Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0056g00830.t01
CDS Infomation

cds chromosome:12X:8:1298994:1300398:-1 gene:VIT_08s0056g00830 gene_biotype:protein_coding transcript_biotype:protein_coding description:Presenilin [Source:UniProtKB/TrEMBL;Acc:F6HMV3]
Sequence

ATGGATTCGAGCATTCTCGATTCTCTCGGAGTCGAAATCATTGGCGTGATGTCGCCGGTC
TCAGTCTGCATGCTCCTGGTGGTTCTCCTCGTTTACACCCTCTCCTCCGCCACCTCCTCG
GCCGCCTCCGACACCATCAGGACCGCCGCCAACCTCGTCTACCTCGAATCCCCCTCCGAC
TCCACCACCCAGAAGCTCGAGGGCGCATTGCTCAACGCTCTGGTCTTCATCGTCCTCATC
GCTATCGTCACGTTCGTCCTCGTCCTCCTCTACTACTACAATTTCACCAATTTCTTGAAG
AATTACATGCGGTTCTCCGCGTTTTTCGTGCTCGGCACCATGGGCGGATCCATCTTTTTG
TCGGTAATTCAGCATTTCTCAGTGCCGATTGATTCAATTACTTGTTTCTTGTTGCTGTTT
AACTTCACTGTCGTTGGGGTTTTATCGGTTTTTTCGAATGGTGTTCCGATTTTTGTGAGG
CAAGTGTATATGGTTGTTTTGGGGATTATTGTTGCAGCTTGGTTCACCAAGTTGCCCGAA
TGGACCACTTGGGTTCTGCTTGTGGCTTTGGCCGTGTATGATTTAGTGGCGGTTTTGGCG
CCGGGGGGGCCGCTGAAGCTGCTGGTTGAGTTGGCGTCGACCCGAGATGAAGAGCTTCCC
GCGCTGGTGTACGAGGCTCGGCCTGTGGTTTCGCGGGGTCCGGGGACTCGGGGTTCGGGG
ACCCGGGGTTCGAATTTGGGGCTTTTGGTGGGTGGAGTTTCAGAGTCAGGGAGTGTTGAG
CTGCAGGCGGTGTCTCAGGACAATCGGAATAAGAGTGATGAGGACGTTGGAAATTTAGCA
AATGAGGAAGGGGAGACATCGCCTTTGGTGCCTAATTTGCGGGATAGGCCAACATCAAGC
AGTGGAAGCTCTGAGTACTCAGTGGTGAATGTTAGATTGGACCGAGGAGCCCAGTTTGGC
AATAGGGAATCAGAGATTGTTGTTGATGAGGAAATGTCTCCTCTTGTTGATATGTTGGAG
TTTGGGGGCGATAGAGAACAAACAAGGGGGGAAATTCCTGAAGCATCTATGGGAACAAGT
CGAGGAATAAAACTTGGTCTCGGAGATTTTGTTTTCTATAGTGTTCTTGTGGGTAGAGCT
GCAATGTATGATCTCATGACCGTGTATGCTTGTTACCTTGCAATTATATCAGGACTTGGA
TGCACTCTTATTTTGTTGTCTGTATGCCACCGAGCTCTGCCTGCCCTCCCTATATCCATC
ACATTGGGTGTGGTATTTTATTTCTTAACTCGGTTACTGATGGAACCTTTTGTTGTTGGG
ACATCCTCAAATCTAATGATGTTTTAA

Peptide Sequence

PEP ID

VIT_08s0056g00830.t01
PEP Infomation

pep chromosome:12X:8:1298994:1300398:-1 gene:VIT_08s0056g00830 transcript:VIT_08s0056g00830.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Presenilin [Source:UniProtKB/TrEMBL;Acc:F6HMV3]
Sequence

MDSSILDSLGVEIIGVMSPVSVCMLLVVLLVYTLSSATSSAASDTIRTAANLVYLESPSD
STTQKLEGALLNALVFIVLIAIVTFVLVLLYYYNFTNFLKNYMRFSAFFVLGTMGGSIFL
SVIQHFSVPIDSITCFLLLFNFTVVGVLSVFSNGVPIFVRQVYMVVLGIIVAAWFTKLPE
WTTWVLLVALAVYDLVAVLAPGGPLKLLVELASTRDEELPALVYEARPVVSRGPGTRGSG
TRGSNLGLLVGGVSESGSVELQAVSQDNRNKSDEDVGNLANEEGETSPLVPNLRDRPTSS
SGSSEYSVVNVRLDRGAQFGNRESEIVVDEEMSPLVDMLEFGGDREQTRGEIPEASMGTS
RGIKLGLGDFVFYSVLVGRAAMYDLMTVYACYLAIISGLGCTLILLSVCHRALPALPISI
TLGVVFYFLTRLLMEPFVVGTSSNLMMF

Transcript Sequence

Transcript ID

VIT_08s0056g00830.t01
Transcript Infomation

cdna chromosome:12X:8:1298994:1300398:-1 gene:VIT_08s0056g00830 gene_biotype:protein_coding transcript_biotype:protein_coding description:Presenilin [Source:UniProtKB/TrEMBL;Acc:F6HMV3]
Sequence

CCATGGATTCGAGCATTCTCGATTCTCTCGGAGTCGAAATCATTGGCGTGATGTCGCCGG
TCTCAGTCTGCATGCTCCTGGTGGTTCTCCTCGTTTACACCCTCTCCTCCGCCACCTCCT
CGGCCGCCTCCGACACCATCAGGACCGCCGCCAACCTCGTCTACCTCGAATCCCCCTCCG
ACTCCACCACCCAGAAGCTCGAGGGCGCATTGCTCAACGCTCTGGTCTTCATCGTCCTCA
TCGCTATCGTCACGTTCGTCCTCGTCCTCCTCTACTACTACAATTTCACCAATTTCTTGA
AGAATTACATGCGGTTCTCCGCGTTTTTCGTGCTCGGCACCATGGGCGGATCCATCTTTT
TGTCGGTAATTCAGCATTTCTCAGTGCCGATTGATTCAATTACTTGTTTCTTGTTGCTGT
TTAACTTCACTGTCGTTGGGGTTTTATCGGTTTTTTCGAATGGTGTTCCGATTTTTGTGA
GGCAAGTGTATATGGTTGTTTTGGGGATTATTGTTGCAGCTTGGTTCACCAAGTTGCCCG
AATGGACCACTTGGGTTCTGCTTGTGGCTTTGGCCGTGTATGATTTAGTGGCGGTTTTGG
CGCCGGGGGGGCCGCTGAAGCTGCTGGTTGAGTTGGCGTCGACCCGAGATGAAGAGCTTC
CCGCGCTGGTGTACGAGGCTCGGCCTGTGGTTTCGCGGGGTCCGGGGACTCGGGGTTCGG
GGACCCGGGGTTCGAATTTGGGGCTTTTGGTGGGTGGAGTTTCAGAGTCAGGGAGTGTTG
AGCTGCAGGCGGTGTCTCAGGACAATCGGAATAAGAGTGATGAGGACGTTGGAAATTTAG
CAAATGAGGAAGGGGAGACATCGCCTTTGGTGCCTAATTTGCGGGATAGGCCAACATCAA
GCAGTGGAAGCTCTGAGTACTCAGTGGTGAATGTTAGATTGGACCGAGGAGCCCAGTTTG
GCAATAGGGAATCAGAGATTGTTGTTGATGAGGAAATGTCTCCTCTTGTTGATATGTTGG
AGTTTGGGGGCGATAGAGAACAAACAAGGGGGGAAATTCCTGAAGCATCTATGGGAACAA
GTCGAGGAATAAAACTTGGTCTCGGAGATTTTGTTTTCTATAGTGTTCTTGTGGGTAGAG
CTGCAATGTATGATCTCATGACCGTGTATGCTTGTTACCTTGCAATTATATCAGGACTTG
GATGCACTCTTATTTTGTTGTCTGTATGCCACCGAGCTCTGCCTGCCCTCCCTATATCCA
TCACATTGGGTGTGGTATTTTATTTCTTAACTCGGTTACTGATGGAACCTTTTGTTGTTG
GGACATCCTCAAATCTAATGATGTTTTAACTTTATATCATTCATCAGAGGGAACTACACC
ATTAACAGAACTTCCTGTTGTTTTT