Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0040g00550.t01
CDS Infomation

cds chromosome:12X:8:11501609:11502936:1 gene:VIT_08s0040g00550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAAAGAGCAAGGTACTCATCATAGGAGGAACTGGGTACCTGGGGAGGAGATTGGTG
AAGGCAAGTCTAGCTCAAGCCCATGAAACATACGTTCTCCAAAGGCCGGATATGGGTGTG
GACATTGAGAAAGTCCAAATGCTGTTATCATTCAAGGAACAAGGAGCCCGTCTAGTGTTG
GGTTCTTTCAATGACCACCAGAGCCTTGTTGACGCCGTGAAGTTGGTAGATGTTGTCATT
TGTGCTATATCCGGTGTCCACATCCGGAGCCATCAAATCCTCCTTCAGCTCAAGCTTGTA
GATGCCATCAAAGAAGCCGGAAACATCAAGAGATTTTTACCCTCTGAGTTCGGCACTGAC
CCTGCAAGAATGGAGAATGCCATGGAACCAGGGAGGGTGACATTTGACGACAAAATGGTA
GTAAGGAAAGCGATCCAAGATGCTGGGATCCCATTCACCTACGTTTCTGCCAACTGCTTT
GCTGGTTACTTTCTTGGTGGCCTGTGCCAACCTGGAAGCATCCTTCCTTCAAGGGATCAT
GTGGTTTTACTAGGAGACGGCAACCAAAAAGCCATCTATGTGGATGAAGATGATATAGCC
ATGTACACTATCAAAACCATAGACGATCCACGAACCCTGAATAAAACACTCTACCTGAGG
CCACCCCAGAACATCCTTTCCCAAAGAGAAGTCGTGGAGGTCTGGGAGAAACTGATAGGG
AAACAGCTCCATAAGTCCTCAATCTCCAAGGAAGAATTTCTAGCTACCATGAAAACCCAA
AATTATGCAGAGCAAGTGGGATTAACCCATTACTATCATGTTTGCTATGAGGGGTGCCTT
GCCAATTTTGAAATAGGAGATGAGGCAGAGGAGGCTTCTCAGCTTTATCCTGAAATCAAC
TACACTACTGTTCATGAATACATGAAAAGATATCTGTGA

Peptide Sequence

PEP ID

VIT_08s0040g00550.t01
PEP Infomation

pep chromosome:12X:8:11501609:11502936:1 gene:VIT_08s0040g00550 transcript:VIT_08s0040g00550.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEKSKVLIIGGTGYLGRRLVKASLAQAHETYVLQRPDMGVDIEKVQMLLSFKEQGARLVL
GSFNDHQSLVDAVKLVDVVICAISGVHIRSHQILLQLKLVDAIKEAGNIKRFLPSEFGTD
PARMENAMEPGRVTFDDKMVVRKAIQDAGIPFTYVSANCFAGYFLGGLCQPGSILPSRDH
VVLLGDGNQKAIYVDEDDIAMYTIKTIDDPRTLNKTLYLRPPQNILSQREVVEVWEKLIG
KQLHKSSISKEEFLATMKTQNYAEQVGLTHYYHVCYEGCLANFEIGDEAEEASQLYPEIN
YTTVHEYMKRYL

Transcript Sequence

Transcript ID

VIT_08s0040g00550.t01
Transcript Infomation

cdna chromosome:12X:8:11501609:11502936:1 gene:VIT_08s0040g00550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGAGAGAGAGAGAGAGATATGGAAAAGAGCAAGGTACTCATCATAGGAGGAACTGGGT
ACCTGGGGAGGAGATTGGTGAAGGCAAGTCTAGCTCAAGCCCATGAAACATACGTTCTCC
AAAGGCCGGATATGGGTGTGGACATTGAGAAAGTCCAAATGCTGTTATCATTCAAGGAAC
AAGGAGCCCGTCTAGTGTTGGGTTCTTTCAATGACCACCAGAGCCTTGTTGACGCCGTGA
AGTTGGTAGATGTTGTCATTTGTGCTATATCCGGTGTCCACATCCGGAGCCATCAAATCC
TCCTTCAGCTCAAGCTTGTAGATGCCATCAAAGAAGCCGGAAACATCAAGAGATTTTTAC
CCTCTGAGTTCGGCACTGACCCTGCAAGAATGGAGAATGCCATGGAACCAGGGAGGGTGA
CATTTGACGACAAAATGGTAGTAAGGAAAGCGATCCAAGATGCTGGGATCCCATTCACCT
ACGTTTCTGCCAACTGCTTTGCTGGTTACTTTCTTGGTGGCCTGTGCCAACCTGGAAGCA
TCCTTCCTTCAAGGGATCATGTGGTTTTACTAGGAGACGGCAACCAAAAAGCCATCTATG
TGGATGAAGATGATATAGCCATGTACACTATCAAAACCATAGACGATCCACGAACCCTGA
ATAAAACACTCTACCTGAGGCCACCCCAGAACATCCTTTCCCAAAGAGAAGTCGTGGAGG
TCTGGGAGAAACTGATAGGGAAACAGCTCCATAAGTCCTCAATCTCCAAGGAAGAATTTC
TAGCTACCATGAAAACCCAAAATTATGCAGAGCAAGTGGGATTAACCCATTACTATCATG
TTTGCTATGAGGGGTGCCTTGCCAATTTTGAAATAGGAGATGAGGCAGAGGAGGCTTCTC
AGCTTTATCCTGAAATCAACTACACTACTGTTCATGAATACATGAAAAGATATCTGTGAT
CCCCAACATGTTTGCTCTACTTGCTGTTGAACCCTGTAATGCTTCTCTCTATGAGTCTAT
CACAATAAAGACTGTTATGTTATGA