Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0040g02300.t01
CDS Infomation

cds chromosome:12X:8:13402660:13410093:1 gene:VIT_08s0040g02300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAAAGGCACCTCTTTTCTGTTCTCCGGCATTACTTTCGACAAAAAGAAGTTCGCC
GCCGATTTCTCCAGGTTTAAGGAGAAAAAAGAGAGTGATGATTTGGTTGAGAGTGGGAAA
TCTGAAGCAGAGGAGGGGGCAAGGCCTGTGAAGAAGAGGAAGCGGAAGGCAACGGTTGCG
GATCCTGTAGAAGGATTCAATGTCTTCAAGACTTCAAAATCATCCGCTCAAGGAATCCAG
CAGAATGACCAGGAAAAAAGCGAACTTTCTCAAGCAAAGAAGGAACTCAATCGGCAAATT
GAGAGGGATGCGCTTTTGCGGAAGAAGCATAAGATTCATATTTCTGGAAATAATGTTCCA
TCTCCCTTGGAGAATTTTTCAGAGTTGAGCTCAAGATATGGATGTGAATCATATTTATTG
CACAACTTGGCGGAACTTGGATTTAAAGAGCCAACACCAATTCAAAGACAGGCTATTCCA
GTACTACTATCTGGACGCGAATGCTTTGCTTGTGCTCCTACTGGATCTGGAAAAACCTTG
GCTTTTGTGTGTCCAATGCTTATGAAACTTAAGCATGCATCAAAGGATGGCATCCGGGCT
GTTATCCTTTGTCCTACAAGGGAGCTAGCTGCTCAGACAGCCAGAGAGTCCAAGAAATTG
GCTAAAGGGAAGAAATTTTACATCAAGTTATTGACTAAAGAACTTTTAAGAAGTGGTGAT
ATTTCAAAACTGCCTTGTGATATACTCATATCTACACCTCTGCGCCTGCGGTCTGCTATC
CGCAAAAAAAAGCTCGATTTAAGCAGGGTTGAGTATCTTGTCCTGGATGAATCAGATAAA
CTGTTTGAGCTTGGCTTGGTGAAGCAGATTGATGCCGTGGTCAAAGCATGCTCAAATCCC
TCAATAATACGCTCATTGTTTAGTGCTACTTTACCTGATTTTGTTGAAGAGCTTGCTCGC
ACAATAATGCATGATGCTGTTCGAGTCATCATTGGCAGGAAGAATTCTGCTTCTGAACTT
ATAAAGCAAAAACTGGTGTTTGCTGGAAGTGAAGAGGGGAAGCTTCTTGCTCTTCGTCAA
AGCTTTGCAGAGAGTTTGAATCCACCGATTCTTCTCTTTGTCCAAAGCAAGGAACGTGCA
AAGGAGCTCTACACGGAACTGGCATTTGATGACATTAGAGTTGATGTTATCCATGCTGAT
TTGTCCCAATCACAGCGAGAAAATGCTGTGGATGACTTCAGAGCCGGGAAAACTTGGGTT
TTGATTGCAACTGATGTTATTGCTCGTGGTATGGATTTCAAAGGCATTAACTGTGTGATT
AATTATGACTTTCCAGATTCTCCTGCTGCATATATTCACAGGATTGGTCGTTCTGGCAGA
GCAGGAAGGACAGGAGAGGCTATTACCATTTACACAGAAGATGATGTTCCATTTTTGCGG
AACATTGCAAATGTGATGGCAGCTTCTGGCTGTGAGGTTCCGTCTTGGATTATGGCCTTG
CCCAAACTGAAGTGGAAGAAGCATCGGCCCCAAAGAGATTCTATATCCACAAAGCCAAAA
GATCAGAAAGAGTAA

Peptide Sequence

PEP ID

VIT_08s0040g02300.t01
PEP Infomation

pep chromosome:12X:8:13402660:13410093:1 gene:VIT_08s0040g02300 transcript:VIT_08s0040g02300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEKGTSFLFSGITFDKKKFAADFSRFKEKKESDDLVESGKSEAEEGARPVKKRKRKATVA
DPVEGFNVFKTSKSSAQGIQQNDQEKSELSQAKKELNRQIERDALLRKKHKIHISGNNVP
SPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTL
AFVCPMLMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKGKKFYIKLLTKELLRSGD
ISKLPCDILISTPLRLRSAIRKKKLDLSRVEYLVLDESDKLFELGLVKQIDAVVKACSNP
SIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNSASELIKQKLVFAGSEEGKLLALRQ
SFAESLNPPILLFVQSKERAKELYTELAFDDIRVDVIHADLSQSQRENAVDDFRAGKTWV
LIATDVIARGMDFKGINCVINYDFPDSPAAYIHRIGRSGRAGRTGEAITIYTEDDVPFLR
NIANVMAASGCEVPSWIMALPKLKWKKHRPQRDSISTKPKDQKE

Transcript Sequence

Transcript ID

VIT_08s0040g02300.t01
Transcript Infomation

cdna chromosome:12X:8:13402660:13410093:1 gene:VIT_08s0040g02300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTGGAATTAGAGGGAAATTTAGAAGGTTGCAGCGATGGAGAAAGGCACCTCTTTTCTGT
TCTCCGGCATTACTTTCGACAAAAAGAAGTTCGCCGCCGATTTCTCCAGGTTTAAGGAGA
AAAAAGAGAGTGATGATTTGGTTGAGAGTGGGAAATCTGAAGCAGAGGAGGGGGCAAGGC
CTGTGAAGAAGAGGAAGCGGAAGGCAACGGTTGCGGATCCTGTAGAAGGATTCAATGTCT
TCAAGACTTCAAAATCATCCGCTCAAGGAATCCAGCAGAATGACCAGGAAAAAAGCGAAC
TTTCTCAAGCAAAGAAGGAACTCAATCGGCAAATTGAGAGGGATGCGCTTTTGCGGAAGA
AGCATAAGATTCATATTTCTGGAAATAATGTTCCATCTCCCTTGGAGAATTTTTCAGAGT
TGAGCTCAAGATATGGATGTGAATCATATTTATTGCACAACTTGGCGGAACTTGGATTTA
AAGAGCCAACACCAATTCAAAGACAGGCTATTCCAGTACTACTATCTGGACGCGAATGCT
TTGCTTGTGCTCCTACTGGATCTGGAAAAACCTTGGCTTTTGTGTGTCCAATGCTTATGA
AACTTAAGCATGCATCAAAGGATGGCATCCGGGCTGTTATCCTTTGTCCTACAAGGGAGC
TAGCTGCTCAGACAGCCAGAGAGTCCAAGAAATTGGCTAAAGGGAAGAAATTTTACATCA
AGTTATTGACTAAAGAACTTTTAAGAAGTGGTGATATTTCAAAACTGCCTTGTGATATAC
TCATATCTACACCTCTGCGCCTGCGGTCTGCTATCCGCAAAAAAAAGCTCGATTTAAGCA
GGGTTGAGTATCTTGTCCTGGATGAATCAGATAAACTGTTTGAGCTTGGCTTGGTGAAGC
AGATTGATGCCGTGGTCAAAGCATGCTCAAATCCCTCAATAATACGCTCATTGTTTAGTG
CTACTTTACCTGATTTTGTTGAAGAGCTTGCTCGCACAATAATGCATGATGCTGTTCGAG
TCATCATTGGCAGGAAGAATTCTGCTTCTGAACTTATAAAGCAAAAACTGGTGTTTGCTG
GAAGTGAAGAGGGGAAGCTTCTTGCTCTTCGTCAAAGCTTTGCAGAGAGTTTGAATCCAC
CGATTCTTCTCTTTGTCCAAAGCAAGGAACGTGCAAAGGAGCTCTACACGGAACTGGCAT
TTGATGACATTAGAGTTGATGTTATCCATGCTGATTTGTCCCAATCACAGCGAGAAAATG
CTGTGGATGACTTCAGAGCCGGGAAAACTTGGGTTTTGATTGCAACTGATGTTATTGCTC
GTGGTATGGATTTCAAAGGCATTAACTGTGTGATTAATTATGACTTTCCAGATTCTCCTG
CTGCATATATTCACAGGATTGGTCGTTCTGGCAGAGCAGGAAGGACAGGAGAGGCTATTA
CCATTTACACAGAAGATGATGTTCCATTTTTGCGGAACATTGCAAATGTGATGGCAGCTT
CTGGCTGTGAGGTTCCGTCTTGGATTATGGCCTTGCCCAAACTGAAGTGGAAGAAGCATC
GGCCCCAAAGAGATTCTATATCCACAAAGCCAAAAGATCAGAAAGAGTAAGGCTGCAAAG
TGATTCCATATCCACCAAGCCAAAAGATGAGAAAGACCAAGGCTGCAAAGAGATTCTACA
TTGACCTGGCTAAAAGATCTGAAATACTAAGGGCGCGAGGAGATTATCTATCTACTTGGC
CAAATGATCAGAAAGAGCAAGGCCACTAGAAAATTTCCTATTTTGTTGTAACTGTTTTAG
GCTTTTGTGATTTCAGTTTGCTGTTTCTTCTCCCTTGCAAGAGGGAGATGAGATTGTATT
AGTCATTTTTTTGACATTTTAGAGTCGAGGACTCGGGGGCTTGGGATCATGTCCAAGTTC
CGGATCTTTGTGGATCATTCCCAGATCAAAATGATCAGCAAAGTGGCAACTGGCCAATTA
CAGTGA