Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0032g00240.t01
CDS Infomation

cds chromosome:12X:8:3263121:3264913:1 gene:VIT_08s0032g00240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGTTTCCCTCTTCTTTCCTCTTTCCCTTTCTTCTCTTTCTATTTATCCTATTCAAA
GTAAGTAAGAAATCCAAACCCCAAATCTCTATTCCAAAGCGGCCTCCAGGACCATGGAAG
CTACCCCTGATTGGAAACTTGCACCAACTTGTTGGTTCACTTCCTCATCACTCACTGAGG
GACTTGGCAAAGAAATATGGACCTCTCATGCACCTACAACTTGGCCAAGTCTCCATGCTT
GTAGTCTCATCGCCAGAGATTGCCAAAGAGGTTATGAAAACCCATGACATCAACTTTGCC
CAAAGGCCCCATCTTCTTGCTACCAGGATCGTATCTTATGATTCTACTGACGTCGCTTTT
TCTCCATATGGTGATTACTGGAGGCAACTCCGGAAAATCTGTGTGGTCGAACTTCTCAGT
GCCAAGCGTGTTAAATCATTCCAGGTGATTAGGAAGGAGGAGGTTTCAAAACTCATCAGA
ATCATCAACTCTAGTTCAAGATTTCCAATCAATCTGAGGGACAGAATTTCGGCTTTTACT
TATTCGGCAATCTCAAGAGCGGCACTGGGGAAAGAATGCAAAGACCATGACCCATTGACA
GCGGCTTTTGGGGAAAGCACAAAGCTGGCATCAGGTTTCTGTCTTGCCGATTTGTACCCT
TCTGTTAAATGGATTCCCCTGGTCAGCGGAGTGAGGCATAAACTTGAGAAGGTGCAGCAG
AGGATTGATGGAATACTTCAGATTGTTGTCGATGAGCACAGAGAGAGAATGAAAACAACA
ACAGGCAAGCTAGAAGAAGAGAAAGACTTGGTTGATGTGCTTTTAAAGCTTCAACAGGAT
GGTGACCTTGAACTTCCCTTAACCGACGACAATATTAAAGCAGTCATCTTGGACATTTTC
GGTGGGGGAGGGGATACAGTATCGACAGCAGTGGAGTGGACAATGGCGGAAATGATGAAA
AACCCTGAAGTCATGAAGAAGGCACAAGCTGAGGTAAGGCGGGTCTTTGATGGAAAAGGG
AATGTGGATGAAGCGGGTATTGATGAATTGAAATTCTTAAAAGCGGTAATCTCTGAAACC
TTGAGGCTACACCCTCCTTTCCCATTGTTGCTTCCAAGGGAATGTAGGGAGAAGTGTAAG
ATTAATGGATATGAGGTACCTGTGAAGACCAGAGTGGTCATTAATGCATGGGCAATTGGA
CGGTACCCCGATTGTTGGAGTGAAGCTGAGAGATTTTACCCAGAGAGATTCCTTGATAGT
TCAATTGATTACAAGGGTGCTGATTTTGGGTTTATTCCGTTTGGTAGTGGAAGGAGGATA
TGTCCAGGCATACTGTTTGGCATACCTGTGATTGAGCTGCCACTAGCCCAGTTGCTGTTC
CATTTTGACTGGAAACTTCCCAATGGAATGAGGCCTGAGGATCTAGACATGACTGAGGTT
CATGGGTTAGCAGTTAGAAAAAAACATAATCTGCACTTAATTCCCATTCCTTATAGTCCA
TTGACTGTTGGGTGA

Peptide Sequence

PEP ID

VIT_08s0032g00240.t01
PEP Infomation

pep chromosome:12X:8:3263121:3264913:1 gene:VIT_08s0032g00240 transcript:VIT_08s0032g00240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEFPSSFLFPFLLFLFILFKVSKKSKPQISIPKRPPGPWKLPLIGNLHQLVGSLPHHSLR
DLAKKYGPLMHLQLGQVSMLVVSSPEIAKEVMKTHDINFAQRPHLLATRIVSYDSTDVAF
SPYGDYWRQLRKICVVELLSAKRVKSFQVIRKEEVSKLIRIINSSSRFPINLRDRISAFT
YSAISRAALGKECKDHDPLTAAFGESTKLASGFCLADLYPSVKWIPLVSGVRHKLEKVQQ
RIDGILQIVVDEHRERMKTTTGKLEEEKDLVDVLLKLQQDGDLELPLTDDNIKAVILDIF
GGGGDTVSTAVEWTMAEMMKNPEVMKKAQAEVRRVFDGKGNVDEAGIDELKFLKAVISET
LRLHPPFPLLLPRECREKCKINGYEVPVKTRVVINAWAIGRYPDCWSEAERFYPERFLDS
SIDYKGADFGFIPFGSGRRICPGILFGIPVIELPLAQLLFHFDWKLPNGMRPEDLDMTEV
HGLAVRKKHNLHLIPIPYSPLTVG

Transcript Sequence

Transcript ID

VIT_08s0032g00240.t01
Transcript Infomation

cdna chromosome:12X:8:3263121:3264913:1 gene:VIT_08s0032g00240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCATCAACTTCACTGCTTTCTCCATGGAGTTTCCCTCTTCTTTCCTCTTTCCCTTTCTT
CTCTTTCTATTTATCCTATTCAAAGTAAGTAAGAAATCCAAACCCCAAATCTCTATTCCA
AAGCGGCCTCCAGGACCATGGAAGCTACCCCTGATTGGAAACTTGCACCAACTTGTTGGT
TCACTTCCTCATCACTCACTGAGGGACTTGGCAAAGAAATATGGACCTCTCATGCACCTA
CAACTTGGCCAAGTCTCCATGCTTGTAGTCTCATCGCCAGAGATTGCCAAAGAGGTTATG
AAAACCCATGACATCAACTTTGCCCAAAGGCCCCATCTTCTTGCTACCAGGATCGTATCT
TATGATTCTACTGACGTCGCTTTTTCTCCATATGGTGATTACTGGAGGCAACTCCGGAAA
ATCTGTGTGGTCGAACTTCTCAGTGCCAAGCGTGTTAAATCATTCCAGGTGATTAGGAAG
GAGGAGGTTTCAAAACTCATCAGAATCATCAACTCTAGTTCAAGATTTCCAATCAATCTG
AGGGACAGAATTTCGGCTTTTACTTATTCGGCAATCTCAAGAGCGGCACTGGGGAAAGAA
TGCAAAGACCATGACCCATTGACAGCGGCTTTTGGGGAAAGCACAAAGCTGGCATCAGGT
TTCTGTCTTGCCGATTTGTACCCTTCTGTTAAATGGATTCCCCTGGTCAGCGGAGTGAGG
CATAAACTTGAGAAGGTGCAGCAGAGGATTGATGGAATACTTCAGATTGTTGTCGATGAG
CACAGAGAGAGAATGAAAACAACAACAGGCAAGCTAGAAGAAGAGAAAGACTTGGTTGAT
GTGCTTTTAAAGCTTCAACAGGATGGTGACCTTGAACTTCCCTTAACCGACGACAATATT
AAAGCAGTCATCTTGGACATTTTCGGTGGGGGAGGGGATACAGTATCGACAGCAGTGGAG
TGGACAATGGCGGAAATGATGAAAAACCCTGAAGTCATGAAGAAGGCACAAGCTGAGGTA
AGGCGGGTCTTTGATGGAAAAGGGAATGTGGATGAAGCGGGTATTGATGAATTGAAATTC
TTAAAAGCGGTAATCTCTGAAACCTTGAGGCTACACCCTCCTTTCCCATTGTTGCTTCCA
AGGGAATGTAGGGAGAAGTGTAAGATTAATGGATATGAGGTACCTGTGAAGACCAGAGTG
GTCATTAATGCATGGGCAATTGGACGGTACCCCGATTGTTGGAGTGAAGCTGAGAGATTT
TACCCAGAGAGATTCCTTGATAGTTCAATTGATTACAAGGGTGCTGATTTTGGGTTTATT
CCGTTTGGTAGTGGAAGGAGGATATGTCCAGGCATACTGTTTGGCATACCTGTGATTGAG
CTGCCACTAGCCCAGTTGCTGTTCCATTTTGACTGGAAACTTCCCAATGGAATGAGGCCT
GAGGATCTAGACATGACTGAGGTTCATGGGTTAGCAGTTAGAAAAAAACATAATCTGCAC
TTAATTCCCATTCCTTATAGTCCATTGACTGTTGGGTGAGACCACCCAGAAGAAGGATTC
CTACTCCGCACTAAGTTTATATTAAAAATGCTCCAGAAGCCGCTGTGATGTAATGCAGTA
ATGCTGCAGAGGTTGTTTCCTGCATCTTTCAACTTTTTCTAGAATATTTAATAATGTAAA
CTGTGTTCAATAAACAATAATAATTCAGAGGCTAA