Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0056g00810.t01
CDS Infomation

cds chromosome:12X:8:1274224:1282429:-1 gene:VIT_08s0056g00810 gene_biotype:protein_coding transcript_biotype:protein_coding description:GrpE protein homolog [Source:UniProtKB/TrEMBL;Acc:F6HMV2]
Sequence

ATGGCAACTCTCCTGAGAGCTCCATTCACAGCACCGCCACCACAAAGCCTCACCTCTATC
TGCACGCAATCCCCTAAAGCCTTTCACCTCCCTCTCACTCGCAGATGCGCTCTTAATGCT
TCTCGCTTGACCTCTTCTCTCCGCTTCTCCCCCATACTGCACATCCGCTTCCTGCGGTTC
GATCCCTTCGCTTCTAACGGCGAGGCCACCGAGACTCAAGAGGTTCAAGACTCGGAGATC
GAGGAAAATTCAGATGGCTACATTGGTGGTGCAGAAGATGCCACAAGCGATTCAGATGCT
CCAGATTCAGATGCTCCCAATGCAGAGGAAGAACCTGCTTCAGGCATTATAGTGGCTCTA
CGATCATACAAAGAAGCTTTAGTGAGCAATGATGAATCCAAAGCAGCTGAGATAGAAGCT
TTTATTAAGTTCATTGAAGATGAGAAAATTGATCTTGAAAAAAAAGTGGCAGCCTTGTCT
GAGGAGCTCTCATCAGATAAGGAACGGATTCTCAGAATTAGTGCGGACTTTGACAATTTC
CGGAAGAGGACAGATAGAGAGCGACTTTCACTTGTAACAAATGCACAAGGGGAAGTCTTG
GAGAATCTGTTGCCTGTTTTGGATAACTTTGAGAGAGCTAAAGCCCAAATTAAGGTGGAG
ACTGAAGGAGAGGAGAAGATCAATAACAGCTATCAGAGTATATACAAGCAGTTTGTGGAG
ATTCTAGGCTCACTTGGCGTTACTCCTGTGGAGACAATCGGGAACCCCTTCGATCCATTG
TTCCATGAAGCAATTATGCGGGAGGATTCCACAGAGTTTGAAGAAGATGTGATAATTCAG
GAGTTCCGCAAGGGGTTCAAGCTTGGGGACAGACTCTTGCGCCCGTCAATGGTGAAAGTA
TCAGCAGGTCCAGGGCCTGCCAAAGCCGAAGCAGTTGGGTCATCAGAAGAAGAAGCTGTA
AGGGTGACTGAAACCGAAACCAGTGGGGAGGGCACCCCAGAAGGAGAGTCTGGTTGA

Peptide Sequence

PEP ID

VIT_08s0056g00810.t01
PEP Infomation

pep chromosome:12X:8:1274224:1282429:-1 gene:VIT_08s0056g00810 transcript:VIT_08s0056g00810.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:GrpE protein homolog [Source:UniProtKB/TrEMBL;Acc:F6HMV2]
Sequence

MATLLRAPFTAPPPQSLTSICTQSPKAFHLPLTRRCALNASRLTSSLRFSPILHIRFLRF
DPFASNGEATETQEVQDSEIEENSDGYIGGAEDATSDSDAPDSDAPNAEEEPASGIIVAL
RSYKEALVSNDESKAAEIEAFIKFIEDEKIDLEKKVAALSEELSSDKERILRISADFDNF
RKRTDRERLSLVTNAQGEVLENLLPVLDNFERAKAQIKVETEGEEKINNSYQSIYKQFVE
ILGSLGVTPVETIGNPFDPLFHEAIMREDSTEFEEDVIIQEFRKGFKLGDRLLRPSMVKV
SAGPGPAKAEAVGSSEEEAVRVTETETSGEGTPEGESG

Transcript Sequence

Transcript ID

VIT_08s0056g00810.t01
Transcript Infomation

cdna chromosome:12X:8:1274224:1282429:-1 gene:VIT_08s0056g00810 gene_biotype:protein_coding transcript_biotype:protein_coding description:GrpE protein homolog [Source:UniProtKB/TrEMBL;Acc:F6HMV2]
Sequence

TTCCAAATGGCAACTCTCCTGAGAGCTCCATTCACAGCACCGCCACCACAAAGCCTCACC
TCTATCTGCACGCAATCCCCTAAAGCCTTTCACCTCCCTCTCACTCGCAGATGCGCTCTT
AATGCTTCTCGCTTGACCTCTTCTCTCCGCTTCTCCCCCATACTGCACATCCGCTTCCTG
CGGTTCGATCCCTTCGCTTCTAACGGCGAGGCCACCGAGACTCAAGAGGTTCAAGACTCG
GAGATCGAGGAAAATTCAGATGGCTACATTGGTGGTGCAGAAGATGCCACAAGCGATTCA
GATGCTCCAGATTCAGATGCTCCCAATGCAGAGGAAGAACCTGCTTCAGGCATTATAGTG
GCTCTACGATCATACAAAGAAGCTTTAGTGAGCAATGATGAATCCAAAGCAGCTGAGATA
GAAGCTTTTATTAAGTTCATTGAAGATGAGAAAATTGATCTTGAAAAAAAAGTGGCAGCC
TTGTCTGAGGAGCTCTCATCAGATAAGGAACGGATTCTCAGAATTAGTGCGGACTTTGAC
AATTTCCGGAAGAGGACAGATAGAGAGCGACTTTCACTTGTAACAAATGCACAAGGGGAA
GTCTTGGAGAATCTGTTGCCTGTTTTGGATAACTTTGAGAGAGCTAAAGCCCAAATTAAG
GTGGAGACTGAAGGAGAGGAGAAGATCAATAACAGCTATCAGAGTATATACAAGCAGTTT
GTGGAGATTCTAGGCTCACTTGGCGTTACTCCTGTGGAGACAATCGGGAACCCCTTCGAT
CCATTGTTCCATGAAGCAATTATGCGGGAGGATTCCACAGAGTTTGAAGAAGATGTGATA
ATTCAGGAGTTCCGCAAGGGGTTCAAGCTTGGGGACAGACTCTTGCGCCCGTCAATGGTG
AAAGTATCAGCAGGTCCAGGGCCTGCCAAAGCCGAAGCAGTTGGGTCATCAGAAGAAGAA
GCTGTAAGGGTGACTGAAACCGAAACCAGTGGGGAGGGCACCCCAGAAGGAGAGTCTGGT
TGAAGACTAAACCCTCAATTCTAGATTGAAGTTTTGTAAAAGCAGCAGGTATCTTACTAC
TACAATTCAGGAGTCATTTTGGTGTTTTGGCCCTATGGGATGAAAATATGTACTATTTAT
TTGTCTTGGTTGATGGTGTGGAGGAATGGAAGAAATGAGTTGTACTTGCCAGCATAGGTG
CTTTGGGAAAAATGGGAGGAACATTAGTTGGACATTTGCATTGTCTAGGTGCCGGTTGCT
TAAGAAACTCCTAAGTCCGGG