTCGTCCCCAGCCACCCCTCCTCCGACGGCTCCGCCG
GTGCCCGACGTCGAGAACCAGACTGCGGCATCCACCCGGTTCGGCGCTCCGGCAATTTTA
AGGCGCTGGAAGAGGGAGGATTTTCTGAAGAGAGGCTCCATAGGTTTGCGGGGATTGGCT
TTGGTCTGTTCTCTTCTTTCTTTCGTCATCATGGTCAGCAACAAGCACGGCGATTGGAAA
AACTTCGACAAATATGAAGAATTCAGGTATACGTTGGGGATAGCCATTTTGTCGACTTTG
TATACAGGAGGCCAAGTTTTGCGGCAAGTTCATGAACTATACACCGGAAATCTCATGTTC
TCGCGGTGGAGCACCTCCTTGTTCGACTTTATCGGGGATCAGATTGTGGCTTACTTACTG
ATATCTTCAGCATCAGCGGCGGTTCCCATGACAAACAGAATGAGAGAGGGGGCAGATAAT
ATATTCACTGATTCATTGGCTGCGGCCATTAGCATGTCATTCCTTGCATTCTTTTCGCTT
GGATTGTCAGCTCTCATTTCTGGATACAAGCTTTCCACTCAATCTTATATCTGATTTAAG
TTATTTTTTGTTAAACCATTCTTTATGTATTATTGAGTTGTTTGCCATGTACATGACACT
TTTGTGTGTATTGTCAATATGGAAGTGTATCCATGACACTTTTGTGTGTATTGTCAATAT
TGAAGTGTATCCATTCACTGTGTACTTCTATCAAATAAA