Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0040g03320.t01
CDS Infomation

cds chromosome:12X:8:14283636:14292636:-1 gene:VIT_08s0040g03320 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arginine biosynthesis bifunctional protein ArgJ, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TQ89]
Sequence

ATGTTTCTGTGCGTTCCTCATTACACCTCGATCACATTTCCTCAACTTAACGATGGCAGA
AAGGTCTTGAGGTTTGGTTCTTATCAACGGAGGGGTTTTAGGATATTGGCAATGTCGTCG
AGTGTGAGTGAGGCTTCAAATTACATAACAGCGGCTCCAATATTTCTTCCTGATGGACCT
TGGAAGCAGATTCCTGGGGGAGTTACTGCTGCAAAGGGATTCAAAGCTGCAGGCTTGTAT
GGTGGGCTACGGGCAAAAGGAGAGAAGCCTGATCTTGCACTAGTTGCTTGTGATGTAGAT
GCCATATCTGCAGGAGCATTTACTACAAATGTGGTTGCAGCTGCGCCAGTGGTATACTGC
AAAAATGCATTGGATATGTCAAAAACAGCGCGTGCAGTGTTAATAAATGCTGGTCAAGCC
AATGCAGCAACGGGTGATGCAGGTTACCAGGATGTGATAGAATGTGCAAATGCCCTGGCT
AAGCTACTGCAAATGAGGCCAGAGGAAGTGTTGATCGAATCTACTGGTGTTATTGGTCAT
AGAATAAAGAAGGACGCTCTTCTCAATTCCCTTCCAAAGCTTGTTAGTTCACTATCATCG
TCAACTGAGGGGGCAGATTCTGCAGCAGTAGCTATTACCACAACCGACTTAGTGAGCAAG
AGTGTGGCAATTGAATCTGAGGTTGGAGGGACAAATATTAGAGTTGGGGGAATGGCAAAG
GGTTCTGGGATGATCCATCCAAATATGGCTACCATGCTTGGTGTCGTAACAACTGATGCC
TTGGTTGCAAGTGATGTTTGGAGAAAGATGGTGCAGATTGCTGTAAACCGGAGTTTCAAC
CAAATTACTGTAGATGGAGATACTAGTACCAATGATACTGTCATTGCTTTAGCGAGTGGG
CTATCTGGGTCAACCAGGATATCATCTTTGATCAGTCACGAGGCAATACAACTTCAAGCA
TGCCTTGATGCAGTAATGCAGGGTCTTGCAAAATCAATAGCATGGGATGGAGAAGGAGCA
ACATGCCTAATTGAGGTCTCAGTAAATGGTGCAGAAAATGAGGCTGATGCAGCAAAGGTT
GCACGATCAGTGGCATCTTCTTCACTTGCTAAGGCTGCAGTGTACGGTCGAGATCCAAAT
TGGGGGCGCATTGCTTGTGCTGCTGGCTATGCAGGGATCCCTTTCCAACCCAACAAGCTC
CATATATCACTTGGAGAAATTCTGCTTATGGAGGGTGGACAACCGCTTCCATTTGACAGG
GCTGCGGCTAGTAATTATCTCAAGAAGGCTGGTGAGACCCATGGTACGGTTGGAATTCAC
ATCTCTATTGGTGATGGGGCAGGGCGGGGGCAGGCATGGGGATGTGATTTAAGTTATGAC
TACGTGAAGATAAATGCCGAGTACACGACATAG

Peptide Sequence

PEP ID

VIT_08s0040g03320.t01
PEP Infomation

pep chromosome:12X:8:14283636:14292636:-1 gene:VIT_08s0040g03320 transcript:VIT_08s0040g03320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arginine biosynthesis bifunctional protein ArgJ, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TQ89]
Sequence

MFLCVPHYTSITFPQLNDGRKVLRFGSYQRRGFRILAMSSSVSEASNYITAAPIFLPDGP
WKQIPGGVTAAKGFKAAGLYGGLRAKGEKPDLALVACDVDAISAGAFTTNVVAAAPVVYC
KNALDMSKTARAVLINAGQANAATGDAGYQDVIECANALAKLLQMRPEEVLIESTGVIGH
RIKKDALLNSLPKLVSSLSSSTEGADSAAVAITTTDLVSKSVAIESEVGGTNIRVGGMAK
GSGMIHPNMATMLGVVTTDALVASDVWRKMVQIAVNRSFNQITVDGDTSTNDTVIALASG
LSGSTRISSLISHEAIQLQACLDAVMQGLAKSIAWDGEGATCLIEVSVNGAENEADAAKV
ARSVASSSLAKAAVYGRDPNWGRIACAAGYAGIPFQPNKLHISLGEILLMEGGQPLPFDR
AAASNYLKKAGETHGTVGIHISIGDGAGRGQAWGCDLSYDYVKINAEYTT

Transcript Sequence

Transcript ID

VIT_08s0040g03320.t01
Transcript Infomation

cdna chromosome:12X:8:14283636:14292636:-1 gene:VIT_08s0040g03320 gene_biotype:protein_coding transcript_biotype:protein_coding description:Arginine biosynthesis bifunctional protein ArgJ, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TQ89]
Sequence

CACTGTCAAATACGCCGCACAAACTCCTCTCTTCCACACTGCCTCACAGTCACTCTCCTT
TCAAGTTTCAACAGAAAACCCTATAAAATCGCCATTCAGGAAAACCTGTTCAAACCTGCC
GTATTATCCATTTTCATCCATTTTTTCTAGAAGCCAAACGAGCTTCAAGATAGTCTGCAG
ACATGTTTCTGTGCGTTCCTCATTACACCTCGATCACATTTCCTCAACTTAACGATGGCA
GAAAGGTCTTGAGGTTTGGTTCTTATCAACGGAGGGGTTTTAGGATATTGGCAATGTCGT
CGAGTGTGAGTGAGGCTTCAAATTACATAACAGCGGCTCCAATATTTCTTCCTGATGGAC
CTTGGAAGCAGATTCCTGGGGGAGTTACTGCTGCAAAGGGATTCAAAGCTGCAGGCTTGT
ATGGTGGGCTACGGGCAAAAGGAGAGAAGCCTGATCTTGCACTAGTTGCTTGTGATGTAG
ATGCCATATCTGCAGGAGCATTTACTACAAATGTGGTTGCAGCTGCGCCAGTGGTATACT
GCAAAAATGCATTGGATATGTCAAAAACAGCGCGTGCAGTGTTAATAAATGCTGGTCAAG
CCAATGCAGCAACGGGTGATGCAGGTTACCAGGATGTGATAGAATGTGCAAATGCCCTGG
CTAAGCTACTGCAAATGAGGCCAGAGGAAGTGTTGATCGAATCTACTGGTGTTATTGGTC
ATAGAATAAAGAAGGACGCTCTTCTCAATTCCCTTCCAAAGCTTGTTAGTTCACTATCAT
CGTCAACTGAGGGGGCAGATTCTGCAGCAGTAGCTATTACCACAACCGACTTAGTGAGCA
AGAGTGTGGCAATTGAATCTGAGGTTGGAGGGACAAATATTAGAGTTGGGGGAATGGCAA
AGGGTTCTGGGATGATCCATCCAAATATGGCTACCATGCTTGGTGTCGTAACAACTGATG
CCTTGGTTGCAAGTGATGTTTGGAGAAAGATGGTGCAGATTGCTGTAAACCGGAGTTTCA
ACCAAATTACTGTAGATGGAGATACTAGTACCAATGATACTGTCATTGCTTTAGCGAGTG
GGCTATCTGGGTCAACCAGGATATCATCTTTGATCAGTCACGAGGCAATACAACTTCAAG
CATGCCTTGATGCAGTAATGCAGGGTCTTGCAAAATCAATAGCATGGGATGGAGAAGGAG
CAACATGCCTAATTGAGGTCTCAGTAAATGGTGCAGAAAATGAGGCTGATGCAGCAAAGG
TTGCACGATCAGTGGCATCTTCTTCACTTGCTAAGGCTGCAGTGTACGGTCGAGATCCAA
ATTGGGGGCGCATTGCTTGTGCTGCTGGCTATGCAGGGATCCCTTTCCAACCCAACAAGC
TCCATATATCACTTGGAGAAATTCTGCTTATGGAGGGTGGACAACCGCTTCCATTTGACA
GGGCTGCGGCTAGTAATTATCTCAAGAAGGCTGGTGAGACCCATGGTACGGTTGGAATTC
ACATCTCTATTGGTGATGGGGCAGGGCGGGGGCAGGCATGGGGATGTGATTTAAGTTATG
ACTACGTGAAGATAAATGCCGAGTACACGACATAGAATGATTTTTCCCTCTATATCAAAT
TCTCTTGTTGCTACTTTTTCAGTTATTTATGCATCAGCGTCAAGACTGTCCTTGAAAAAT
CAATATGATAATCCTGCAGTACGCTACTTTTTAACTTTCGCTGCAGTATTTCAAAAAATG
TAACACTAATTCTAATAGACGTATGGACAAAGGATTCGACTTGGGG