Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g08290.t01
CDS Infomation

cds chromosome:12X:8:21627860:21639830:1 gene:VIT_08s0007g08290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGATGGCTGTCGCATTTCACAAACCTCTCAATTCTCGTCTCTCCATCAACCCTAAC
CCTAACTCTAGGAGAGGCCTTTGTTTCTCGTCATCTCTGTTATTCAATTGCAGATTGCCT
TCATCTCCAATTGCCACAACACCATTCAAATTCCCCTTCAGAAATTCGGTTCCCGCTCCG
ATCAAATGCTCTATTTCCACAGAAACTGCCAAAGAGAAAAAGAGGCAATTAATGCGAAGA
AGAGACATAAGGAACATTGCGATTGTTGCTCATGTAGATCATGGAAAGACTACATTAGTG
GATGCAATGCTGAAGCAAGCAAAGGTATTTCGTGATAACCAATTTGTACAGGAAAGAATA
ATGGACTCAAATGATCTAGAGCGTGAAAGGGGAATTACAATACTTAGCAAAAACACATCA
ATCGGCTATAAGGATACAAAAATAAACATTATTGATACTCCTGGCCACTCTGATTTTGGA
GGCGAAGTGGAACGCATACTCAATATGGTGGAGGGGGTTCTTCTAGTGGTAGATTCTGTT
GAGGGGCCGATGCCACAAACAAGATTTGTTTTAAAGAAGGCTCTGGAATTTGGGCATGCT
GTTGTTGTAGTTGTTAATAAGATCGATAGGCCTTCTGCTCGCCCAGATTATGTCATCAAT
GCCACTTTTGAACTCTTTATTGAACTGAATGCTACAGATGAACAGTGCGATTTCCAAGCG
ATATATGCAAGTGGTATCAAAGGAAAGGCTGGACTATCTCCTGAAAATTTGGCAGATGAT
CTTGGACCACTTTTTGAATCTATAATTAGATGTATACCTGGACCACGAATTGACAAAGAT
GGTGCACTACAGATGCTTGCTACAAATATTGAATATGATGAACATAAAGGTCGGATTGCT
ATTGGACGCGTTCATGCTGGGGTTTTGCAGAAGGGAATGGATGTGAGGGTATGCACCACA
GAAGACGCTTGTAGATATGCAAGAGTCAGTGAACTTTTTGTATATGAAAAATTCAGTAGG
GTTCCTGCAGAAACTGTGGAAGCTGGTGATATATGTGCTGTTTGTGGTATTGATGACATT
CAGATTGGAGAGACAATTGCCGACAAAAGTTCTGGGAAGCCATTACCTGCCATTAAGGTA
GAAGAGCCAACAGTGAAAATGGCTTTTTCTATCAATACTTCACCTTTTGTTGGCCGTGAG
GGAAAGTATGTTACCAGTAGAAACCTAAGAGACCGGCTCTATCGTGAGATTGAGCGGAAT
TTGGCTATGAGAGTTGAAGATGGTGAAACTGCAGATACATTCATTGTTAGTGGGCGGGGT
ACTTTACATATTACCATACTGATAGAAAACATGCGAAGGGAAGGATATGAATTCATGGTG
GGGCCCCCAAAAGTTATCAACAAAAGAGTGGATGACAAGTTGCAGGAACCTTTTGAGATT
GCCACTGTGGAGGTACCAGAAGAACACATGGGTTCTGTGGTTGAACTTCTTGGCAAAAGG
CGTGGGCAGATGTTTGATATGCAAGGAGTTGGGTCTGAGGGAACTACACTACTTAAATAC
AAGATACCAACCCGTGGCCTTCTTGGATTGCGAAATGCAATTTTAACAGCTTCTCGAGGC
ACTGCAATTCTCAATACCATATTTGATAGCTATGGACCTTGGGCTGGTGATATTACTACC
AGGGATCAGGGTTCATTGGTTGCATTCGAGGAGGGAAGCACAACATCTTATGCCCTTTGT
AGTTCACAGGAGAGAGGGCAGATGTTCGTTGGACCTGGAGTTGACGTTTATAAAGGGCAA
ATTGTAGGCATTCATCAGCGTCCTGGTGACTTATCCCTAAATGTGTGCAAGAAGAAGGCT
GCAACAAATGTGCGGTCCAACAAGGAACAAACTGTGGTTCTTGACACACCTTTGGATTAC
AGTCTAGATGACTGCATAGAGTACATTCAAGAAGATGAGATGGTGGAAGTCACTCCTTTA
AGCATCCGAATGTGCAAGAATCCAAAACTTGCAAAGAAGACAAGGTAA

Peptide Sequence

PEP ID

VIT_08s0007g08290.t01
PEP Infomation

pep chromosome:12X:8:21627860:21639830:1 gene:VIT_08s0007g08290 transcript:VIT_08s0007g08290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEMAVAFHKPLNSRLSINPNPNSRRGLCFSSSLLFNCRLPSSPIATTPFKFPFRNSVPAP
IKCSISTETAKEKKRQLMRRRDIRNIAIVAHVDHGKTTLVDAMLKQAKVFRDNQFVQERI
MDSNDLERERGITILSKNTSIGYKDTKINIIDTPGHSDFGGEVERILNMVEGVLLVVDSV
EGPMPQTRFVLKKALEFGHAVVVVVNKIDRPSARPDYVINATFELFIELNATDEQCDFQA
IYASGIKGKAGLSPENLADDLGPLFESIIRCIPGPRIDKDGALQMLATNIEYDEHKGRIA
IGRVHAGVLQKGMDVRVCTTEDACRYARVSELFVYEKFSRVPAETVEAGDICAVCGIDDI
QIGETIADKSSGKPLPAIKVEEPTVKMAFSINTSPFVGREGKYVTSRNLRDRLYREIERN
LAMRVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKRVDDKLQEPFEI
ATVEVPEEHMGSVVELLGKRRGQMFDMQGVGSEGTTLLKYKIPTRGLLGLRNAILTASRG
TAILNTIFDSYGPWAGDITTRDQGSLVAFEEGSTTSYALCSSQERGQMFVGPGVDVYKGQ
IVGIHQRPGDLSLNVCKKKAATNVRSNKEQTVVLDTPLDYSLDDCIEYIQEDEMVEVTPL
SIRMCKNPKLAKKTR

Transcript Sequence

Transcript ID

VIT_08s0007g08290.t01
Transcript Infomation

cdna chromosome:12X:8:21627860:21639830:1 gene:VIT_08s0007g08290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTGTGTCGTGGTTTCAATAACAACCTCATTTCTCAAATCCCTTCCGTTGCTTTAAACTC
TCAGAGTTCCCCTCAGAAGTACTGTGAGGCTTGAGAGCAATGGAGATGGCTGTCGCATTT
CACAAACCTCTCAATTCTCGTCTCTCCATCAACCCTAACCCTAACTCTAGGAGAGGCCTT
TGTTTCTCGTCATCTCTGTTATTCAATTGCAGATTGCCTTCATCTCCAATTGCCACAACA
CCATTCAAATTCCCCTTCAGAAATTCGGTTCCCGCTCCGATCAAATGCTCTATTTCCACA
GAAACTGCCAAAGAGAAAAAGAGGCAATTAATGCGAAGAAGAGACATAAGGAACATTGCG
ATTGTTGCTCATGTAGATCATGGAAAGACTACATTAGTGGATGCAATGCTGAAGCAAGCA
AAGGTATTTCGTGATAACCAATTTGTACAGGAAAGAATAATGGACTCAAATGATCTAGAG
CGTGAAAGGGGAATTACAATACTTAGCAAAAACACATCAATCGGCTATAAGGATACAAAA
ATAAACATTATTGATACTCCTGGCCACTCTGATTTTGGAGGCGAAGTGGAACGCATACTC
AATATGGTGGAGGGGGTTCTTCTAGTGGTAGATTCTGTTGAGGGGCCGATGCCACAAACA
AGATTTGTTTTAAAGAAGGCTCTGGAATTTGGGCATGCTGTTGTTGTAGTTGTTAATAAG
ATCGATAGGCCTTCTGCTCGCCCAGATTATGTCATCAATGCCACTTTTGAACTCTTTATT
GAACTGAATGCTACAGATGAACAGTGCGATTTCCAAGCGATATATGCAAGTGGTATCAAA
GGAAAGGCTGGACTATCTCCTGAAAATTTGGCAGATGATCTTGGACCACTTTTTGAATCT
ATAATTAGATGTATACCTGGACCACGAATTGACAAAGATGGTGCACTACAGATGCTTGCT
ACAAATATTGAATATGATGAACATAAAGGTCGGATTGCTATTGGACGCGTTCATGCTGGG
GTTTTGCAGAAGGGAATGGATGTGAGGGTATGCACCACAGAAGACGCTTGTAGATATGCA
AGAGTCAGTGAACTTTTTGTATATGAAAAATTCAGTAGGGTTCCTGCAGAAACTGTGGAA
GCTGGTGATATATGTGCTGTTTGTGGTATTGATGACATTCAGATTGGAGAGACAATTGCC
GACAAAAGTTCTGGGAAGCCATTACCTGCCATTAAGGTAGAAGAGCCAACAGTGAAAATG
GCTTTTTCTATCAATACTTCACCTTTTGTTGGCCGTGAGGGAAAGTATGTTACCAGTAGA
AACCTAAGAGACCGGCTCTATCGTGAGATTGAGCGGAATTTGGCTATGAGAGTTGAAGAT
GGTGAAACTGCAGATACATTCATTGTTAGTGGGCGGGGTACTTTACATATTACCATACTG
ATAGAAAACATGCGAAGGGAAGGATATGAATTCATGGTGGGGCCCCCAAAAGTTATCAAC
AAAAGAGTGGATGACAAGTTGCAGGAACCTTTTGAGATTGCCACTGTGGAGGTACCAGAA
GAACACATGGGTTCTGTGGTTGAACTTCTTGGCAAAAGGCGTGGGCAGATGTTTGATATG
CAAGGAGTTGGGTCTGAGGGAACTACACTACTTAAATACAAGATACCAACCCGTGGCCTT
CTTGGATTGCGAAATGCAATTTTAACAGCTTCTCGAGGCACTGCAATTCTCAATACCATA
TTTGATAGCTATGGACCTTGGGCTGGTGATATTACTACCAGGGATCAGGGTTCATTGGTT
GCATTCGAGGAGGGAAGCACAACATCTTATGCCCTTTGTAGTTCACAGGAGAGAGGGCAG
ATGTTCGTTGGACCTGGAGTTGACGTTTATAAAGGGCAAATTGTAGGCATTCATCAGCGT
CCTGGTGACTTATCCCTAAATGTGTGCAAGAAGAAGGCTGCAACAAATGTGCGGTCCAAC
AAGGAACAAACTGTGGTTCTTGACACACCTTTGGATTACAGTCTAGATGACTGCATAGAG
TACATTCAAGAAGATGAGATGGTGGAAGTCACTCCTTTAAGCATCCGAATGTGCAAGAAT
CCAAAACTTGCAAAGAAGACAAGGTAAGGACTCATTGCGTGCCCTGCAGGTCCGCTAACC
GCTTATCCCTCAACTCCCTATAGCATTTCCAAACTTTGAATTTATAGGAGACATAGAGTT
ATGCCAAGTTTTGCTGCAATATTGGATAATTGTATCATGTATTCATTCATGTTGGTATAA
AATGTCAAAGTTTAATCACTAAAGCATATTTTCAAAATTAATAGAAAGAAAA