Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_08s0007g08130.t01
CDS Infomation

cds chromosome:12X:8:21495770:21500496:1 gene:VIT_08s0007g08130 gene_biotype:protein_coding transcript_biotype:protein_coding description:Adenylosuccinate synthetase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TI00]
Sequence

ATGAATATCTCATCCCTAACCCTCGATTCAAATCCCATTTCGAGAACTTTTAGTGCGGCA
AACCCTAGAACACAGAGGTCGCCGTTTATTCGCCACAGAAATGTCGTCGTTTGCTCTGTG
AAGTCCGTTCCTTCATCCCCGTCGTTGGTGGCTGCACCGGCTGGCGAAGGTGTGAACCGG
ATCGAATCGTTGAGTCAAGTCTCTGCAGTTCTGGGATGTCAGTGGGGTGATGAAGGGAAA
GGCAAGCTCGTCGACATCTTGGCCAAACATTTCGACATCGTCGCTCGCTGTCAGGGTGGA
GCTAATGCTGGGCACACTATCTACAATTCAGAGGGCAAGAAGTTTGCTCTTCACCTTGTT
CCCTCAGGAATTCTTAATGAGGAGACAATGTGTGTTATTGGGAATGGTGTTGTGGTGCAT
CTGCCAGGGCTATTTGAAGAAATTGATGGCCTTGAATCTAATGGAGTCTCTTGCAAGGGT
AGGATATTAGTATCTGACCGTGCTCATCTGTTATTTGATTTCCATCAAGTGGTTGATGGG
CTTAGAGAAGCTGAGCTTGCTAAGTCCTTTATTGGTACCACCAAAAGAGGCATTGGACCC
TGTTACTCAAGCAAAGTGATTCGCAATGGCATAAGAGTATGTGACCTCAGGCACATGGAT
ACTTTCCCTCAGAAGCTTGATCTTTTATTATCAGATGCAGCTTCAAGATTCAAAGGTTTT
GAGTATGGGCCAAACATGCTCAAGGAAGAAGTTGAAAAATACAAGAGATTTACTGAGAGG
TTGGAACCCTTCATTACTGATACTGTGGACTTCATGAATGAATCCATTTCACAGAAGAAG
AAGATTTTGGTTGAAGGTGGTCAAGCAACCATGTTGGATATTGACTTTGGAACTTATCCT
TTTGTTACTTCCTCCAGTCCATCTGCAGGTGGGATCTGCACTGGTCTTGGCATTGCCCCA
AGAGTCCTGGGTGATCTAGTTGGAGTGGTAAAAGCATACAATACAAGAGTTGGTTCAGGT
CCTTTTCCAACGGAGAACTTGGGTAGAGTTGGTGACCAACTCAGGTTTGCAGGGCAGGAG
TTTGGCACTACTACTGGTCGTCCTCGTCGTTGTGGCTGGCTAGATATAGTTGCGCTGAAG
TACTCCTGTCAGATTAATGGCTTTTCTTCTCTGAATCTCACCAAGCTTGATGTCTTATCA
GATCTATCCGAAATATGGCTGGGGGTTGGTTACAAAGAAATTGATGGCAAATCAATCAAA
TCTTTCCCTGCAGATCTCCGTGCTCTTGAGCAACTGCAGGTGGAGTATGAAATTTTACCT
GGGTGGAAGACTGATATTTCCGGATTCAAAAACTACTCTGACCTCCCAAAGGCTGCACAG
CAGTATGTGGAAAGGATAGAAGAACTCGTTGGTGTACCCATCCATTACATTGGTGTCGGT
CCCGGGCGCGAAGCCCTTATATACAAATGA

Peptide Sequence

PEP ID

VIT_08s0007g08130.t01
PEP Infomation

pep chromosome:12X:8:21495770:21500496:1 gene:VIT_08s0007g08130 transcript:VIT_08s0007g08130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Adenylosuccinate synthetase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TI00]
Sequence

MNISSLTLDSNPISRTFSAANPRTQRSPFIRHRNVVVCSVKSVPSSPSLVAAPAGEGVNR
IESLSQVSAVLGCQWGDEGKGKLVDILAKHFDIVARCQGGANAGHTIYNSEGKKFALHLV
PSGILNEETMCVIGNGVVVHLPGLFEEIDGLESNGVSCKGRILVSDRAHLLFDFHQVVDG
LREAELAKSFIGTTKRGIGPCYSSKVIRNGIRVCDLRHMDTFPQKLDLLLSDAASRFKGF
EYGPNMLKEEVEKYKRFTERLEPFITDTVDFMNESISQKKKILVEGGQATMLDIDFGTYP
FVTSSSPSAGGICTGLGIAPRVLGDLVGVVKAYNTRVGSGPFPTENLGRVGDQLRFAGQE
FGTTTGRPRRCGWLDIVALKYSCQINGFSSLNLTKLDVLSDLSEIWLGVGYKEIDGKSIK
SFPADLRALEQLQVEYEILPGWKTDISGFKNYSDLPKAAQQYVERIEELVGVPIHYIGVG
PGREALIYK

Transcript Sequence

Transcript ID

VIT_08s0007g08130.t01
Transcript Infomation

cdna chromosome:12X:8:21495770:21500496:1 gene:VIT_08s0007g08130 gene_biotype:protein_coding transcript_biotype:protein_coding description:Adenylosuccinate synthetase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:D7TI00]
Sequence

TTGTCTTAAAACCTCACAGTTTCTCTCTCTAAAATTCTCTCGCTTTTTCTATCTGAACTT
CGCTATGAATATCTCATCCCTAACCCTCGATTCAAATCCCATTTCGAGAACTTTTAGTGC
GGCAAACCCTAGAACACAGAGGTCGCCGTTTATTCGCCACAGAAATGTCGTCGTTTGCTC
TGTGAAGTCCGTTCCTTCATCCCCGTCGTTGGTGGCTGCACCGGCTGGCGAAGGTGTGAA
CCGGATCGAATCGTTGAGTCAAGTCTCTGCAGTTCTGGGATGTCAGTGGGGTGATGAAGG
GAAAGGCAAGCTCGTCGACATCTTGGCCAAACATTTCGACATCGTCGCTCGCTGTCAGGG
TGGAGCTAATGCTGGGCACACTATCTACAATTCAGAGGGCAAGAAGTTTGCTCTTCACCT
TGTTCCCTCAGGAATTCTTAATGAGGAGACAATGTGTGTTATTGGGAATGGTGTTGTGGT
GCATCTGCCAGGGCTATTTGAAGAAATTGATGGCCTTGAATCTAATGGAGTCTCTTGCAA
GGGTAGGATATTAGTATCTGACCGTGCTCATCTGTTATTTGATTTCCATCAAGTGGTTGA
TGGGCTTAGAGAAGCTGAGCTTGCTAAGTCCTTTATTGGTACCACCAAAAGAGGCATTGG
ACCCTGTTACTCAAGCAAAGTGATTCGCAATGGCATAAGAGTATGTGACCTCAGGCACAT
GGATACTTTCCCTCAGAAGCTTGATCTTTTATTATCAGATGCAGCTTCAAGATTCAAAGG
TTTTGAGTATGGGCCAAACATGCTCAAGGAAGAAGTTGAAAAATACAAGAGATTTACTGA
GAGGTTGGAACCCTTCATTACTGATACTGTGGACTTCATGAATGAATCCATTTCACAGAA
GAAGAAGATTTTGGTTGAAGGTGGTCAAGCAACCATGTTGGATATTGACTTTGGAACTTA
TCCTTTTGTTACTTCCTCCAGTCCATCTGCAGGTGGGATCTGCACTGGTCTTGGCATTGC
CCCAAGAGTCCTGGGTGATCTAGTTGGAGTGGTAAAAGCATACAATACAAGAGTTGGTTC
AGGTCCTTTTCCAACGGAGAACTTGGGTAGAGTTGGTGACCAACTCAGGTTTGCAGGGCA
GGAGTTTGGCACTACTACTGGTCGTCCTCGTCGTTGTGGCTGGCTAGATATAGTTGCGCT
GAAGTACTCCTGTCAGATTAATGGCTTTTCTTCTCTGAATCTCACCAAGCTTGATGTCTT
ATCAGATCTATCCGAAATATGGCTGGGGGTTGGTTACAAAGAAATTGATGGCAAATCAAT
CAAATCTTTCCCTGCAGATCTCCGTGCTCTTGAGCAACTGCAGGTGGAGTATGAAATTTT
ACCTGGGTGGAAGACTGATATTTCCGGATTCAAAAACTACTCTGACCTCCCAAAGGCTGC
ACAGCAGTATGTGGAAAGGATAGAAGAACTCGTTGGTGTACCCATCCATTACATTGGTGT
CGGTCCCGGGCGCGAAGCCCTTATATACAAATGATCTTGATTTTTCGCTTTGGAAGCCCC
AAGGGTAGTACATGTTCTCAGAGGTGAGATGGGACGTCTATTGCTGGAAGAATTTATCCC
CCTTAATGATGGGGAGTTAGTTTTGGATAAAAAGAAATGATCACTCCTAATACCTTCTGT
TTAAGAATAATTTGTTCTACATTTGGGAAACCTAAAAAGTTGTTCTACACTGTTAACTTC
ATTACCAATTTACCCTTGTTAGGGATCTTGATGTGTAATCAAATTTTCAATTATTGATTT
GCACA