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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0040g01890.t01
CDS Infomation

cds chromosome:12X:8:12986520:12988082:1 gene:VIT_08s0040g01890 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aquaporin PIP23 [Source:UniProtKB/TrEMBL;Acc:A3FA68]
Sequence

ATGGCCAAGGACATTGAGGTTGCAGGGCACGGAGACCTCACATTGAAGGACTACCACGAC
CCACCACCGGCGCCACTGGTCGACCCTGAGGAATTGGGGTCCTGGTCCTTTTACAGGGCC
ATCATTGCCGAGTTCGTGGCCACCCTTTTGTTCCTCTACGTTACTGTGTTGACGGTGATT
GGGTACAAGAACCAGACTGATCCCTACCATCACGGAAATGAATGCAACGGGGTTGGTATT
CTTGGCATTGCTTGGGCCTTTGGTGGCATGATCTTCATCCTTGTTTACTGCACCGCCGGC
ATCTCTGGAGGGCATATTAATCCTGCAGTGACGTTCGGGCTATTCCTGGCTAGAAAGGTG
TCGCTGGTCCGAGCCGTGATGTACATGGTGGCCCAGTGCGGGGGAGCCATCTGCGGCTGT
GGCCTGGTCAAGCTATTCCAGGATATTTACTACATCAGATACGGTGGTGGCGCCAATGAG
CTCGCCTCTGGATACAGTATAGGAACGGGGTTGGCTGCTGAGATTATTGGCACCTTCGTT
CTTGTCTACACCGTCTTCTCTGCTACTGATCCCAAAAGAAATGCAAGAGATTCCCATGTG
CCTGTTTTGGCACCACTCCCCATTGGATTTGCTGTGTTCATGGTTCACTTAGCCACGATC
CCCATCACCGGTACCGGAATCAACCCGGCTCGAAGTCTCGGAGCTGCTGTCATCTACAAC
CAACCCAAAGCCTGGAGTGACCATTGGGTATTTTGGGCTGGACCCTTCATTGGTGCAGCC
ATTGCAGCATTCTATCACCAGTTCATATTGAGAGCTGGAGCTGTTAAAGCTCTAGGGTCT
TTCAAGAGCAGTTCCCACATGTAA

Peptide Sequence

PEP ID

VIT_08s0040g01890.t01
PEP Infomation

pep chromosome:12X:8:12986520:12988082:1 gene:VIT_08s0040g01890 transcript:VIT_08s0040g01890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aquaporin PIP23 [Source:UniProtKB/TrEMBL;Acc:A3FA68]
Sequence

MAKDIEVAGHGDLTLKDYHDPPPAPLVDPEELGSWSFYRAIIAEFVATLLFLYVTVLTVI
GYKNQTDPYHHGNECNGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKV
SLVRAVMYMVAQCGGAICGCGLVKLFQDIYYIRYGGGANELASGYSIGTGLAAEIIGTFV
LVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYN
QPKAWSDHWVFWAGPFIGAAIAAFYHQFILRAGAVKALGSFKSSSHM

Transcript Sequence

Transcript ID

VIT_08s0040g01890.t01
Transcript Infomation

cdna chromosome:12X:8:12986520:12988082:1 gene:VIT_08s0040g01890 gene_biotype:protein_coding transcript_biotype:protein_coding description:Aquaporin PIP23 [Source:UniProtKB/TrEMBL;Acc:A3FA68]
Sequence

CTCACTCTTGCTCAAGCTCACTGAGAAGCTAGAAAACACATCTCTCTGTGTTTCCCTCAC
TAGAAGAGGTGGGTTGCTATGGCCAAGGACATTGAGGTTGCAGGGCACGGAGACCTCACA
TTGAAGGACTACCACGACCCACCACCGGCGCCACTGGTCGACCCTGAGGAATTGGGGTCC
TGGTCCTTTTACAGGGCCATCATTGCCGAGTTCGTGGCCACCCTTTTGTTCCTCTACGTT
ACTGTGTTGACGGTGATTGGGTACAAGAACCAGACTGATCCCTACCATCACGGAAATGAA
TGCAACGGGGTTGGTATTCTTGGCATTGCTTGGGCCTTTGGTGGCATGATCTTCATCCTT
GTTTACTGCACCGCCGGCATCTCTGGAGGGCATATTAATCCTGCAGTGACGTTCGGGCTA
TTCCTGGCTAGAAAGGTGTCGCTGGTCCGAGCCGTGATGTACATGGTGGCCCAGTGCGGG
GGAGCCATCTGCGGCTGTGGCCTGGTCAAGCTATTCCAGGATATTTACTACATCAGATAC
GGTGGTGGCGCCAATGAGCTCGCCTCTGGATACAGTATAGGAACGGGGTTGGCTGCTGAG
ATTATTGGCACCTTCGTTCTTGTCTACACCGTCTTCTCTGCTACTGATCCCAAAAGAAAT
GCAAGAGATTCCCATGTGCCTGTTTTGGCACCACTCCCCATTGGATTTGCTGTGTTCATG
GTTCACTTAGCCACGATCCCCATCACCGGTACCGGAATCAACCCGGCTCGAAGTCTCGGA
GCTGCTGTCATCTACAACCAACCCAAAGCCTGGAGTGACCATTGGGTATTTTGGGCTGGA
CCCTTCATTGGTGCAGCCATTGCAGCATTCTATCACCAGTTCATATTGAGAGCTGGAGCT
GTTAAAGCTCTAGGGTCTTTCAAGAGCAGTTCCCACATGTAATGGGGTAATGCATTTCAA
TCCATATGGTCCGACAGGCTCTGCATTATATGAGTTGTACATTTAGGTGTATAATAGTGG
TGAGGATGTGTGACGAATTTGTGGCCCTGTAGGAGCTTGGCACTTGTTTTGAATGTGCCC
CGGGATCATCATCTGCTCTGTTTTCTTTCCTTTCCTTTCCCTTTTTTGCCTCGTTTTGTA
GTAGTGATGTTGTTGAGATTAATTTATCAACAACTCTGCTCTAATAAACTCCTTTATCAG
TTCATCCATTACCC