Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0040g02670.t01
CDS Infomation

cds chromosome:12X:8:13690921:13692930:1 gene:VIT_08s0040g02670 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTCTCTTGCTAAGCTCCACCAGCGCCAACAGCCACTCCACCTCTCTCTCTATGAC
CACCGCCCTTCATTTTCTAGACCAATTTCTTCATTTTCTTTCAGAACTTCTTCTTCATCT
TCAACCTCCAAATCACTCTTCGTCAGAGCATCCTCCTCCCCTTCATCATTTTCGCGTCAC
TCGCCTACTCAAGACCACCAAAATCCTAAATCCCCATTCTTCGAAACCCTATTACCCCAC
TTCTTCAAAGCCTCCTGCATCGCCATAGCCGCCGCTGCCGTCTTCTTCGCGCGATTCAAC
GTTAAACCTGTCATCGCCGCACCGGCTGCAACGGTGGAGCCTTTCAAACAATCCACGATG
GACAGCGTTTCGGATGAAGAGAAAGAAAGGACAGTCGAAGAGTACGTCGAGTCTCACCCA
GATGACGTCGAAGGGCTCAAGTCCCTCATGGAAGTCAAGATCAAGAATCGAAAGCTTCAA
GAAGCGGTAGATGTTATTGAACGTTTGATTCAACTTGAACCCGACGACAAGGAATGGCCA
TTGTTGAAAGCCCATCTCTATAGCTACTCCGGAGAGTCTGAATTGGCAAAATTAGGGTTC
GAAGAGATACTCTCTGCAAACCCTCTTACCGTGGAAGCTTATCATGGTCTAGTAATGGCG
GTTTCACAATCCGATTCTGGCGATGAATTGAATCAGGTTCTGAAGAGAATTGAGGCGGCA
ATGGAGAGGTGCAAGAAAGAGAAGAAGAAGGAGGATTTGAGGGATTTTAAGCTTTTGGTG
GCTCAAATTAGGGTAATTGAGGGGAAATACAATGATGCATTGAAGGTTTATCAGGAGCTT
GTGAAGGAGGAGCCTAGGGATTTCCGTCCATATCTATGTCAGGGGATTATATATACTTTG
TTGAGGAAGAAAGATGAGGCAGAGAAACAGTTTCAGAAGTATAGGAGGCTGGTTCCGAAG
GGGCACCCTTATGCCCGGTATTTTGATGATAATATGATTGCAACGAGGATGGAGGGCTAT
CAATCTAGTTTGGATGGAAGTGATAGCAATTTTAATTTCAATGATGACTATGATGATGAC
GCCTAA

Peptide Sequence

PEP ID

VIT_08s0040g02670.t01
PEP Infomation

pep chromosome:12X:8:13690921:13692930:1 gene:VIT_08s0040g02670 transcript:VIT_08s0040g02670.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MESLAKLHQRQQPLHLSLYDHRPSFSRPISSFSFRTSSSSSTSKSLFVRASSSPSSFSRH
SPTQDHQNPKSPFFETLLPHFFKASCIAIAAAAVFFARFNVKPVIAAPAATVEPFKQSTM
DSVSDEEKERTVEEYVESHPDDVEGLKSLMEVKIKNRKLQEAVDVIERLIQLEPDDKEWP
LLKAHLYSYSGESELAKLGFEEILSANPLTVEAYHGLVMAVSQSDSGDELNQVLKRIEAA
MERCKKEKKKEDLRDFKLLVAQIRVIEGKYNDALKVYQELVKEEPRDFRPYLCQGIIYTL
LRKKDEAEKQFQKYRRLVPKGHPYARYFDDNMIATRMEGYQSSLDGSDSNFNFNDDYDDD
A

Transcript Sequence

Transcript ID

VIT_08s0040g02670.t01
Transcript Infomation

cdna chromosome:12X:8:13690921:13692930:1 gene:VIT_08s0040g02670 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTCGTCGCCTTCTATCATCATCAGGGTTTAAGAATTCTCCTCTCGTTCTCTCCCTCTACT
GAAACATGGAGTCTCTTGCTAAGCTCCACCAGCGCCAACAGCCACTCCACCTCTCTCTCT
ATGACCACCGCCCTTCATTTTCTAGACCAATTTCTTCATTTTCTTTCAGAACTTCTTCTT
CATCTTCAACCTCCAAATCACTCTTCGTCAGAGCATCCTCCTCCCCTTCATCATTTTCGC
GTCACTCGCCTACTCAAGACCACCAAAATCCTAAATCCCCATTCTTCGAAACCCTATTAC
CCCACTTCTTCAAAGCCTCCTGCATCGCCATAGCCGCCGCTGCCGTCTTCTTCGCGCGAT
TCAACGTTAAACCTGTCATCGCCGCACCGGCTGCAACGGTGGAGCCTTTCAAACAATCCA
CGATGGACAGCGTTTCGGATGAAGAGAAAGAAAGGACAGTCGAAGAGTACGTCGAGTCTC
ACCCAGATGACGTCGAAGGGCTCAAGTCCCTCATGGAAGTCAAGATCAAGAATCGAAAGC
TTCAAGAAGCGGTAGATGTTATTGAACGTTTGATTCAACTTGAACCCGACGACAAGGAAT
GGCCATTGTTGAAAGCCCATCTCTATAGCTACTCCGGAGAGTCTGAATTGGCAAAATTAG
GGTTCGAAGAGATACTCTCTGCAAACCCTCTTACCGTGGAAGCTTATCATGGTCTAGTAA
TGGCGGTTTCACAATCCGATTCTGGCGATGAATTGAATCAGGTTCTGAAGAGAATTGAGG
CGGCAATGGAGAGGTGCAAGAAAGAGAAGAAGAAGGAGGATTTGAGGGATTTTAAGCTTT
TGGTGGCTCAAATTAGGGTAATTGAGGGGAAATACAATGATGCATTGAAGGTTTATCAGG
AGCTTGTGAAGGAGGAGCCTAGGGATTTCCGTCCATATCTATGTCAGGGGATTATATATA
CTTTGTTGAGGAAGAAAGATGAGGCAGAGAAACAGTTTCAGAAGTATAGGAGGCTGGTTC
CGAAGGGGCACCCTTATGCCCGGTATTTTGATGATAATATGATTGCAACGAGGATGGAGG
GCTATCAATCTAGTTTGGATGGAAGTGATAGCAATTTTAATTTCAATGATGACTATGATG
ATGACGCCTAA