Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0058g00010.t01
CDS Infomation

cds chromosome:12X:8:8277837:8281079:1 gene:VIT_08s0058g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAATCCTACTCTTTTCATGGATTTTCTTCATGCCTCTATGCTCAAGCTTTTTTGGT
ATGCATGTTGCTTTGGTGTCCGGCGAGTGTCTGAGTGATGGGAGGGTATGCCTGGAAGAT
GAGATGTTGTTGTTGCTGCAACTGAAGAGCACCCTCAAATTCAATGCTGATGCATCTAAT
AAACTAGTTTCCTGGAATCAAAGCGCGGACTGCTGTTCTTGGGGCGGTGTAACCTGGGAT
GCCACTGGTCATGTTAGCTTGAATTTGGCTAACAACACCTTCTTCTCTTCTGAAATTCCA
TCTGGATTCGACAAGCTTGGTAATTTGACTTACCTCAATCTGTCTAAAGCTGGCTTTTCT
GGGCAGATTCCAATTGAGATTTCACGCTTGACAAGGTTGGTTACCATCGATATCTCTAGC
TTTAATGACCTCTTTGGAACCCCTGCACCGAAGCTTGAGCAGCCAAATCTGAGAATGCTG
GTTCAGAACCTCAAAGAGCTTAGAGAACTCCATCTTGATGGTGTAGACATATCAGCCCAG
GGGAAGGAGTGGTGTCAAGCATTATCATCTTCTGTACCTAATCTCCGAGTTCTGAGCTTG
TCCAGGTGTTTTCTTTCAGGCCCTATTGATTCTTCCCTGGTGAAGCTTCGCTCCCTGTCA
GTTGTTCATCTGAATTATAACAATTTCACAGCTCCAGTTCCTGATTTTTTGGCAAATTTC
TCAAATTTGACTTCCTTGAGCCTCAGTTTTTGCCGACTGTATGGAACATTTCCAGAAAAT
ATCTTTCAGGTACCAGCCCTGCAAATTCTTGACTTGTCTAACAATCATGGACCAATCCCC
AGCTCCATAGCAAATCTTACTCGATTGCTTTACTTGGACTTATCCTCAAATGGCTTTACC
GGTTCAATTCCATCCTTCCGCTTTTTGAATCTTTTAAATCTGGACTTGCACCAAAATTTA
CTACATGGGGATCTTCCGTTGTCCCTGTTCTCTCACCCATCACTGCAGAAGATACAGCTT
AACCAAAACCAATTTTCTGGGTCAATTCCCCTTTCTGTCTTTGATCTGCGGGCTCTTCGC
GTCCTTGAACTTTCTTTCAACAACGTCAGTGGCACCCTTGAACTAAGCAAATTTCAAGAA
CTAGGGAACCTTACTACTCTGAGTCTCTCCCACAACAAGTTGTCAATCAATGTGGATAAA
CCTTTCCCTAATCTTCCTCCTTATCTGTTTACCCTTGACCTACATTCCAACCTGCTCCGT
GGACGAATCCCCACTCCACCACAATTTTCCAGCTATGTGGATTACTCAAACAACAGCTTC
ATCTCTTCCATCCCTGAAGATATTGGCTCTTACATTTCCTACGTTATTTTCTTCTCTCTT
TCAAAGAATAATATCTCTGGAATAATTCCAGAATCAATCTGCAATGCAACTAACGTCCAA
GTTCTTGACTTGTCTGACAATGCTTTGAAGCTAGAGGTTTTAAACCTCGGGAATAATCGC
ATAGATGATAAGTTCCCTTGCTGGTTGAAGAACATGAGCAGTTTGCGTGTGCTTGTTCTG
CGAGCCAACAGATTCCATGGACCCATTGGATGTCCAAATAGCAATTCCACCTGGCCAATG
CTTCAAATCATCCTAGAATTCAGTGAATTGTATTATCAGGACGCTGTAACAGTCACCAGC
AAAGGTCAAGAAATGGAGCTTGTGAAGGTCCTAACTCTCTTCACTTCCATTGACTTCTCC
TCCAACAAATTTGAAGGCCAGATACCAGAAGAGATGGGAAACTTCATATCACTATATGTC
CTCAACTTATCTGGTAATGGTTTCACAGGCCAAATCCCATCATCAATGGGGCAGCTGAGA
CAGCTCGAGTCATTAGACCTCTCACGCAACCATCTGAGTGGGAAGATCCCCACAGAGCTT
GTGAGCCTAACTTTCCTTTCAGTCCTGGACCTCTCCTTCAATCAGTTAGTGGGGGCAATC
CCAAGCGGTAATCAATTTCAAACATTTTCAGAAGCTTCTTTCCAAGTGAACAAAGGATTG
TGTGGGCAACCTTTGAATGTAAATTGCGAAGAGGATACACCACCACCGACATTTGATGAC
AGGCACTCAGCTTCCCGTATGGAGATTAAGTGGGAATACATAGCTCCTGAAATTGGATTT
GTGACAGGATTGGGAATCGTGATTTGGCCTCTAGTGTTTTGCAGGAGATGGAGGCAATGC
TACTACAAACGTGTTGATAGAATTCTTTCAAGGATTCTCCATCACCAAGACCAAAGAGCA
AGTGGTGGAAGAAGAGCTCACAGAATTCGGAGGCGGAGAATGTAG

Peptide Sequence

PEP ID

VIT_08s0058g00010.t01
PEP Infomation

pep chromosome:12X:8:8277837:8281079:1 gene:VIT_08s0058g00010 transcript:VIT_08s0058g00010.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGILLFSWIFFMPLCSSFFGMHVALVSGECLSDGRVCLEDEMLLLLQLKSTLKFNADASN
KLVSWNQSADCCSWGGVTWDATGHVSLNLANNTFFSSEIPSGFDKLGNLTYLNLSKAGFS
GQIPIEISRLTRLVTIDISSFNDLFGTPAPKLEQPNLRMLVQNLKELRELHLDGVDISAQ
GKEWCQALSSSVPNLRVLSLSRCFLSGPIDSSLVKLRSLSVVHLNYNNFTAPVPDFLANF
SNLTSLSLSFCRLYGTFPENIFQVPALQILDLSNNHGPIPSSIANLTRLLYLDLSSNGFT
GSIPSFRFLNLLNLDLHQNLLHGDLPLSLFSHPSLQKIQLNQNQFSGSIPLSVFDLRALR
VLELSFNNVSGTLELSKFQELGNLTTLSLSHNKLSINVDKPFPNLPPYLFTLDLHSNLLR
GRIPTPPQFSSYVDYSNNSFISSIPEDIGSYISYVIFFSLSKNNISGIIPESICNATNVQ
VLDLSDNALKLEVLNLGNNRIDDKFPCWLKNMSSLRVLVLRANRFHGPIGCPNSNSTWPM
LQIILEFSELYYQDAVTVTSKGQEMELVKVLTLFTSIDFSSNKFEGQIPEEMGNFISLYV
LNLSGNGFTGQIPSSMGQLRQLESLDLSRNHLSGKIPTELVSLTFLSVLDLSFNQLVGAI
PSGNQFQTFSEASFQVNKGLCGQPLNVNCEEDTPPPTFDDRHSASRMEIKWEYIAPEIGF
VTGLGIVIWPLVFCRRWRQCYYKRVDRILSRILHHQDQRASGGRRAHRIRRRRM

Transcript Sequence

Transcript ID

VIT_08s0058g00010.t01
Transcript Infomation

cdna chromosome:12X:8:8277837:8281079:1 gene:VIT_08s0058g00010 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTGCTACCAATGGGAATCCTACTCTTTTCATGGATTTTCTTCATGCCTCTATGCTCAAGC
TTTTTTGGTATGCATGTTGCTTTGGTGTCCGGCGAGTGTCTGAGTGATGGGAGGGTATGC
CTGGAAGATGAGATGTTGTTGTTGCTGCAACTGAAGAGCACCCTCAAATTCAATGCTGAT
GCATCTAATAAACTAGTTTCCTGGAATCAAAGCGCGGACTGCTGTTCTTGGGGCGGTGTA
ACCTGGGATGCCACTGGTCATGTTAGCTTGAATTTGGCTAACAACACCTTCTTCTCTTCT
GAAATTCCATCTGGATTCGACAAGCTTGGTAATTTGACTTACCTCAATCTGTCTAAAGCT
GGCTTTTCTGGGCAGATTCCAATTGAGATTTCACGCTTGACAAGGTTGGTTACCATCGAT
ATCTCTAGCTTTAATGACCTCTTTGGAACCCCTGCACCGAAGCTTGAGCAGCCAAATCTG
AGAATGCTGGTTCAGAACCTCAAAGAGCTTAGAGAACTCCATCTTGATGGTGTAGACATA
TCAGCCCAGGGGAAGGAGTGGTGTCAAGCATTATCATCTTCTGTACCTAATCTCCGAGTT
CTGAGCTTGTCCAGGTGTTTTCTTTCAGGCCCTATTGATTCTTCCCTGGTGAAGCTTCGC
TCCCTGTCAGTTGTTCATCTGAATTATAACAATTTCACAGCTCCAGTTCCTGATTTTTTG
GCAAATTTCTCAAATTTGACTTCCTTGAGCCTCAGTTTTTGCCGACTGTATGGAACATTT
CCAGAAAATATCTTTCAGGTACCAGCCCTGCAAATTCTTGACTTGTCTAACAATCATGGA
CCAATCCCCAGCTCCATAGCAAATCTTACTCGATTGCTTTACTTGGACTTATCCTCAAAT
GGCTTTACCGGTTCAATTCCATCCTTCCGCTTTTTGAATCTTTTAAATCTGGACTTGCAC
CAAAATTTACTACATGGGGATCTTCCGTTGTCCCTGTTCTCTCACCCATCACTGCAGAAG
ATACAGCTTAACCAAAACCAATTTTCTGGGTCAATTCCCCTTTCTGTCTTTGATCTGCGG
GCTCTTCGCGTCCTTGAACTTTCTTTCAACAACGTCAGTGGCACCCTTGAACTAAGCAAA
TTTCAAGAACTAGGGAACCTTACTACTCTGAGTCTCTCCCACAACAAGTTGTCAATCAAT
GTGGATAAACCTTTCCCTAATCTTCCTCCTTATCTGTTTACCCTTGACCTACATTCCAAC
CTGCTCCGTGGACGAATCCCCACTCCACCACAATTTTCCAGCTATGTGGATTACTCAAAC
AACAGCTTCATCTCTTCCATCCCTGAAGATATTGGCTCTTACATTTCCTACGTTATTTTC
TTCTCTCTTTCAAAGAATAATATCTCTGGAATAATTCCAGAATCAATCTGCAATGCAACT
AACGTCCAAGTTCTTGACTTGTCTGACAATGCTTTGAAGCTAGAGGTTTTAAACCTCGGG
AATAATCGCATAGATGATAAGTTCCCTTGCTGGTTGAAGAACATGAGCAGTTTGCGTGTG
CTTGTTCTGCGAGCCAACAGATTCCATGGACCCATTGGATGTCCAAATAGCAATTCCACC
TGGCCAATGCTTCAAATCATCCTAGAATTCAGTGAATTGTATTATCAGGACGCTGTAACA
GTCACCAGCAAAGGTCAAGAAATGGAGCTTGTGAAGGTCCTAACTCTCTTCACTTCCATT
GACTTCTCCTCCAACAAATTTGAAGGCCAGATACCAGAAGAGATGGGAAACTTCATATCA
CTATATGTCCTCAACTTATCTGGTAATGGTTTCACAGGCCAAATCCCATCATCAATGGGG
CAGCTGAGACAGCTCGAGTCATTAGACCTCTCACGCAACCATCTGAGTGGGAAGATCCCC
ACAGAGCTTGTGAGCCTAACTTTCCTTTCAGTCCTGGACCTCTCCTTCAATCAGTTAGTG
GGGGCAATCCCAAGCGGTAATCAATTTCAAACATTTTCAGAAGCTTCTTTCCAAGTGAAC
AAAGGATTGTGTGGGCAACCTTTGAATGTAAATTGCGAAGAGGATACACCACCACCGACA
TTTGATGACAGGCACTCAGCTTCCCGTATGGAGATTAAGTGGGAATACATAGCTCCTGAA
ATTGGATTTGTGACAGGATTGGGAATCGTGATTTGGCCTCTAGTGTTTTGCAGGAGATGG
AGGCAATGCTACTACAAACGTGTTGATAGAATTCTTTCAAGGATTCTCCATCACCAAGAC
CAAAGAGCAAGTGGTGGAAGAAGAGCTCACAGAATTCGGAGGCGGAGAATGTAG