Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0056g00290.t01
CDS Infomation

cds chromosome:12X:8:414952:415829:1 gene:VIT_08s0056g00290 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium binding [Source:UniProtKB/TrEMBL;Acc:C5DB59]
Sequence

ATGGAATCAGGTGGAGCCGGTCGGAGAAGCTTAAGCATCAACAACCGGTCATTCCGGCTC
CGCTGCCCCAGCCTCAACTCCGTCCGCCTCCGCCGCATCTTCGACCTATTTGACAAGAAC
TCCGACGGCACCATCACCGTCACGGAGCTCAGCCAGGCCCTCGCCCTCCTGGGCCTCGAC
GCCGACCTCCCCGACCTCCAGTCCATCGTCCAGTCACACATCAAGCCCGGCAACCTCGGC
CTCGAATTCGATGACTTCGCGGCCCTCCACCTCTCCCTGAACGACACCTACTTCTTCGAC
GTCGAAGAAGAGTTAAAAGGAGACGGCGCCGAGCAGTCGGAGCTGTCGCAGGAGGAGTCT
GACCTAAACGAGGCCTTTAAAGTGTTCGACGAAGACGGCGACGGATACATCTCGGCGCAG
GAGTTGCAGGTGGTGCTGGGGAAATTAGGGCTAGCGGAGGGGAAGGAAATAGGGAGAGTG
AAGCAGATGATAACATCAGTGGACAGAAACCAGGACGGGCGCGTGGATTTCTTTGAATTC
AAGGACATGATGCGAAGCGTAGTTGTTCGGAGCTCTTGA

Peptide Sequence

PEP ID

VIT_08s0056g00290.t01
PEP Infomation

pep chromosome:12X:8:414952:415829:1 gene:VIT_08s0056g00290 transcript:VIT_08s0056g00290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium binding [Source:UniProtKB/TrEMBL;Acc:C5DB59]
Sequence

MESGGAGRRSLSINNRSFRLRCPSLNSVRLRRIFDLFDKNSDGTITVTELSQALALLGLD
ADLPDLQSIVQSHIKPGNLGLEFDDFAALHLSLNDTYFFDVEEELKGDGAEQSELSQEES
DLNEAFKVFDEDGDGYISAQELQVVLGKLGLAEGKEIGRVKQMITSVDRNQDGRVDFFEF
KDMMRSVVVRSS

Transcript Sequence

Transcript ID

VIT_08s0056g00290.t01
Transcript Infomation

cdna chromosome:12X:8:414952:415829:1 gene:VIT_08s0056g00290 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium binding [Source:UniProtKB/TrEMBL;Acc:C5DB59]
Sequence

AGATTCCGAGCCACGCTCCCCTTTTTCCATCGTTGTAGTGTCACGGACTTGGGTATTTCC
AAATCGCCAGTTCGCCACTCAGATAATAAAAAGAACAATGGAATCAGGTGGAGCCGGTCG
GAGAAGCTTAAGCATCAACAACCGGTCATTCCGGCTCCGCTGCCCCAGCCTCAACTCCGT
CCGCCTCCGCCGCATCTTCGACCTATTTGACAAGAACTCCGACGGCACCATCACCGTCAC
GGAGCTCAGCCAGGCCCTCGCCCTCCTGGGCCTCGACGCCGACCTCCCCGACCTCCAGTC
CATCGTCCAGTCACACATCAAGCCCGGCAACCTCGGCCTCGAATTCGATGACTTCGCGGC
CCTCCACCTCTCCCTGAACGACACCTACTTCTTCGACGTCGAAGAAGAGTTAAAAGGAGA
CGGCGCCGAGCAGTCGGAGCTGTCGCAGGAGGAGTCTGACCTAAACGAGGCCTTTAAAGT
GTTCGACGAAGACGGCGACGGATACATCTCGGCGCAGGAGTTGCAGGTGGTGCTGGGGAA
ATTAGGGCTAGCGGAGGGGAAGGAAATAGGGAGAGTGAAGCAGATGATAACATCAGTGGA
CAGAAACCAGGACGGGCGCGTGGATTTCTTTGAATTCAAGGACATGATGCGAAGCGTAGT
TGTTCGGAGCTCTTGATGATGATCTTCTTCTCCAGCTTGAAAAAATGCGTAGCTTTTTTT
GTTTTGATTTTTGTGGATGTTTTATGAAAATTGGGGATGATACACTCGTACATACTGGGT
GTGTCGTGTGTGTACATACTCCTGCTGTATGTGTACGTGCACTTTGGGTTTTTTAAACTT
ATTTTACAAAGATTAAACTGTAATTTTACTTACATCAA