Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0040g02290.t01
CDS Infomation

cds chromosome:12X:8:13391558:13401740:1 gene:VIT_08s0040g02290 gene_biotype:protein_coding transcript_biotype:protein_coding description:Importin subunit alpha [Source:UniProtKB/TrEMBL;Acc:D7TQI1]
Sequence

ATGGCTGATGATGGATTGGCTTCGCATAGAAGAGACCCTATCAAGTCTTCAGTTGGGAAT
GTGGCGGCAAATCGAAGGAGGCAACAAGCTATTACAGTGGGAAAGGAAAGAAGAGAAGCT
TTGGTGCGCACGAAGCGCCTTTGCAGGGTGGGGATTAGCGGCGACAGTGATGTTCCAGTT
GATGGTGATATGATGATTGATGAAGAGCAGTCAATATTAGAGACACAGACTTCTTCAGCT
GTGGAAGAGTTAAAGTCAACGGTCATTTATCAGGGAAAAGGTGCAATGCAGAAGAGGGTG
AGTGCCCTTCGTGATTTAAGGCGTCTATTATCAAGATCCGAATTCCCTCCAATTGAAGCT
GCTCTTAAAGCTGGAGCAGTTTCTGTTCTTGTGCAGTGTCTTTCATTTGGTTCTCCAGAT
GAGCAGTTGCTTGAGGCAGCTTGGTGCCTTACAAATATTGCAGCTGGAAAACCAGAAGAA
ACAAAAGCTTTGGTGCCTGCATTACCACTGCTTATTGCTCATTTGGGAGAAAAGAGTTCC
CCTCCTGTTGCTGAGCAGTGTGCATGGGCGTTGGGAAATGTTGCTGGTGAAGGAGAGGAG
CTGAGAAATATTCTACTATCACAAGGAGCCTTACCACCTCTTGCTAGAATGATGGTGCCA
AATAAGGGCTCAACTGTGAGAACAGCTGCTTGGGCATTATCGAATCTAATCAAGGGACCA
GATCCTAAAGCTGCATCAGAACTCATACAAATTGATGGGGTACTAGATGCAATTCTTAGG
CATTTGAGAAAAGGGGATGAAGAGTTGGCAACTGAAGTAGCATGGGTGGTAGTTTATCTC
TCAGCCCTTTCAGACACTGCCACTAGCATACTGGTGAAGAGTAATCTCCTTCAACTACTA
GTTGAAAGATTAGCGACATCAAATAGTTTGCAATTGCTCATTCCGGTGCTGAGAAGTTTA
GGAAACCTTGGAGCTGGTGCTAGTCATGCAACTTGTATTCTTGTGGTTGGACATGAAATG
ACAGATAATTTTATAGCAGCACTTGTAAAATGTTTGGGAAGTGAGCACCGGGTCTTGAAG
AAGGAAGCAGCTTGGGTGCTATCCAATATAGCTGCTGGTTCCATTGAACACAAGAAGTTG
ATATATTCAAGTGAAGCAGTACCATTGTTACTGCGCCTTCTTTCAACTGCACCATTTGAT
ATAAGGAAAGAGGTAGCATATGCATTGGGCAACCTCTGTGTAGTTTCATCAGAAGGTGGT
GGAAAGCCAGCTCTGATCCTGGAACACTTGGTTTCACTTGTTGGTAGAGGTTGCCTTCTG
GGTTTTATTGATTTGGTCAGATCTGCTGATACTGAGGCTGCAAAGCTTGGGCTTCAATTC
ATGGAGCTGGTCCTAAGGGGGATGCCAAATGGTGAGGGTCCAAAGCTTGTGGAGAGAGAG
GATGGGATTGATGCAATGGAAAGATTCCAATTTCATGAAAATGAAGACCTTCGAAACATG
GCAAACGGGTTAGTTGATACGTACTTTGGGGAGGAATATGGGCTTGACGAATAG

Peptide Sequence

PEP ID

VIT_08s0040g02290.t01
PEP Infomation

pep chromosome:12X:8:13391558:13401740:1 gene:VIT_08s0040g02290 transcript:VIT_08s0040g02290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Importin subunit alpha [Source:UniProtKB/TrEMBL;Acc:D7TQI1]
Sequence

MADDGLASHRRDPIKSSVGNVAANRRRQQAITVGKERREALVRTKRLCRVGISGDSDVPV
DGDMMIDEEQSILETQTSSAVEELKSTVIYQGKGAMQKRVSALRDLRRLLSRSEFPPIEA
ALKAGAVSVLVQCLSFGSPDEQLLEAAWCLTNIAAGKPEETKALVPALPLLIAHLGEKSS
PPVAEQCAWALGNVAGEGEELRNILLSQGALPPLARMMVPNKGSTVRTAAWALSNLIKGP
DPKAASELIQIDGVLDAILRHLRKGDEELATEVAWVVVYLSALSDTATSILVKSNLLQLL
VERLATSNSLQLLIPVLRSLGNLGAGASHATCILVVGHEMTDNFIAALVKCLGSEHRVLK
KEAAWVLSNIAAGSIEHKKLIYSSEAVPLLLRLLSTAPFDIRKEVAYALGNLCVVSSEGG
GKPALILEHLVSLVGRGCLLGFIDLVRSADTEAAKLGLQFMELVLRGMPNGEGPKLVERE
DGIDAMERFQFHENEDLRNMANGLVDTYFGEEYGLDE

Transcript Sequence

Transcript ID

VIT_08s0040g02290.t01
Transcript Infomation

cdna chromosome:12X:8:13391558:13401740:1 gene:VIT_08s0040g02290 gene_biotype:protein_coding transcript_biotype:protein_coding description:Importin subunit alpha [Source:UniProtKB/TrEMBL;Acc:D7TQI1]
Sequence

AAAAAAGAAAAAATAAAAAAACCGAAAGAGGAGAAAAAAGGCGGAGGATTTTGGCGCTTG
AGGTTTTTTGCCGGAATCTCTACTGTAAAACCCCACTTCGTTCATCTGCTTCTTCGATTT
AGTTGTCAATAATGGCTGATGATGGATTGGCTTCGCATAGAAGAGACCCTATCAAGTCTT
CAGTTGGGAATGTGGCGGCAAATCGAAGGAGGCAACAAGCTATTACAGTGGGAAAGGAAA
GAAGAGAAGCTTTGGTGCGCACGAAGCGCCTTTGCAGGGTGGGGATTAGCGGCGACAGTG
ATGTTCCAGTTGATGGTGATATGATGATTGATGAAGAGCAGTCAATATTAGAGACACAGA
CTTCTTCAGCTGTGGAAGAGTTAAAGTCAACGGTCATTTATCAGGGAAAAGGTGCAATGC
AGAAGAGGGTGAGTGCCCTTCGTGATTTAAGGCGTCTATTATCAAGATCCGAATTCCCTC
CAATTGAAGCTGCTCTTAAAGCTGGAGCAGTTTCTGTTCTTGTGCAGTGTCTTTCATTTG
GTTCTCCAGATGAGCAGTTGCTTGAGGCAGCTTGGTGCCTTACAAATATTGCAGCTGGAA
AACCAGAAGAAACAAAAGCTTTGGTGCCTGCATTACCACTGCTTATTGCTCATTTGGGAG
AAAAGAGTTCCCCTCCTGTTGCTGAGCAGTGTGCATGGGCGTTGGGAAATGTTGCTGGTG
AAGGAGAGGAGCTGAGAAATATTCTACTATCACAAGGAGCCTTACCACCTCTTGCTAGAA
TGATGGTGCCAAATAAGGGCTCAACTGTGAGAACAGCTGCTTGGGCATTATCGAATCTAA
TCAAGGGACCAGATCCTAAAGCTGCATCAGAACTCATACAAATTGATGGGGTACTAGATG
CAATTCTTAGGCATTTGAGAAAAGGGGATGAAGAGTTGGCAACTGAAGTAGCATGGGTGG
TAGTTTATCTCTCAGCCCTTTCAGACACTGCCACTAGCATACTGGTGAAGAGTAATCTCC
TTCAACTACTAGTTGAAAGATTAGCGACATCAAATAGTTTGCAATTGCTCATTCCGGTGC
TGAGAAGTTTAGGAAACCTTGGAGCTGGTGCTAGTCATGCAACTTGTATTCTTGTGGTTG
GACATGAAATGACAGATAATTTTATAGCAGCACTTGTAAAATGTTTGGGAAGTGAGCACC
GGGTCTTGAAGAAGGAAGCAGCTTGGGTGCTATCCAATATAGCTGCTGGTTCCATTGAAC
ACAAGAAGTTGATATATTCAAGTGAAGCAGTACCATTGTTACTGCGCCTTCTTTCAACTG
CACCATTTGATATAAGGAAAGAGGTAGCATATGCATTGGGCAACCTCTGTGTAGTTTCAT
CAGAAGGTGGTGGAAAGCCAGCTCTGATCCTGGAACACTTGGTTTCACTTGTTGGTAGAG
GTTGCCTTCTGGGTTTTATTGATTTGGTCAGATCTGCTGATACTGAGGCTGCAAAGCTTG
GGCTTCAATTCATGGAGCTGGTCCTAAGGGGGATGCCAAATGGTGAGGGTCCAAAGCTTG
TGGAGAGAGAGGATGGGATTGATGCAATGGAAAGATTCCAATTTCATGAAAATGAAGACC
TTCGAAACATGGCAAACGGGTTAGTTGATACGTACTTTGGGGAGGAATATGGGCTTGACG
AATAGGCATCCTCGCCCAACTGATGCCTGGATTTGGAATGACCCCTGGTTCCAATCCCTC
ATCCGTGATGTATACTACACCTTTATCTTAGTCTCCTTTGGCAATGTTTGCTGCAAGTTC
GACCCCAAATTTAGGGTCCACACTAAATATGATCTTGCATGGGGAAGTCTCATCTGCTGT
AGGTTGATCATCTAACATGTCTGTCATCTGAAGCGTATTTGGAGAATTTCTTCTTGTCAA
ACATGTAAATTTTTTAGCTTCCATTTCTCTGTGTTGCTGGGTTTGGTCGAGGACTGTATA
TTAAACCGCTTTGCACATTAGTGTTCATCTTTACGTTTACTCGGAAATGGACTCATTTCC
AGAATTTGTA