Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0040g00780.t01
CDS Infomation

cds chromosome:12X:8:11733507:11736448:-1 gene:VIT_08s0040g00780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTCTCCTTCTGGTTCTTATCTCAATCACAGCCATCTTCCTCGCTTACAAGCTCTAC
CAGCGCCTCAGATTCAAGCTCCCCCCGGGCCCACACCCCTGGCCCATCGTCGGAAACCTC
TACGACATCAAGCCGGTGAGGTTCCGGTGCTTTGCGGAGTGGTCACAGGCCTATGGCCCC
ATCATATCGGTGTGGTTCGGGTCAACCCTGAACGTCATAGTTTCAAATTCAGAGCTGGCA
AAGGAGGCTCTGAAGGAGAAAGATCAGCAACTGGCTGATAGGCACAGGAGCAGATCCGCT
GCTAAATTCAGCAGAGACGGGAAGGACCTGATATGGGCCGACTATGGACCTCACTACGTC
AAGGTCCGAAAGGTGTGCACCCTTGAGCTCTTCTCTCCCAAGAGGCTTGAAGCTCTCAGA
CCCATCAGAGAAGATGAAGTGACAGCCATGGTTGAATCCATTTTCAAAGATGTCACCAAT
CCTGAAAATCTTGGGAAGAGCATATTGTTGAAGAAGTATTTGGGAGCAGTGGCGTTCAAT
AACATTACAAGACTGGCATTTGGGAAAAGGTTTATGAATTCGGAGGGTGTGATCGACGAG
CAGGGTTTGGAATTCAAGGCCATTGTGGCCAATGGGCTAAAGCTCGGTGCATCACTAGCC
ATGGCCGAGCACATCCCATGGCTTCGCTGGATGTTTCCCCTTGAGGAAGAAGCGTTTGCC
AAGCACGGTGCGCGTCGCGACCGACTCACTAGAGCCATCATGGAAGAGCACACCCTTGCC
CGCGAGAAGAGCGGTGGTGCCAAGCAGCATTTTGTGGATGCTTTGCTCACTCTCCAAGAT
AAATATGATCTAAGTGAGGACACCATTATTGGGCTGCTTTGGGATATGATTACTGCCGGC
ATGGACACAACTGCTATTTCAGTTGAATGGGCCATGGCCGAGCTGATCAAGAACCCTAGG
GTCCAACAAAAGGTTCAAGCAGAGTTAGACCATGTAATTGGGCTGGACCGCGTCATGAGC
GAATCTGACTTCTCCAACCTCCCTTACCTACAATCTGTAGCCAAGGAGGCACTGAGGCTG
CACCCTCCAACCCCATTGATGCTCCCCCATCGGGCCAATGCCAATGTTAAGATCGGTGGC
TATGACATTCCAAAGGGATCCAATGTTCATGTAAATGTATGGGCTGTGGCACGTGATCCA
GCGGTGTGGAAAGATCCAGAAGAGTTCCGACCCGAACGGTTCCTGGAGGAGGATGTTGAT
ATGAAGGGTCATGATTTTAGGCTACTGCCTTTTGGTGCTGGGAGACGTGTGTGCCCAGGT
GCACAACTTGGTATCAATTTGGTTACGTCAATGTTGGGTCACCTACTGCACCATTTTAAC
TGGGCTCCACCCGAGGGGGTTAACCCAGAGGATCTGGACATGTCGGAGAACCCTGGATTG
GTCAGTTACATGAGGACTCCGCTACAGGCTATTCCTACTTCAAGGTTACCTGCAAGCTTA
TACAAAAGGATGGCTGTGGATATTTAA

Peptide Sequence

PEP ID

VIT_08s0040g00780.t01
PEP Infomation

pep chromosome:12X:8:11733507:11736448:-1 gene:VIT_08s0040g00780 transcript:VIT_08s0040g00780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALLLVLISITAIFLAYKLYQRLRFKLPPGPHPWPIVGNLYDIKPVRFRCFAEWSQAYGP
IISVWFGSTLNVIVSNSELAKEALKEKDQQLADRHRSRSAAKFSRDGKDLIWADYGPHYV
KVRKVCTLELFSPKRLEALRPIREDEVTAMVESIFKDVTNPENLGKSILLKKYLGAVAFN
NITRLAFGKRFMNSEGVIDEQGLEFKAIVANGLKLGASLAMAEHIPWLRWMFPLEEEAFA
KHGARRDRLTRAIMEEHTLAREKSGGAKQHFVDALLTLQDKYDLSEDTIIGLLWDMITAG
MDTTAISVEWAMAELIKNPRVQQKVQAELDHVIGLDRVMSESDFSNLPYLQSVAKEALRL
HPPTPLMLPHRANANVKIGGYDIPKGSNVHVNVWAVARDPAVWKDPEEFRPERFLEEDVD
MKGHDFRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFNWAPPEGVNPEDLDMSENPGL
VSYMRTPLQAIPTSRLPASLYKRMAVDI

Transcript Sequence

Transcript ID

VIT_08s0040g00780.t01
Transcript Infomation

cdna chromosome:12X:8:11733507:11736448:-1 gene:VIT_08s0040g00780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCCCTCCAATGGCTCTCCTTCTGGTTCTTATCTCAATCACAGCCATCTTCCTCGCTTAC
AAGCTCTACCAGCGCCTCAGATTCAAGCTCCCCCCGGGCCCACACCCCTGGCCCATCGTC
GGAAACCTCTACGACATCAAGCCGGTGAGGTTCCGGTGCTTTGCGGAGTGGTCACAGGCC
TATGGCCCCATCATATCGGTGTGGTTCGGGTCAACCCTGAACGTCATAGTTTCAAATTCA
GAGCTGGCAAAGGAGGCTCTGAAGGAGAAAGATCAGCAACTGGCTGATAGGCACAGGAGC
AGATCCGCTGCTAAATTCAGCAGAGACGGGAAGGACCTGATATGGGCCGACTATGGACCT
CACTACGTCAAGGTCCGAAAGGTGTGCACCCTTGAGCTCTTCTCTCCCAAGAGGCTTGAA
GCTCTCAGACCCATCAGAGAAGATGAAGTGACAGCCATGGTTGAATCCATTTTCAAAGAT
GTCACCAATCCTGAAAATCTTGGGAAGAGCATATTGTTGAAGAAGTATTTGGGAGCAGTG
GCGTTCAATAACATTACAAGACTGGCATTTGGGAAAAGGTTTATGAATTCGGAGGGTGTG
ATCGACGAGCAGGGTTTGGAATTCAAGGCCATTGTGGCCAATGGGCTAAAGCTCGGTGCA
TCACTAGCCATGGCCGAGCACATCCCATGGCTTCGCTGGATGTTTCCCCTTGAGGAAGAA
GCGTTTGCCAAGCACGGTGCGCGTCGCGACCGACTCACTAGAGCCATCATGGAAGAGCAC
ACCCTTGCCCGCGAGAAGAGCGGTGGTGCCAAGCAGCATTTTGTGGATGCTTTGCTCACT
CTCCAAGATAAATATGATCTAAGTGAGGACACCATTATTGGGCTGCTTTGGGATATGATT
ACTGCCGGCATGGACACAACTGCTATTTCAGTTGAATGGGCCATGGCCGAGCTGATCAAG
AACCCTAGGGTCCAACAAAAGGTTCAAGCAGAGTTAGACCATGTAATTGGGCTGGACCGC
GTCATGAGCGAATCTGACTTCTCCAACCTCCCTTACCTACAATCTGTAGCCAAGGAGGCA
CTGAGGCTGCACCCTCCAACCCCATTGATGCTCCCCCATCGGGCCAATGCCAATGTTAAG
ATCGGTGGCTATGACATTCCAAAGGGATCCAATGTTCATGTAAATGTATGGGCTGTGGCA
CGTGATCCAGCGGTGTGGAAAGATCCAGAAGAGTTCCGACCCGAACGGTTCCTGGAGGAG
GATGTTGATATGAAGGGTCATGATTTTAGGCTACTGCCTTTTGGTGCTGGGAGACGTGTG
TGCCCAGGTGCACAACTTGGTATCAATTTGGTTACGTCAATGTTGGGTCACCTACTGCAC
CATTTTAACTGGGCTCCACCCGAGGGGGTTAACCCAGAGGATCTGGACATGTCGGAGAAC
CCTGGATTGGTCAGTTACATGAGGACTCCGCTACAGGCTATTCCTACTTCAAGGTTACCT
GCAAGCTTATACAAAAGGATGGCTGTGGATATTTAATTTTTAAGATGTTGGATTCTCCTT
TTAAGCTTTTGGATTACTTTGAATGAGATTGTAAAATGT