Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0040g00540.t01
CDS Infomation

cds chromosome:12X:8:11490089:11491229:-1 gene:VIT_08s0040g00540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGTCATCGGACAATTTGGCTAGTGTTGATCCCTGGGTGTTTCGTCACACTTTCGCT
GACTCCTGGATATCAGAGGCATTTGCTCGCGACACCGAAACTCTGACCAAGGCTCTTCAG
AAATCTATTTCAAACCACCCCGACAACGTCGCATGCGACACGATCTCTCCCTTTCTGAAC
GATCTTCTTAAGCCCGAGACGGCTCAGACCCCCAGCGTTTCCGGCGTTTCGGGATCGGAC
CACGAGACTGCGCCGAAGCGCCGGACCGCGATTCCTGGGGCGGTCGGTGGAAAGATCACC
AAGCGGAAGTCTCGCGCGTCGAAGCGGTCTCAGACGACCTTCATCACCGCGGACCCTGCC
AACTTCCGCCAGATGGTGCAGCAGGTGACCGGCGTGAGATTCGGTAACTCACAGCTGCCG
GTGAACCCTATTTTGAAACCGGAACCTAAGAGGCCTGGGAACCGGTTGCTAGGTTGCTTG
CCAACTCTGGACACGTCGGAGTTTTTGCTTGATCATCATCACCAGCAGGTGATGGGCCCC
GCCACGGCCACTCAGGGGGCCATGACTTTTCAGCCCGTGGTGGCTGATGGCGGTGCCACT
GGTCTAGAATTCGAAACTTTCCCGAGCTTTCCCACTCTGGAGTCGTGGAAAGTCATGTGA

Peptide Sequence

PEP ID

VIT_08s0040g00540.t01
PEP Infomation

pep chromosome:12X:8:11490089:11491229:-1 gene:VIT_08s0040g00540 transcript:VIT_08s0040g00540.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASSDNLASVDPWVFRHTFADSWISEAFARDTETLTKALQKSISNHPDNVACDTISPFLN
DLLKPETAQTPSVSGVSGSDHETAPKRRTAIPGAVGGKITKRKSRASKRSQTTFITADPA
NFRQMVQQVTGVRFGNSQLPVNPILKPEPKRPGNRLLGCLPTLDTSEFLLDHHHQQVMGP
ATATQGAMTFQPVVADGGATGLEFETFPSFPTLESWKVM

Transcript Sequence

Transcript ID

VIT_08s0040g00540.t01
Transcript Infomation

cdna chromosome:12X:8:11490089:11491229:-1 gene:VIT_08s0040g00540 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCTTCCCCGCCTTATCCCCCTTGCTCTGCCTTAATCCCTCGCCGGACCTCTGTTTTTTC
CGGCGAAAATCCACTATTACTTGCGATTTCACCAATATCTAACCCTATTTCCACCAATAT
CTAACCCTATTTCTTCGCTCGCTTTTCATCCGCACTTCAATTTTTAGGCAATTTCGTATC
TTGGTGTGGTTTTTGGGTTTTGGAGAATAATTTTGGAGTATTAAGTATAAAATTTGGATA
ATCTAGGTTTTGAAAATGCGTTGAGGACTCTAGCATTCGAATTGTGCTTTCCTTTTCAGT
CTGCGCACGGTCTCTGTAAAAGGAAGAGCTGAGTACTAAGGTGAGAATGGCGTCATCGGA
CAATTTGGCTAGTGTTGATCCCTGGGTGTTTCGTCACACTTTCGCTGACTCCTGGATATC
AGAGGCATTTGCTCGCGACACCGAAACTCTGACCAAGGCTCTTCAGAAATCTATTTCAAA
CCACCCCGACAACGTCGCATGCGACACGATCTCTCCCTTTCTGAACGATCTTCTTAAGCC
CGAGACGGCTCAGACCCCCAGCGTTTCCGGCGTTTCGGGATCGGACCACGAGACTGCGCC
GAAGCGCCGGACCGCGATTCCTGGGGCGGTCGGTGGAAAGATCACCAAGCGGAAGTCTCG
CGCGTCGAAGCGGTCTCAGACGACCTTCATCACCGCGGACCCTGCCAACTTCCGCCAGAT
GGTGCAGCAGGTGACCGGCGTGAGATTCGGTAACTCACAGCTGCCGGTGAACCCTATTTT
GAAACCGGAACCTAAGAGGCCTGGGAACCGGTTGCTAGGTTGCTTGCCAACTCTGGACAC
GTCGGAGTTTTTGCTTGATCATCATCACCAGCAGGTGATGGGCCCCGCCACGGCCACTCA
GGGGGCCATGACTTTTCAGCCCGTGGTGGCTGATGGCGGTGCCACTGGTCTAGAATTCGA
AACTTTCCCGAGCTTTCCCACTCTGGAGTCGTGGAAAGTCATGTGATATTTATTCTTGTT
CTTTTTTTATGTACGTTATTTTTATTTTCTCTTAGCTCTGTTTTTTCGGCCCATGAGGCT
TTGTAGTTGGAGGCACATATATGGTTGGGGTTATGTTTATATTTTTGGGAGATTTGTTTG
G