Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0040g02410.t01
CDS Infomation

cds chromosome:12X:8:13481632:13491849:1 gene:VIT_08s0040g02410 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease P protein subunit p29 [Source:UniProtKB/TrEMBL;Acc:D7TQH0]
Sequence

ATGGCGACCGGAACAATTCTTGAAGATCAAAAGAAACGCACTTTGGAAGCGTTGGAGCGA
AGGTTTGCCGTTGCCAAGGCTGAGCTTCTACAACAGCAGGAACATCTAAGCAAGAAACGA
TTTCGCGGAGTAGATGAAAAAGTTAGTCCCTGCACAAATTCTTTCTCCGTTGGTTCTTCA
ACTCATCCGACTGACTCATCGGTTACGCCCACATTGAACGCCTCATTGAAGAAAGGTCAT
GCAACTTCACAAGATGTGGAAGCAAATGGTCCAGCGTATTCTCAGCTCTCTCAAACCGTT
CATGAGAATTTGTTGGCTACAAATGCAAAAATCACTAGTAAAAGAGGAAGCACAGCGGAT
AAAATTTTGCATGACCTTCTCAAAAATGGCGATTCAGCTCATAAATACATGATGGGATCC
AGAAGTATGAAATTTGACAATTGGATCCTTCTTGATAATGTTGTACAAGGACGTGGTGCT
TCAGGTGCTCGTATCAGGGATTTGCTGAGCCACTCGAAGAACTCCAGAAAACACATATCC
ATGAAGCAAAATAAAAGATGTGGATCATTGAATTTGCCTCAAGAGCTCCATAGGTATGAT
ATTTTCAAGCCGATGCATGACATGTGGAAAGGCTACATGATGCAACTTCTTAAAAATACT
GGGAAAAATCAGTTGGTTCAGCCTCTTCTCAGTGCAGACCTACATGGTGCTATTATTCTA
GTTGTTGAGTGTAAGATAGCTGCCTTCAATGGAGTGAGTGGTATCATGATTCGTGAAACT
GCAGAAACACTTGGTATAATTACACAAGATGATAAATTCCGAGTTGTGCCCAAAAAGGGG
TCTGTGTTTATTTTCCAAGCAGATTGCTGGAAAGTCACCTTGCAGGGAGACAAACTCACT
TCAAGAAATTTAGCCCTGTGA

Peptide Sequence

PEP ID

VIT_08s0040g02410.t01
PEP Infomation

pep chromosome:12X:8:13481632:13491849:1 gene:VIT_08s0040g02410 transcript:VIT_08s0040g02410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease P protein subunit p29 [Source:UniProtKB/TrEMBL;Acc:D7TQH0]
Sequence

MATGTILEDQKKRTLEALERRFAVAKAELLQQQEHLSKKRFRGVDEKVSPCTNSFSVGSS
THPTDSSVTPTLNASLKKGHATSQDVEANGPAYSQLSQTVHENLLATNAKITSKRGSTAD
KILHDLLKNGDSAHKYMMGSRSMKFDNWILLDNVVQGRGASGARIRDLLSHSKNSRKHIS
MKQNKRCGSLNLPQELHRYDIFKPMHDMWKGYMMQLLKNTGKNQLVQPLLSADLHGAIIL
VVECKIAAFNGVSGIMIRETAETLGIITQDDKFRVVPKKGSVFIFQADCWKVTLQGDKLT
SRNLAL

Transcript Sequence

Transcript ID

VIT_08s0040g02410.t01
Transcript Infomation

cdna chromosome:12X:8:13481632:13491849:1 gene:VIT_08s0040g02410 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribonuclease P protein subunit p29 [Source:UniProtKB/TrEMBL;Acc:D7TQH0]
Sequence

AGGCCCACCCACTTCTCTCACTCGGGCATCAAGAAGCTCTTTTCTGGAGTTGCCATCCAG
ACGAGAGAATCCCTAAAAGGCCCTATTTTCCTCTGCCACTCTCAATACTCGCAGGTACTA
ATCTAATCATGTTATTATTATTCTTTTTTGCAACCCCCGTTTGATTCCCAAGAAAATCCA
TCCCCCATTCGATTTCCGGGAAAATTCATCCTCGTTTGATTTCCGAGAAAATCCATGCAA
AACCCCCAAGGAAAACCAAAAAAATTGCTTTTTTTGCTCCCTGTGTTTTCTGGATCTGTT
CTTGGGGTCTCTTTGCTTTTGTGCCATTGGATTTCAATTTCACGAACCCTAAATCCACGA
TTTTTGAGCCAGGCTGAAAAACAAGAGAAGGCGAAGCCATTCCCACTGTCATGGCGACCG
GAACAATTCTTGAAGATCAAAAGAAACGCACTTTGGAAGCGTTGGAGCGAAGGTTTGCCG
TTGCCAAGGCTGAGCTTCTACAACAGCAGGAACATCTAAGCAAGAAACGATTTCGCGGAG
TAGATGAAAAAGTTAGTCCCTGCACAAATTCTTTCTCCGTTGGTTCTTCAACTCATCCGA
CTGACTCATCGGTTACGCCCACATTGAACGCCTCATTGAAGAAAGGTCATGCAACTTCAC
AAGATGTGGAAGCAAATGGTCCAGCGTATTCTCAGCTCTCTCAAACCGTTCATGAGAATT
TGTTGGCTACAAATGCAAAAATCACTAGTAAAAGAGGAAGCACAGCGGATAAAATTTTGC
ATGACCTTCTCAAAAATGGCGATTCAGCTCATAAATACATGATGGGATCCAGAAGTATGA
AATTTGACAATTGGATCCTTCTTGATAATGTTGTACAAGGACGTGGTGCTTCAGGTGCTC
GTATCAGGGATTTGCTGAGCCACTCGAAGAACTCCAGAAAACACATATCCATGAAGCAAA
ATAAAAGATGTGGATCATTGAATTTGCCTCAAGAGCTCCATAGGTATGATATTTTCAAGC
CGATGCATGACATGTGGAAAGGCTACATGATGCAACTTCTTAAAAATACTGGGAAAAATC
AGTTGGTTCAGCCTCTTCTCAGTGCAGACCTACATGGTGCTATTATTCTAGTTGTTGAGT
GTAAGATAGCTGCCTTCAATGGAGTGAGTGGTATCATGATTCGTGAAACTGCAGAAACAC
TTGGTATAATTACACAAGATGATAAATTCCGAGTTGTGCCCAAAAAGGGGTCTGTGTTTA
TTTTCCAAGCAGATTGCTGGAAAGTCACCTTGCAGGGAGACAAACTCACTTCAAGAAATT
TAGCCCTGTGATCTTGATATTGGTCTTTGCATCTAAGGATCTATCCAACTGTGCATAGAG
CTGCCTCAAGCTGTTGGATTCAAGATTTGGCCCAACATATTTATGTTTTGAATGTCTAAA
AAATGCGCTTACCAGAGTTCTCTGCGTCTCACTTTTTCTTTTAACTGAGATCTCTATCAA
AGGCTCTCAATTGTTGACTAAATTGCAGGAAGGTGAAGTGGGCAATGAAACCACGGATAA
CAGAAACTTCAAAGAGGTACCTGTAACATAAATGGTTGATTGGGCAGAGTTTGGTTGGTA
GATATAGGCAGAGGCAGCTCAGATTAGCTTCATAGGCACTTTGAAAAGAAAAAGAAATTA
AAGGGTGATTTCAGTCAGGTGGTCTTTATGTAAGGCCTTAATCATTGTAATATGCTTTTC
TGATAACAACTTTTAACTTTTAATTTTAGAGGGATATTATTTTTTCTAGGAATCAAATGT
GTTTGGTGTTTTCAGAAACTTTTATTTGGGAAATTCATTCAGAAAGTTGTAATAGCTTTT
ACCTTCAACTATTAGCCTCTGACTCATCTCCTGAG