Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0056g01690.t01
CDS Infomation

cds chromosome:12X:8:2705810:2723689:1 gene:VIT_08s0056g01690 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCACGCCCTCTGCAATTTCCCGGAACTTGCCCCTCTCACTGTCCAATCCCCGCTCT
CCTCCAACCCTTGTCGCGTCTTGTCTTACTTCACTTTCAAATTTTCCCAGACTACCGCCT
CATGTCGCTTCCAATCAACAGTCCTACTTTCCAAAATTATCCGTACCCAGTAGAGTTGAT
GCACCTGCTTCCAAGTTTTTGCAGATGGGTCCTCATAAAAGTCGCCCCCTTCGAAGATTT
CAGGTGAAATCCATGGGGACTGATAGTGGGAGCACTCCCTTGGGCCTCCAAAGCGTCTTT
GGAGTGTTGCATTTAGTGGTTTCTCTTGGGATAATACTAGCAATGGACAAGCTTTTGAAG
AAGGCATTTGTGGCTGCTGCCATCAAATTCCCAAGTGCTCTGTTTGGGATGTTTTGTATA
TTCACCATTTTAGTTATTCTTGATTCTACTGTTCCAGCTGCAGCAAAAAGTTTGATAAAC
TTCTTCCAGCCAGCACTTCTGTTTATTCAGAGATGGCTTCCCTTGTTTTATGTTCCATCC
TTGGTTGTTTTGCCTCTTGCTGTTAAAGATATTCCTGCAGCTTCGGGTCTCAAGATTTGT
TTTATAATAGTTGGAGGCTGGCTTGCTTCACTTTCTGTTGCAGGTTATACAGCTATAGCT
GTAAGAAAAATCGTCAAGACAGAAATGATACCTGCTGAGCCCATGGAAAAACCTTCACCT
TTTACTTCCATTGAAGTGTGGACGTGGACTGGAATTTTCCTTATATCATTTGTTTCTGCT
CTTTTATATCCAACATTACTTGGAACAAATGCTAGAACATGCCTACCTTTCTTACTCGCA
TCTACTGTTTTAGGCTACGTGGTTGGTTCTGGGTTTCCATCTACTGTGAAGAAGGTGTTC
CATCCAATTATATGCTGTGCCCTATCTGCAGATCTGGCAGCCTTGGCTTTTGGATACTTT
TCCCAGTCCGGACTTTATCCTGTTCTAGGATATTACCTTACGAAGGCATCTTCTAATCCT
GGAGCTGGTGACATTCTAATGGGATTTTTAGGATCTGTTATTCTCTCATTTGCTTTCTCC
ATGTTCAAACAGAGAAAGCTTGTAAAGAGGCATGCAGCTGAGATTTTCACATCTATCATT
ATCTCAACAATATTCTCCTTGTATTCAACTGCTTTTATTGGACGCATTCTGGGGTTAGAA
CAAGATTTGACTGTATCAATTCTACCCAGATGCATAACTGTTGCGCTAGCCCTCAGCATT
GTGTCTCTGTTTGAAGGTGCCAATTCCTCTCTCACAGCTGCTGTGGTTGTACTAACTGGT
CTGGTTGGAGCTAATTTTGTGCAAGCAGTGCTTGATAAGCTAAAATTCCGAGATCCTATT
GCTCGAGGAATAGCAACTGCATCTAGTGCTCATGGACTGGGCACTGCGGCACTGTCAGCA
AAGGAACCGGAGGCTCTCCCATTTTGTGCCATTGCTTATGCTCTCACTGGAATTTTCGGC
TCACTCTTATGCTCAGTTCCAGCAGTCAGGCAAAGCCTGCTTGCAATTGTTGGGTGA

Peptide Sequence

PEP ID

VIT_08s0056g01690.t01
PEP Infomation

pep chromosome:12X:8:2705810:2723689:1 gene:VIT_08s0056g01690 transcript:VIT_08s0056g01690.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATPSAISRNLPLSLSNPRSPPTLVASCLTSLSNFPRLPPHVASNQQSYFPKLSVPSRVD
APASKFLQMGPHKSRPLRRFQVKSMGTDSGSTPLGLQSVFGVLHLVVSLGIILAMDKLLK
KAFVAAAIKFPSALFGMFCIFTILVILDSTVPAAAKSLINFFQPALLFIQRWLPLFYVPS
LVVLPLAVKDIPAASGLKICFIIVGGWLASLSVAGYTAIAVRKIVKTEMIPAEPMEKPSP
FTSIEVWTWTGIFLISFVSALLYPTLLGTNARTCLPFLLASTVLGYVVGSGFPSTVKKVF
HPIICCALSADLAALAFGYFSQSGLYPVLGYYLTKASSNPGAGDILMGFLGSVILSFAFS
MFKQRKLVKRHAAEIFTSIIISTIFSLYSTAFIGRILGLEQDLTVSILPRCITVALALSI
VSLFEGANSSLTAAVVVLTGLVGANFVQAVLDKLKFRDPIARGIATASSAHGLGTAALSA
KEPEALPFCAIAYALTGIFGSLLCSVPAVRQSLLAIVG

Transcript Sequence

Transcript ID

VIT_08s0056g01690.t01
Transcript Infomation

cdna chromosome:12X:8:2705810:2723689:1 gene:VIT_08s0056g01690 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACTCACTGCCCCTCTCTTTCCATGGCCACGCCCTCTGCAATTTCCCGGAACTTGCCCCT
CTCACTGTCCAATCCCCGCTCTCCTCCAACCCTTGTCGCGTCTTGTCTTACTTCACTTTC
AAATTTTCCCAGACTACCGCCTCATGTCGCTTCCAATCAACAGTCCTACTTTCCAAAATT
ATCCGTACCCAGTAGAGTTGATGCACCTGCTTCCAAGTTTTTGCAGATGGGTCCTCATAA
AAGTCGCCCCCTTCGAAGATTTCAGGTGAAATCCATGGGGACTGATAGTGGGAGCACTCC
CTTGGGCCTCCAAAGCGTCTTTGGAGTGTTGCATTTAGTGGTTTCTCTTGGGATAATACT
AGCAATGGACAAGCTTTTGAAGAAGGCATTTGTGGCTGCTGCCATCAAATTCCCAAGTGC
TCTGTTTGGGATGTTTTGTATATTCACCATTTTAGTTATTCTTGATTCTACTGTTCCAGC
TGCAGCAAAAAGTTTGATAAACTTCTTCCAGCCAGCACTTCTGTTTATTCAGAGATGGCT
TCCCTTGTTTTATGTTCCATCCTTGGTTGTTTTGCCTCTTGCTGTTAAAGATATTCCTGC
AGCTTCGGGTCTCAAGATTTGTTTTATAATAGTTGGAGGCTGGCTTGCTTCACTTTCTGT
TGCAGGTTATACAGCTATAGCTGTAAGAAAAATCGTCAAGACAGAAATGATACCTGCTGA
GCCCATGGAAAAACCTTCACCTTTTACTTCCATTGAAGTGTGGACGTGGACTGGAATTTT
CCTTATATCATTTGTTTCTGCTCTTTTATATCCAACATTACTTGGAACAAATGCTAGAAC
ATGCCTACCTTTCTTACTCGCATCTACTGTTTTAGGCTACGTGGTTGGTTCTGGGTTTCC
ATCTACTGTGAAGAAGGTGTTCCATCCAATTATATGCTGTGCCCTATCTGCAGATCTGGC
AGCCTTGGCTTTTGGATACTTTTCCCAGTCCGGACTTTATCCTGTTCTAGGATATTACCT
TACGAAGGCATCTTCTAATCCTGGAGCTGGTGACATTCTAATGGGATTTTTAGGATCTGT
TATTCTCTCATTTGCTTTCTCCATGTTCAAACAGAGAAAGCTTGTAAAGAGGCATGCAGC
TGAGATTTTCACATCTATCATTATCTCAACAATATTCTCCTTGTATTCAACTGCTTTTAT
TGGACGCATTCTGGGGTTAGAACAAGATTTGACTGTATCAATTCTACCCAGATGCATAAC
TGTTGCGCTAGCCCTCAGCATTGTGTCTCTGTTTGAAGGTGCCAATTCCTCTCTCACAGC
TGCTGTGGTTGTACTAACTGGTCTGGTTGGAGCTAATTTTGTGCAAGCAGTGCTTGATAA
GCTAAAATTCCGAGATCCTATTGCTCGAGGAATAGCAACTGCATCTAGTGCTCATGGACT
GGGCACTGCGGCACTGTCAGCAAAGGAACCGGAGGCTCTCCCATTTTGTGCCATTGCTTA
TGCTCTCACTGGAATTTTCGGCTCACTCTTATGCTCAGTTCCAGCAGTCAGGCAAAGCCT
GCTTGCAATTGTTGGGTGAAAATGTCA