Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0040g00480.t01
CDS Infomation

cds chromosome:12X:8:11427196:11429473:-1 gene:VIT_08s0040g00480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCGGAGAACCACCATGCCGCTAAGACCATTGGCTGCATGTCCGGCATTTTCCACTTC
GTCTGCAAATACCAACGCCGCCGGAAATTTCTCACTTTTGGTCGAAAGCACGACAAGAAT
GAAGCCTCGTCTCCCACAAAGTCCCAGACGTCGGCCAAAACCGCAGATGTAGATGCCGCC
GGCGTCCGGCGATTCTCATGCGACGTCCAGAGGAGCCCAACACTCCCGGCGGAAATCCGG
CGGTCAAATTCCGCCAATTCACCTGCGAACTTCCGAACTCCCCCAGCTTTAGTAGCGCGG
TTGATGGGGCTGAACGTAATTCCAGCGGCACCGGCATCGCCGGAATCTACGGCCGAGAAA
AGACAGAAGCTTCTGGGAGCGTTGGAGAAATGCGACGAGGATTTGAAGGCGCTTAAGAAG
ATCATCGATGCCGTTCGGTCGTCAGAAAACCTCCGGTCATCGCCGGCTGTGAAGGGCCTC
GATGGTGAAGATAAAGTTCGAACAACTTATGGAAGAGAGGAATGGTCATCAGGCGAGAGT
GAGTTAAGCAAAAAGGGCAAAAGTTGTTCGGAGTTTAACAGCGAGCAACCGAGTCCGGTG
TCTGTGCTCCACGAGTTCACTCGTCCACTTCCCAGCCCTTGCCCCAAAAAGCATCTCTAC
GGACGAGTTCATCCCCATCAGCATCAGCATCATCAGCAGCAGCAGCAGCAGAGGAGGAAG
CCAGGAGAAGAAGACATAATGAATCTATGCTTCTTCAGTAGGCTCAGCAGCGAATCGACG
GAGGCAAAGGAGGAGAAGTCGGAGTCGGCAGTGTGCGGAAGCAAGGCAATGGTGGAGAGT
GTAGAGGAAGTGTGTAGGGACATTGCATGGGGAGAGAGGAGGGAGGTTGGGAGACTAGGG
TTGGTTTTACAGGACTACATTTGCAGAGACTTAATTGAAGAGACTGTCGCTGAGATGGGT
TATGTTTCCTCCATGTATTCACTCCCCTTTGAGGCCTGCAAGAGAAAACTTTGTTTCTAG

Peptide Sequence

PEP ID

VIT_08s0040g00480.t01
PEP Infomation

pep chromosome:12X:8:11427196:11429473:-1 gene:VIT_08s0040g00480 transcript:VIT_08s0040g00480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPENHHAAKTIGCMSGIFHFVCKYQRRRKFLTFGRKHDKNEASSPTKSQTSAKTADVDAA
GVRRFSCDVQRSPTLPAEIRRSNSANSPANFRTPPALVARLMGLNVIPAAPASPESTAEK
RQKLLGALEKCDEDLKALKKIIDAVRSSENLRSSPAVKGLDGEDKVRTTYGREEWSSGES
ELSKKGKSCSEFNSEQPSPVSVLHEFTRPLPSPCPKKHLYGRVHPHQHQHHQQQQQQRRK
PGEEDIMNLCFFSRLSSESTEAKEEKSESAVCGSKAMVESVEEVCRDIAWGERREVGRLG
LVLQDYICRDLIEETVAEMGYVSSMYSLPFEACKRKLCF

Transcript Sequence

Transcript ID

VIT_08s0040g00480.t01
Transcript Infomation

cdna chromosome:12X:8:11427196:11429473:-1 gene:VIT_08s0040g00480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCGGAGAACCACCATGCCGCTAAGACCATTGGCTGCATGTCCGGCATTTTCCACTTC
GTCTGCAAATACCAACGCCGCCGGAAATTTCTCACTTTTGGTCGAAAGCACGACAAGAAT
GAAGCCTCGTCTCCCACAAAGTCCCAGACGTCGGCCAAAACCGCAGATGTAGATGCCGCC
GGCGTCCGGCGATTCTCATGCGACGTCCAGAGGAGCCCAACACTCCCGGCGGAAATCCGG
CGGTCAAATTCCGCCAATTCACCTGCGAACTTCCGAACTCCCCCAGCTTTAGTAGCGCGG
TTGATGGGGCTGAACGTAATTCCAGCGGCACCGGCATCGCCGGAATCTACGGCCGAGAAA
AGACAGAAGCTTCTGGGAGCGTTGGAGAAATGCGACGAGGATTTGAAGGCGCTTAAGAAG
ATCATCGATGCCGTTCGGTCGTCAGAAAACCTCCGGTCATCGCCGGCTGTGAAGGGCCTC
GATGGTGAAGATAAAGTTCGAACAACTTATGGAAGAGAGGAATGGTCATCAGGCGAGAGT
GAGTTAAGCAAAAAGGGCAAAAGTTGTTCGGAGTTTAACAGCGAGCAACCGAGTCCGGTG
TCTGTGCTCCACGAGTTCACTCGTCCACTTCCCAGCCCTTGCCCCAAAAAGCATCTCTAC
GGACGAGTTCATCCCCATCAGCATCAGCATCATCAGCAGCAGCAGCAGCAGAGGAGGAAG
CCAGGAGAAGAAGACATAATGAATCTATGCTTCTTCAGTAGGCTCAGCAGCGAATCGACG
GAGGCAAAGGAGGAGAAGTCGGAGTCGGCAGTGTGCGGAAGCAAGGCAATGGTGGAGAGT
GTAGAGGAAGTGTGTAGGGACATTGCATGGGGAGAGAGGAGGGAGGTTGGGAGACTAGGG
TTGGTTTTACAGGACTACATTTGCAGAGACTTAATTGAAGAGACTGTCGCTGAGATGGGT
TATGTTTCCTCCATGTATTCACTCCCCTTTGAGGCCTGCAAGAGAAAACTTTGTTTCTAG
TTCACTTTTCATTTAAATATCTTTATACTCTCATTATTTTAA