Gene sequences

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Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_08s0007g08940.t01
CDS Infomation	cds chromosome:12X:8:22258184:22270728:-1 gene:VIT_08s0007g08940 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore protein [Source:UniProtKB/TrEMBL;Acc:D7THT1]
Sequence	ATGGCCACCGACTCCGACATGAGTTCCTGGACCGATCTCCTCCACTCCTCCACGAAGCTT CTCGAACAAGCCGCTCCTTCGGCTCAGTTCCCTCCTCTCCAGAGGAACTTAGACCAATTA GAAGCGTTATCTAAGAAGCTAAAGTCAAAAACCCTAAGAGCTGAAGCTCCATCACAATCC GTTGCAGCCACAAGGTTATTGGCACGTGAGGGACTAAATGCAGAACAGCTTGCTCGGGAT CTCAAGTCTTTTGAGTTGAAGACAACATTTGAGGATGTTTTCCCTGCTGAGGCAACAAGT GTCGAGGAATACCTGCAGCAGGTTCATGAGATGGCAATAGTTTCCGCTATCCAGGAAGCA CAGAAAGATAACCTTAAAAGTTTTAATGATTACATGATGAAAGTTATGGAGGAGGATTGG CAAAAGGAAAAAAGGGATTTCCTTCAAAGCTTGAGCCGCATATCAACATTGCCCAAGACT AATATTAGTGATTCAAGCACTGGGGCTACTCGTCCAGGTCAAATTGCATCCATGATTTCC AGTCCTCAGGTTTCATCTGGTCTGTCTAGTATGGAGCTTGTACCTCTAGCTAACAAGCCT GTCCTCGAGAAAAAAACTTCTGTTTATGCTGAGGTTGTGAAGAATCTCAACAGTGCAAGA GAGCGTGGCTTACCATTTAAGCCTGCTACAGCTTTCAAGGGTGCTTATGATAGTTTGGGC CTTGAGACATCTGGTGGCAAATCTGTTAACATGCAGAAGATTTGGCACCTGATTCAGACA TTAATGGGTGAGGATACAGCTGCTCAATGGAATGTTTCAAAAAAAATGTCATTAGTAATT GGTGCTAGGCGCCACCTCGAATGGGGACATGAGAAATATATGATAGATACGATACAAAGT CATCCTGCACAGGCTGCTCTTGGTGGGGTTGTTGGAAATCTGCAAAGAATCCATGCCTTT CTTCGGATTCGTTTGAGAGACTATGGGGTTCTAGATTTTGATGCAGGTGATGCTCGTAGA CAACCTCCTGTTGATACCACTTGGCAGCAGATTTATTTTTGCTTGAGGACTGGGTATTAC GAGGAAGCAATAGAGGTTGCCAGATCATCTCGTGTTTCAAATCAGTTTGCTTCTCAGCTC ACAGAATGGATTACTACAAGAGGTATGGTATCAGCAGAGATTGCAGCAGTTGCTTCAGAG GAATGCGATAAAATGTTAAGAATGGGCGATCGTGTGGGTCGTGCAGCATATGACAAAAAA AGGTTGCTGCTTTATGCTATCATATCTGGTTCTCGCAGGCATATTGATCGCTTGCTCAGA GATCTTCCAACTCTTTTCAATACCATAGAGGATTTCTTGTGGTTCAAATTGTCAGCTGTG CGGGACTGTCCAGGTGGATCCTCATCTGTTGTCCTGAATGAGGGCTTGGTACCATACAGT TTGGATGATTTGCAGAATTACCTAAATAAATTTGAGCCATCATATTATACAAAAAATGGA AAGGACCCTCTGGTATATCCATATGTTTTACTTCTAAGTATCCAGTTGCTACCAGCAGTC CTATACTTGTCTAAGGAAATGGGAGTTGAAGGGTATAATGTTGATGCTACCCATATATCA ATTGTTCTAGCAGACCATGGGGTCCTTTCAGAAGGTGCTGGGGTAGGACAGAAATTGGGG GTGATGGATGCTTTTGCAGAGGCATCTAGCATAATCCGGCAGTACGGATCAGTGTATTTA CGTGCTGGTGATCTTTCAACAGCATTAGAATATTATGCACAAGCTGCTGCTGCAGTGGGA GGTGGACAGTTGTCATGGACTGGAAGGGGCAATATAGATCAGCAATGGCAGAGAAATCTG ATGCTGAAGCAACTCCTCACTGAACTGTTATTAAGGGATGGTGGGATTTATCTTTTACTT GGTCCGAGAGGTGCTGGAGAAGAAGGTGAACTGGCTCGTTTTCTGACTGATGTAAAAGCA AGACAGCAATTTCTGCTTGAAGCTTCTCGCCAGTGTCAGGATGCTGGGCTGTATGATCAA TCTATAGAAATTCAGAAGAGAATTGGGGCATTTTCAATGGCGTTGGATACAATTAATAAG TGCCTCTCTGAAGCAGTTTGTGCTTTGGCTCGTGGTAGATTGGATGGTGAGAGCCGAACT GCTGGGCTAATTCAGTCTGGCAATGAGATCCTGGAGACATACAAATATTTTCCTGAAGTC AGTCTTCAAGAGAGGGAACATGTTATGGAGCAACAGACTGTACTAAGAGAGCTTGAGGCA ATATTGTCTATCCATAAGTTGGCGAGAGTGGGCCATTATCTAGATGCCCTGAGGGAGGTT GCTAAACTTCCATTTCTTCCACTTGATCCACGAGCGCCAGATACCACACCTGATGTGTTT CAGAATTTATCTCCCCATGTCCAAGCTTGTGTGCCTGACCTTCTGAAGATTGCTCTCAGT TGTCTGGACTATGTGACGGATACTGATGGATCACTTCGGGCCTTGAGGACTAAGATTGCC AATTTTCTCGCAAACAATTTGAATAGGAACTGGCCTCGTGATTTGTACGAAAAGGTTGCT CGAACGTTGTGA

Peptide Sequence

PEP ID	VIT_08s0007g08940.t01
PEP Infomation	pep chromosome:12X:8:22258184:22270728:-1 gene:VIT_08s0007g08940 transcript:VIT_08s0007g08940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore protein [Source:UniProtKB/TrEMBL;Acc:D7THT1]
Sequence	MATDSDMSSWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTLRAEAPSQS VAATRLLAREGLNAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAIVSAIQEA QKDNLKSFNDYMMKVMEEDWQKEKRDFLQSLSRISTLPKTNISDSSTGATRPGQIASMIS SPQVSSGLSSMELVPLANKPVLEKKTSVYAEVVKNLNSARERGLPFKPATAFKGAYDSLG LETSGGKSVNMQKIWHLIQTLMGEDTAAQWNVSKKMSLVIGARRHLEWGHEKYMIDTIQS HPAQAALGGVVGNLQRIHAFLRIRLRDYGVLDFDAGDARRQPPVDTTWQQIYFCLRTGYY EEAIEVARSSRVSNQFASQLTEWITTRGMVSAEIAAVASEECDKMLRMGDRVGRAAYDKK RLLLYAIISGSRRHIDRLLRDLPTLFNTIEDFLWFKLSAVRDCPGGSSSVVLNEGLVPYS LDDLQNYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAVLYLSKEMGVEGYNVDATHIS IVLADHGVLSEGAGVGQKLGVMDAFAEASSIIRQYGSVYLRAGDLSTALEYYAQAAAAVG GGQLSWTGRGNIDQQWQRNLMLKQLLTELLLRDGGIYLLLGPRGAGEEGELARFLTDVKA RQQFLLEASRQCQDAGLYDQSIEIQKRIGAFSMALDTINKCLSEAVCALARGRLDGESRT AGLIQSGNEILETYKYFPEVSLQEREHVMEQQTVLRELEAILSIHKLARVGHYLDALREV AKLPFLPLDPRAPDTTPDVFQNLSPHVQACVPDLLKIALSCLDYVTDTDGSLRALRTKIA NFLANNLNRNWPRDLYEKVARTL

Transcript Sequence

Transcript ID	VIT_08s0007g08940.t01
Transcript Infomation	cdna chromosome:12X:8:22258184:22270728:-1 gene:VIT_08s0007g08940 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nuclear pore protein [Source:UniProtKB/TrEMBL;Acc:D7THT1]
Sequence	AGCAACCATGGCCACCGACTCCGACATGAGTTCCTGGACCGATCTCCTCCACTCCTCCAC GAAGCTTCTCGAACAAGCCGCTCCTTCGGCTCAGTTCCCTCCTCTCCAGAGGAACTTAGA CCAATTAGAAGCGTTATCTAAGAAGCTAAAGTCAAAAACCCTAAGAGCTGAAGCTCCATC ACAATCCGTTGCAGCCACAAGGTTATTGGCACGTGAGGGACTAAATGCAGAACAGCTTGC TCGGGATCTCAAGTCTTTTGAGTTGAAGACAACATTTGAGGATGTTTTCCCTGCTGAGGC AACAAGTGTCGAGGAATACCTGCAGCAGGTTCATGAGATGGCAATAGTTTCCGCTATCCA GGAAGCACAGAAAGATAACCTTAAAAGTTTTAATGATTACATGATGAAAGTTATGGAGGA GGATTGGCAAAAGGAAAAAAGGGATTTCCTTCAAAGCTTGAGCCGCATATCAACATTGCC CAAGACTAATATTAGTGATTCAAGCACTGGGGCTACTCGTCCAGGTCAAATTGCATCCAT GATTTCCAGTCCTCAGGTTTCATCTGGTCTGTCTAGTATGGAGCTTGTACCTCTAGCTAA CAAGCCTGTCCTCGAGAAAAAAACTTCTGTTTATGCTGAGGTTGTGAAGAATCTCAACAG TGCAAGAGAGCGTGGCTTACCATTTAAGCCTGCTACAGCTTTCAAGGGTGCTTATGATAG TTTGGGCCTTGAGACATCTGGTGGCAAATCTGTTAACATGCAGAAGATTTGGCACCTGAT TCAGACATTAATGGGTGAGGATACAGCTGCTCAATGGAATGTTTCAAAAAAAATGTCATT AGTAATTGGTGCTAGGCGCCACCTCGAATGGGGACATGAGAAATATATGATAGATACGAT ACAAAGTCATCCTGCACAGGCTGCTCTTGGTGGGGTTGTTGGAAATCTGCAAAGAATCCA TGCCTTTCTTCGGATTCGTTTGAGAGACTATGGGGTTCTAGATTTTGATGCAGGTGATGC TCGTAGACAACCTCCTGTTGATACCACTTGGCAGCAGATTTATTTTTGCTTGAGGACTGG GTATTACGAGGAAGCAATAGAGGTTGCCAGATCATCTCGTGTTTCAAATCAGTTTGCTTC TCAGCTCACAGAATGGATTACTACAAGAGGTATGGTATCAGCAGAGATTGCAGCAGTTGC TTCAGAGGAATGCGATAAAATGTTAAGAATGGGCGATCGTGTGGGTCGTGCAGCATATGA CAAAAAAAGGTTGCTGCTTTATGCTATCATATCTGGTTCTCGCAGGCATATTGATCGCTT GCTCAGAGATCTTCCAACTCTTTTCAATACCATAGAGGATTTCTTGTGGTTCAAATTGTC AGCTGTGCGGGACTGTCCAGGTGGATCCTCATCTGTTGTCCTGAATGAGGGCTTGGTACC ATACAGTTTGGATGATTTGCAGAATTACCTAAATAAATTTGAGCCATCATATTATACAAA AAATGGAAAGGACCCTCTGGTATATCCATATGTTTTACTTCTAAGTATCCAGTTGCTACC AGCAGTCCTATACTTGTCTAAGGAAATGGGAGTTGAAGGGTATAATGTTGATGCTACCCA TATATCAATTGTTCTAGCAGACCATGGGGTCCTTTCAGAAGGTGCTGGGGTAGGACAGAA ATTGGGGGTGATGGATGCTTTTGCAGAGGCATCTAGCATAATCCGGCAGTACGGATCAGT GTATTTACGTGCTGGTGATCTTTCAACAGCATTAGAATATTATGCACAAGCTGCTGCTGC AGTGGGAGGTGGACAGTTGTCATGGACTGGAAGGGGCAATATAGATCAGCAATGGCAGAG AAATCTGATGCTGAAGCAACTCCTCACTGAACTGTTATTAAGGGATGGTGGGATTTATCT TTTACTTGGTCCGAGAGGTGCTGGAGAAGAAGGTGAACTGGCTCGTTTTCTGACTGATGT AAAAGCAAGACAGCAATTTCTGCTTGAAGCTTCTCGCCAGTGTCAGGATGCTGGGCTGTA TGATCAATCTATAGAAATTCAGAAGAGAATTGGGGCATTTTCAATGGCGTTGGATACAAT TAATAAGTGCCTCTCTGAAGCAGTTTGTGCTTTGGCTCGTGGTAGATTGGATGGTGAGAG CCGAACTGCTGGGCTAATTCAGTCTGGCAATGAGATCCTGGAGACATACAAATATTTTCC TGAAGTCAGTCTTCAAGAGAGGGAACATGTTATGGAGCAACAGACTGTACTAAGAGAGCT TGAGGCAATATTGTCTATCCATAAGTTGGCGAGAGTGGGCCATTATCTAGATGCCCTGAG GGAGGTTGCTAAACTTCCATTTCTTCCACTTGATCCACGAGCGCCAGATACCACACCTGA TGTGTTTCAGAATTTATCTCCCCATGTCCAAGCTTGTGTGCCTGACCTTCTGAAGATTGC TCTCAGTTGTCTGGACTATGTGACGGATACTGATGGATCACTTCGGGCCTTGAGGACTAA GATTGCCAATTTTCTCGCAAACAATTTGAATAGGAACTGGCCTCGTGATTTGTACGAAAA GGTTGCTCGAACGTTGTGAACGAACAAAGGATAGGTAGTTTGAGATGCCACTTCCTTAGT CAAGCAACAAAATGTGGCAGTTTGAGATACCTGCATT