Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0040g01220.t01
CDS Infomation

cds chromosome:12X:8:12250088:12253345:-1 gene:VIT_08s0040g01220 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:F6HR61]
Sequence

ATGATTGCTATTACAGACCTCTACCACGTCCTCACATCCGTTGTTCCTCTCTATGTGGCC
ATGATATTGGCTTATGGGTCTGTAAAATGGTGGAAGATCTTCAGCCCTGATCAATGCTCC
GGTATCAACAGATTCGTAGCACTGTTTGCTGTCCCCCTGCTTTCGTTTCACTTCATCTCC
ACCAACGACCCATATGCCATGAACTACAGATTCATAGCTGCAGACACTCTTCAGAAAATC
ATAGTGTTGGTGGTTTTAGCTATTTGGTCCAGAGTCAGCTCAAGAGGGTGTCTTGAATGG
TCCATCACTCTGTTCTCGCTCTCAACTCTGCCCAACACTCTGGTCATGGGCATTCCTTTG
TTGAAGGGTATGTATGGAGAATATTCGGGAACCTTAATGGTGCAAATAGTTGTTCTTCAA
TGCATAATATGGTATACTTTGATGCTGTTCTTGTTTGAGTACAGAGGAGCCAGGCTCTTG
ATTGTAGAGCAGTTTCCAGATACTGCTGGTTCTATTATTTCATTCAGAGTTGATTCTGAC
GTCATCTCTCTGGATGGGAAAGAGCCTCTGCAGACGGAGGCTGAAGTTGGTGAAGATGGA
AAACTTCATGTTACAGTGAGAAAGTCCACTAGTTCTCGCTCTGAAATATTTTCCAGGCGA
TCACACGGCCCTAATTCGGGCGTGTCCTTGACTCCCCGGCCTTCCAATTTAACGAATGCA
GAGATTTACTCTCTGCAATCATCAAGGAATCCAACTCCCAGGGGTTCCAGTTTCAATCAC
ACTGATTTCTATTCAATGGTGAATGGGAAAAATATGAGCAATGTGAGCCCGAGGCAATCA
AATTTCGGGAACTTGACTTTTGATGAGGAAAACGGAATTGGCGGATTCCCAAATCCTCCC
AGAGCAAACGGGGTATATTCACAGGGTGGTGGTTACCCTGCACCGCCGAGTGCCGGAATC
TTCTCTCCGGTGGGGGGACCTGGAGCAAAGAAGAAGGCGAACGGGGCAGATGGGGGGAAG
GATCTTCACATGTTTGTATGGAGCTCCAGCGCATCGCCAGTGTCGGAAGGAGGCATTCAT
GTTTTCAGGGGTGGAGATTATGGGAATGAGGTTGCTGGTGGGGTACTACCTCAAACTAAA
GATTATGATGAGTCCAGACAAGATGAGTTCAGTTTTGGAAACAGACCGGTCGCGAATGGT
GGTGACCGAGAAGGGGCCATGATGTCTAAGCTGGGGTCCAGCTCCACCGCAGAGCTCAAC
CCCAAGGCTGCTGCCCAGTCAAAGCCAACATCCATGCCGCCTGCTAGCGTCATGACCAGA
CTCATCCTGATAATGGTGTGGAGAAAACTCATTAGGAATCCCAACACTTATTCTAGCCTC
ATTGGCCTCACCTGGTCCTTGGTCTCTTTCAAGTGGGGGATTGAAATGCCTGCTATTATA
GCCAAGTCTATATCCATTTTATCTGATGCAGGTCTTGGAATGGCCATGTTCAGTCTTGGT
TTGTTCATGGCACTGCAGCCAAGAATTATTGCTTGTGGGAACTCCATTGCCACATTTGCC
ATGGCTGTTAGATTCCTCACAGGTCCTGCGGTCATGGCTGCTGCTTCCATTGCAGTTGGT
TTAAGAGGGGTTCTCTTACATATTGCCATTGTACAGGCGGCTCTTCCTCAGGGAATTGTC
CCCTTTGTGTTTGCCAAGGAATACAATGTTCATCCTGACATTCTGAGCACAGGAGTAATA
TTCGGAATGCTAATAGCTCTACCCATCACACTTGTGTACTATATCTTACTGGGGCTATGA

Peptide Sequence

PEP ID

VIT_08s0040g01220.t01
PEP Infomation

pep chromosome:12X:8:12250088:12253345:-1 gene:VIT_08s0040g01220 transcript:VIT_08s0040g01220.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:F6HR61]
Sequence

MIAITDLYHVLTSVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIS
TNDPYAMNYRFIAADTLQKIIVLVVLAIWSRVSSRGCLEWSITLFSLSTLPNTLVMGIPL
LKGMYGEYSGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAGSIISFRVDSD
VISLDGKEPLQTEAEVGEDGKLHVTVRKSTSSRSEIFSRRSHGPNSGVSLTPRPSNLTNA
EIYSLQSSRNPTPRGSSFNHTDFYSMVNGKNMSNVSPRQSNFGNLTFDEENGIGGFPNPP
RANGVYSQGGGYPAPPSAGIFSPVGGPGAKKKANGADGGKDLHMFVWSSSASPVSEGGIH
VFRGGDYGNEVAGGVLPQTKDYDESRQDEFSFGNRPVANGGDREGAMMSKLGSSSTAELN
PKAAAQSKPTSMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFKWGIEMPAII
AKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIATFAMAVRFLTGPAVMAAASIAVG
LRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL

Transcript Sequence

Transcript ID

VIT_08s0040g01220.t01
Transcript Infomation

cdna chromosome:12X:8:12250088:12253345:-1 gene:VIT_08s0040g01220 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:F6HR61]
Sequence

AGGAAAGAAAGCATGATTGCTATTACAGACCTCTACCACGTCCTCACATCCGTTGTTCCT
CTCTATGTGGCCATGATATTGGCTTATGGGTCTGTAAAATGGTGGAAGATCTTCAGCCCT
GATCAATGCTCCGGTATCAACAGATTCGTAGCACTGTTTGCTGTCCCCCTGCTTTCGTTT
CACTTCATCTCCACCAACGACCCATATGCCATGAACTACAGATTCATAGCTGCAGACACT
CTTCAGAAAATCATAGTGTTGGTGGTTTTAGCTATTTGGTCCAGAGTCAGCTCAAGAGGG
TGTCTTGAATGGTCCATCACTCTGTTCTCGCTCTCAACTCTGCCCAACACTCTGGTCATG
GGCATTCCTTTGTTGAAGGGTATGTATGGAGAATATTCGGGAACCTTAATGGTGCAAATA
GTTGTTCTTCAATGCATAATATGGTATACTTTGATGCTGTTCTTGTTTGAGTACAGAGGA
GCCAGGCTCTTGATTGTAGAGCAGTTTCCAGATACTGCTGGTTCTATTATTTCATTCAGA
GTTGATTCTGACGTCATCTCTCTGGATGGGAAAGAGCCTCTGCAGACGGAGGCTGAAGTT
GGTGAAGATGGAAAACTTCATGTTACAGTGAGAAAGTCCACTAGTTCTCGCTCTGAAATA
TTTTCCAGGCGATCACACGGCCCTAATTCGGGCGTGTCCTTGACTCCCCGGCCTTCCAAT
TTAACGAATGCAGAGATTTACTCTCTGCAATCATCAAGGAATCCAACTCCCAGGGGTTCC
AGTTTCAATCACACTGATTTCTATTCAATGGTGAATGGGAAAAATATGAGCAATGTGAGC
CCGAGGCAATCAAATTTCGGGAACTTGACTTTTGATGAGGAAAACGGAATTGGCGGATTC
CCAAATCCTCCCAGAGCAAACGGGGTATATTCACAGGGTGGTGGTTACCCTGCACCGCCG
AGTGCCGGAATCTTCTCTCCGGTGGGGGGACCTGGAGCAAAGAAGAAGGCGAACGGGGCA
GATGGGGGGAAGGATCTTCACATGTTTGTATGGAGCTCCAGCGCATCGCCAGTGTCGGAA
GGAGGCATTCATGTTTTCAGGGGTGGAGATTATGGGAATGAGGTTGCTGGTGGGGTACTA
CCTCAAACTAAAGATTATGATGAGTCCAGACAAGATGAGTTCAGTTTTGGAAACAGACCG
GTCGCGAATGGTGGTGACCGAGAAGGGGCCATGATGTCTAAGCTGGGGTCCAGCTCCACC
GCAGAGCTCAACCCCAAGGCTGCTGCCCAGTCAAAGCCAACATCCATGCCGCCTGCTAGC
GTCATGACCAGACTCATCCTGATAATGGTGTGGAGAAAACTCATTAGGAATCCCAACACT
TATTCTAGCCTCATTGGCCTCACCTGGTCCTTGGTCTCTTTCAAGTGGGGGATTGAAATG
CCTGCTATTATAGCCAAGTCTATATCCATTTTATCTGATGCAGGTCTTGGAATGGCCATG
TTCAGTCTTGGTTTGTTCATGGCACTGCAGCCAAGAATTATTGCTTGTGGGAACTCCATT
GCCACATTTGCCATGGCTGTTAGATTCCTCACAGGTCCTGCGGTCATGGCTGCTGCTTCC
ATTGCAGTTGGTTTAAGAGGGGTTCTCTTACATATTGCCATTGTACAGGCGGCTCTTCCT
CAGGGAATTGTCCCCTTTGTGTTTGCCAAGGAATACAATGTTCATCCTGACATTCTGAGC
ACAGGAGTAATATTCGGAATGCTAATAGCTCTACCCATCACACTTGTGTACTATATCTTA
CTGGGGCTATGAAGATGAAG